RNA–Protein interactions for RNA: ENST00000409530.5

SHANK2-204, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 2,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-204ENST00000409530 MDN1Q9NU22 5596 aa5.65□□□□□ -1.51
SHANK2-204ENST00000409530 SPRR5A0A1B0GTR4 108 aa5.64□□□□□ -1.51
SHANK2-204ENST00000409530 KRTAP5-9P26371 169 aa5.62□□□□□ -1.51
SHANK2-204ENST00000409530 KRTAP9-7A8MTY7 169 aa5.6□□□□□ -1.51
SHANK2-204ENST00000409530 KRTAP6-3Q3LI67 103 aa5.6□□□□□ -1.51
SHANK2-204ENST00000409530 MT1LQ93083 61 aa5.57□□□□□ -1.52
SHANK2-204ENST00000409530 SPRR2EP22531 72 aa5.53□□□□□ -1.52
SHANK2-204ENST00000409530 SPRR2BP35325 72 aa5.53□□□□□ -1.52
SHANK2-204ENST00000409530 SPRR2AP35326 72 aa5.53□□□□□ -1.52
SHANK2-204ENST00000409530 KRTAP19-3Q7Z4W3 81 aa5.51□□□□□ -1.53
SHANK2-204ENST00000409530 KRTAP4-7Q9BYR0 210 aa5.5□□□□□ -1.53
SHANK2-204ENST00000409530 LCE1AQ5T7P2 110 aa5.48□□□□□ -1.53
SHANK2-204ENST00000409530 LCE3CQ5T5A8 94 aa5.41□□□□□ -1.54
SHANK2-204ENST00000409530 MT1GP13640 62 aa5.41□□□□□ -1.54
SHANK2-204ENST00000409530 LCE5AQ5TCM9 118 aa5.41□□□□□ -1.54
SHANK2-204ENST00000409530 MT1MQ8N339 61 aa5.39□□□□□ -1.55
SHANK2-204ENST00000409530 KRTAP4-3Q9BYR4 195 aa5.39□□□□□ -1.55
SHANK2-204ENST00000409530 DSTQ03001 7570 aaKnown RBP5.37□□□□□ -1.55
SHANK2-204ENST00000409530 INE1O15225 51 aa5.36□□□□□ -1.55
SHANK2-204ENST00000409530 SPRR2DP22532 72 aa5.32□□□□□ -1.56
SHANK2-204ENST00000409530 NEBP20929 6669 aa5.31□□□□□ -1.56
SHANK2-204ENST00000409530 KRTAP19-4Q3LI73 84 aa5.21□□□□□ -1.58
SHANK2-204ENST00000409530 LOC100996750A0A140TA64 210 aa5.17□□□□□ -1.58
SHANK2-204ENST00000409530 KRTAP9-6A8MVA2 160 aa5.17□□□□□ -1.58
SHANK2-204ENST00000409530 LCE3BQ5TA77 95 aa5.1□□□□□ -1.59
SHANK2-204ENST00000409530 KRTAP20-1Q3LI63 56 aa4.95□□□□□ -1.62
SHANK2-204ENST00000409530 KRTAP2-3P0C7H8 128 aa4.93□□□□□ -1.62
SHANK2-204ENST00000409530 KRTAP2-4Q9BYR9 128 aa4.93□□□□□ -1.62
SHANK2-204ENST00000409530 KRTAP2-2Q9BYT5 123 aa4.82□□□□□ -1.64
SHANK2-204ENST00000409530 KRTAP2-1Q9BYU5 128 aa4.82□□□□□ -1.64
SHANK2-204ENST00000409530 KRTAP5-5Q701N2 237 aaPredicted RBP4.82□□□□□ -1.64
SHANK2-204ENST00000409530 KRTAP6-1Q3LI64 71 aa4.74□□□□□ -1.65
SHANK2-204ENST00000409530 MT1AP04731 61 aa4.7□□□□□ -1.66
SHANK2-204ENST00000409530 MT4P47944 62 aa4.69□□□□□ -1.66
SHANK2-204ENST00000409530 SYNE1Q8NF91 8797 aaKnown RBP4.68□□□□□ -1.66
SHANK2-204ENST00000409530 KRTAP4-9Q9BYQ8 210 aa4.68□□□□□ -1.66
SHANK2-204ENST00000409530 KRTAP5-4Q6L8H1 288 aa4.64□□□□□ -1.67
SHANK2-204ENST00000409530 LCE4AQ5TA78 99 aa4.6□□□□□ -1.67
SHANK2-204ENST00000409530 KRTAP4-6Q9BYQ5 205 aa4.58□□□□□ -1.68
SHANK2-204ENST00000409530 LCE1DQ5T752 114 aa4.56□□□□□ -1.68
SHANK2-204ENST00000409530 KRTAP12-4P60329 112 aa4.55□□□□□ -1.68
SHANK2-204ENST00000409530 HMCN1Q96RW7 5635 aa4.54□□□□□ -1.68
SHANK2-204ENST00000409530 KRTAP9-4Q9BYQ2 154 aa4.48□□□□□ -1.69
SHANK2-204ENST00000409530 KRTAP20-2Q3LI61 65 aa4.42□□□□□ -1.7
SHANK2-204ENST00000409530 KRTAP6-2Q3LI66 62 aa4.4□□□□□ -1.7
SHANK2-204ENST00000409530 OBSCNQ5VST9 7968 aa4.27□□□□□ -1.73
SHANK2-204ENST00000409530 MT3P25713 68 aa4.27□□□□□ -1.73
SHANK2-204ENST00000409530 KRTAP5-3Q6L8H2 238 aa4.22□□□□□ -1.73
SHANK2-204ENST00000409530 KRTAP5-2Q701N4 177 aa4.19□□□□□ -1.74
SHANK2-204ENST00000409530 LCE3DQ9BYE3 92 aa4.05□□□□□ -1.76
SHANK2-204ENST00000409530 AHNAK2Q8IVF2 5795 aa4.05□□□□□ -1.76
SHANK2-204ENST00000409530 GPR98Q8WXG9 6306 aa3.92□□□□□ -1.78
SHANK2-204ENST00000409530 LCE1FQ5T754 118 aa3.92□□□□□ -1.78
SHANK2-204ENST00000409530 LCE3EQ5T5B0 92 aa3.91□□□□□ -1.78
SHANK2-204ENST00000409530 KRTAP9-9Q9BYP9 154 aa3.89□□□□□ -1.79
SHANK2-204ENST00000409530 KRTAP4-11Q9BYQ6 195 aa3.86□□□□□ -1.79
SHANK2-204ENST00000409530 KRTAP5-10Q6L8G5 202 aa3.81□□□□□ -1.8
SHANK2-204ENST00000409530 KRTAP5-8O75690 187 aa3.71□□□□□ -1.82
SHANK2-204ENST00000409530 KRTAP5-1Q6L8H4 278 aa3.67□□□□□ -1.82
SHANK2-204ENST00000409530 LCE1EQ5T753 118 aa3.66□□□□□ -1.82
SHANK2-204ENST00000409530 LCE1BQ5T7P3 118 aa3.64□□□□□ -1.83
SHANK2-204ENST00000409530 PRM1P04553 51 aa3.61□□□□□ -1.83
SHANK2-204ENST00000409530 MUC5ACP98088 5654 aa3.57□□□□□ -1.84
SHANK2-204ENST00000409530 KRTAP5-7Q6L8G8 165 aa3.53□□□□□ -1.84
SHANK2-204ENST00000409530 KRTAP4-2Q9BYR5 136 aa3.5□□□□□ -1.85
SHANK2-204ENST00000409530 LCE1CQ5T751 118 aa3.44□□□□□ -1.86
SHANK2-204ENST00000409530 MUC5BQ9HC84 5762 aaPredicted RBP3.32□□□□□ -1.88
SHANK2-204ENST00000409530 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.16□□□□□ -1.9
SHANK2-204ENST00000409530 KRTAP4-12Q9BQ66 201 aa3.08□□□□□ -1.92
SHANK2-204ENST00000409530 AHNAKQ09666 5890 aaKnown RBP3.07□□□□□ -1.92
SHANK2-204ENST00000409530 KRTAP21-2Q3LI59 83 aa3.06□□□□□ -1.92
SHANK2-204ENST00000409530 KRTAP5-11Q6L8G4 156 aa3.05□□□□□ -1.92
SHANK2-204ENST00000409530 KRTAP4-4Q9BYR3 166 aa2.88□□□□□ -1.95
SHANK2-204ENST00000409530 PHGR1C9JFL3 82 aa2.64□□□□□ -1.99
SHANK2-204ENST00000409530 MUC19Q7Z5P9 8384 aa2.55□□□□□ -2
SHANK2-204ENST00000409530 KRTAP21-1Q3LI58 79 aa2.33□□□□□ -2.04
SHANK2-204ENST00000409530 MUC16Q8WXI7 14507 aa1.66□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 6.1 ms