RNA–Protein interactions for RNA: ENST00000409364.3

GTF3C3-202, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GTF3C3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-202ENST00000409364 MT1FP04733 61 aa2.74□□□□□ -1.97
GTF3C3-202ENST00000409364 PLAC4Q8WY50 150 aa2.73□□□□□ -1.97
GTF3C3-202ENST00000409364 C10orf95Q9H7T3 257 aa2.72□□□□□ -1.97
GTF3C3-202ENST00000409364 KRTAP19-8Q3LI54 63 aa2.68□□□□□ -1.98
GTF3C3-202ENST00000409364 TNP1P09430 55 aa2.65□□□□□ -1.98
GTF3C3-202ENST00000409364 PP632Q6XCG6 107 aa2.65□□□□□ -1.99
GTF3C3-202ENST00000409364 KRTAP9-6A8MVA2 160 aa2.64□□□□□ -1.99
GTF3C3-202ENST00000409364 PRO2289Q9P1D8 64 aa2.64□□□□□ -1.99
GTF3C3-202ENST00000409364 MT1BP07438 61 aa2.62□□□□□ -1.99
GTF3C3-202ENST00000409364 KRTAP5-8O75690 187 aa2.58□□□□□ -2
GTF3C3-202ENST00000409364 KRTAP10-5P60370 271 aa2.56□□□□□ -2
GTF3C3-202ENST00000409364 MT1XP80297 61 aa2.56□□□□□ -2
GTF3C3-202ENST00000409364 LCE3AQ5TA76 89 aa2.48□□□□□ -2.01
GTF3C3-202ENST00000409364 USH2AO75445 5202 aa2.47□□□□□ -2.01
GTF3C3-202ENST00000409364 KRTAP10-12P60413 245 aa2.47□□□□□ -2.01
GTF3C3-202ENST00000409364 KRTAP8-1Q8IUC2 63 aa2.46□□□□□ -2.02
GTF3C3-202ENST00000409364 SSPOA2VEC9 5147 aa2.43□□□□□ -2.02
GTF3C3-202ENST00000409364 INE1O15225 51 aa2.42□□□□□ -2.02
GTF3C3-202ENST00000409364 FSIP2Q5CZC0 6907 aa2.42□□□□□ -2.02
GTF3C3-202ENST00000409364 KRTAP12-3P60328 96 aa2.4□□□□□ -2.02
GTF3C3-202ENST00000409364 KRTAP19-6Q3LI70 58 aa2.4□□□□□ -2.02
GTF3C3-202ENST00000409364 CRCT1Q9UGL9 99 aa2.39□□□□□ -2.03
GTF3C3-202ENST00000409364 SPRR5A0A1B0GTR4 108 aa2.34□□□□□ -2.03
GTF3C3-202ENST00000409364 KRTAP19-5Q3LI72 72 aa2.34□□□□□ -2.04
GTF3C3-202ENST00000409364 FCGBPQ9Y6R7 5405 aaPredicted RBP2.33□□□□□ -2.04
GTF3C3-202ENST00000409364 MT3P25713 68 aa2.3□□□□□ -2.04
GTF3C3-202ENST00000409364 KRTAP19-7Q3SYF9 63 aa2.28□□□□□ -2.04
GTF3C3-202ENST00000409364 LCE3CQ5T5A8 94 aa2.25□□□□□ -2.05
GTF3C3-202ENST00000409364 KMT2DO14686 5537 aa2.25□□□□□ -2.05
GTF3C3-202ENST00000409364 MT1EP04732 61 aa2.24□□□□□ -2.05
GTF3C3-202ENST00000409364 MT1LQ93083 61 aa2.21□□□□□ -2.06
GTF3C3-202ENST00000409364 MACF1Q9UPN3 7388 aaKnown RBP2.18□□□□□ -2.06
GTF3C3-202ENST00000409364 MT1GP13640 62 aa2.16□□□□□ -2.06
GTF3C3-202ENST00000409364 KRTAP19-3Q7Z4W3 81 aa2.14□□□□□ -2.07
GTF3C3-202ENST00000409364 SPRR2FQ96RM1 72 aa2.14□□□□□ -2.07
GTF3C3-202ENST00000409364 KRTAP6-3Q3LI67 103 aa2.11□□□□□ -2.07
GTF3C3-202ENST00000409364 MT1MQ8N339 61 aa2.1□□□□□ -2.07
GTF3C3-202ENST00000409364 SYNE2Q8WXH0 6885 aaKnown RBP2.09□□□□□ -2.08
GTF3C3-202ENST00000409364 MUC12Q9UKN1 5478 aa2.08□□□□□ -2.08
GTF3C3-202ENST00000409364 LCE1CQ5T751 118 aa2.06□□□□□ -2.08
GTF3C3-202ENST00000409364 LCE1BQ5T7P3 118 aa2.06□□□□□ -2.08
GTF3C3-202ENST00000409364 HMCN1Q96RW7 5635 aa2.05□□□□□ -2.08
GTF3C3-202ENST00000409364 SPRR2EP22531 72 aa2.02□□□□□ -2.09
GTF3C3-202ENST00000409364 SPRR2BP35325 72 aa2.02□□□□□ -2.09
GTF3C3-202ENST00000409364 SPRR2AP35326 72 aa2.02□□□□□ -2.09
GTF3C3-202ENST00000409364 KRTAP5-5Q701N2 237 aaPredicted RBP2.02□□□□□ -2.09
GTF3C3-202ENST00000409364 KRTAP2-3P0C7H8 128 aa2.01□□□□□ -2.09
GTF3C3-202ENST00000409364 KRTAP2-4Q9BYR9 128 aa2.01□□□□□ -2.09
GTF3C3-202ENST00000409364 KRTAP2-1Q9BYU5 128 aa2.01□□□□□ -2.09
GTF3C3-202ENST00000409364 MDN1Q9NU22 5596 aa2.01□□□□□ -2.09
GTF3C3-202ENST00000409364 LCE1FQ5T754 118 aa1.99□□□□□ -2.09
GTF3C3-202ENST00000409364 SPRR2DP22532 72 aa1.94□□□□□ -2.1
GTF3C3-202ENST00000409364 NEBP20929 6669 aa1.93□□□□□ -2.1
GTF3C3-202ENST00000409364 DSTQ03001 7570 aaKnown RBP1.89□□□□□ -2.11
GTF3C3-202ENST00000409364 MT1AP04731 61 aa1.88□□□□□ -2.11
GTF3C3-202ENST00000409364 KRTAP20-1Q3LI63 56 aa1.87□□□□□ -2.11
GTF3C3-202ENST00000409364 KRTAP6-1Q3LI64 71 aa1.86□□□□□ -2.11
GTF3C3-202ENST00000409364 KRTAP12-4P60329 112 aa1.77□□□□□ -2.13
GTF3C3-202ENST00000409364 MUC19Q7Z5P9 8384 aa1.74□□□□□ -2.13
GTF3C3-202ENST00000409364 SYNE1Q8NF91 8797 aaKnown RBP1.73□□□□□ -2.13
GTF3C3-202ENST00000409364 LCE3DQ9BYE3 92 aa1.72□□□□□ -2.13
GTF3C3-202ENST00000409364 MT4P47944 62 aa1.71□□□□□ -2.14
GTF3C3-202ENST00000409364 LCE3EQ5T5B0 92 aa1.71□□□□□ -2.14
GTF3C3-202ENST00000409364 KRTAP6-2Q3LI66 62 aa1.7□□□□□ -2.14
GTF3C3-202ENST00000409364 KRTAP20-2Q3LI61 65 aa1.64□□□□□ -2.15
GTF3C3-202ENST00000409364 KRTAP5-7Q6L8G8 165 aa1.57□□□□□ -2.16
GTF3C3-202ENST00000409364 AHNAK2Q8IVF2 5795 aa1.51□□□□□ -2.17
GTF3C3-202ENST00000409364 PRM1P04553 51 aa1.49□□□□□ -2.17
GTF3C3-202ENST00000409364 KRTAP21-2Q3LI59 83 aa1.49□□□□□ -2.17
GTF3C3-202ENST00000409364 KRTAP5-10Q6L8G5 202 aa1.48□□□□□ -2.17
GTF3C3-202ENST00000409364 GPR98Q8WXG9 6306 aa1.42□□□□□ -2.18
GTF3C3-202ENST00000409364 MUC5ACP98088 5654 aa1.34□□□□□ -2.2
GTF3C3-202ENST00000409364 MUC5BQ9HC84 5762 aaPredicted RBP1.22□□□□□ -2.21
GTF3C3-202ENST00000409364 AHNAKQ09666 5890 aaKnown RBP1.15□□□□□ -2.23
GTF3C3-202ENST00000409364 PHGR1C9JFL3 82 aa1.02□□□□□ -2.25
GTF3C3-202ENST00000409364 KRTAP21-1Q3LI58 79 aa0.95□□□□□ -2.26
GTF3C3-202ENST00000409364 MUC16Q8WXI7 14507 aa0.65□□□□□ -2.31
Retrieved 77 of 20,778 RNA–protein pairs in 167.2 ms