RNA–Protein interactions for RNA: ENST00000409064.5

KDM3A-202, Transcript of lysine demethylase 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM3A, Length 4,621 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-202ENST00000409064 KRTAP19-6Q3LI70 58 aa3.51□□□□□ -1.85
KDM3A-202ENST00000409064 SYNE2Q8WXH0 6885 aaKnown RBP3.48□□□□□ -1.85
KDM3A-202ENST00000409064 LCE3BQ5TA77 95 aa3.47□□□□□ -1.85
KDM3A-202ENST00000409064 KRTAP19-3Q7Z4W3 81 aa3.46□□□□□ -1.86
KDM3A-202ENST00000409064 KRTAP9-7A8MTY7 169 aa3.43□□□□□ -1.86
KDM3A-202ENST00000409064 OBSCNQ5VST9 7968 aa3.39□□□□□ -1.87
KDM3A-202ENST00000409064 MT1EP04732 61 aa3.37□□□□□ -1.87
KDM3A-202ENST00000409064 MT4P47944 62 aa3.36□□□□□ -1.87
KDM3A-202ENST00000409064 KRTAP4-7Q9BYR0 210 aa3.35□□□□□ -1.87
KDM3A-202ENST00000409064 MT1LQ93083 61 aa3.35□□□□□ -1.87
KDM3A-202ENST00000409064 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.29□□□□□ -1.88
KDM3A-202ENST00000409064 MACF1Q9UPN3 7388 aaKnown RBP3.28□□□□□ -1.88
KDM3A-202ENST00000409064 KRTAP20-1Q3LI63 56 aa3.28□□□□□ -1.88
KDM3A-202ENST00000409064 MT1MQ8N339 61 aa3.28□□□□□ -1.89
KDM3A-202ENST00000409064 DSTQ03001 7570 aaKnown RBP3.27□□□□□ -1.89
KDM3A-202ENST00000409064 KMT2DO14686 5537 aa3.25□□□□□ -1.89
KDM3A-202ENST00000409064 KRTAP6-3Q3LI67 103 aa3.23□□□□□ -1.89
KDM3A-202ENST00000409064 KRTAP4-3Q9BYR4 195 aa3.21□□□□□ -1.89
KDM3A-202ENST00000409064 KRTAP19-7Q3SYF9 63 aa3.21□□□□□ -1.9
KDM3A-202ENST00000409064 KRTAP2-3P0C7H8 128 aa3.19□□□□□ -1.9
KDM3A-202ENST00000409064 KRTAP2-4Q9BYR9 128 aa3.19□□□□□ -1.9
KDM3A-202ENST00000409064 KRTAP2-1Q9BYU5 128 aa3.19□□□□□ -1.9
KDM3A-202ENST00000409064 KRTAP9-6A8MVA2 160 aa3.18□□□□□ -1.9
KDM3A-202ENST00000409064 USH2AO75445 5202 aa3.17□□□□□ -1.9
KDM3A-202ENST00000409064 LCE3DQ9BYE3 92 aa3.17□□□□□ -1.9
KDM3A-202ENST00000409064 LOC100996750A0A140TA64 210 aa3.14□□□□□ -1.91
KDM3A-202ENST00000409064 FCGBPQ9Y6R7 5405 aaPredicted RBP3.14□□□□□ -1.91
KDM3A-202ENST00000409064 MT3P25713 68 aa3.13□□□□□ -1.91
KDM3A-202ENST00000409064 LCE1AQ5T7P2 110 aa3.1□□□□□ -1.91
KDM3A-202ENST00000409064 LCE3EQ5T5B0 92 aa3.08□□□□□ -1.92
KDM3A-202ENST00000409064 KRTAP2-2Q9BYT5 123 aa3.06□□□□□ -1.92
KDM3A-202ENST00000409064 LCE1DQ5T752 114 aa3.05□□□□□ -1.92
KDM3A-202ENST00000409064 LCE1BQ5T7P3 118 aa3.04□□□□□ -1.92
KDM3A-202ENST00000409064 KRTAP4-9Q9BYQ8 210 aa3.04□□□□□ -1.92
KDM3A-202ENST00000409064 MDN1Q9NU22 5596 aa3.01□□□□□ -1.93
KDM3A-202ENST00000409064 MT1AP04731 61 aa2.97□□□□□ -1.93
KDM3A-202ENST00000409064 GPR98Q8WXG9 6306 aa2.97□□□□□ -1.93
KDM3A-202ENST00000409064 LCE5AQ5TCM9 118 aa2.94□□□□□ -1.94
KDM3A-202ENST00000409064 NEBP20929 6669 aa2.94□□□□□ -1.94
KDM3A-202ENST00000409064 LCE4AQ5TA78 99 aa2.91□□□□□ -1.94
KDM3A-202ENST00000409064 SSPOA2VEC9 5147 aa2.89□□□□□ -1.95
KDM3A-202ENST00000409064 MUC12Q9UKN1 5478 aa2.86□□□□□ -1.95
KDM3A-202ENST00000409064 KRTAP6-2Q3LI66 62 aa2.83□□□□□ -1.96
KDM3A-202ENST00000409064 KRTAP6-1Q3LI64 71 aa2.82□□□□□ -1.96
KDM3A-202ENST00000409064 PRM1P04553 51 aa2.77□□□□□ -1.97
KDM3A-202ENST00000409064 KRTAP5-9P26371 169 aa2.75□□□□□ -1.97
KDM3A-202ENST00000409064 KRTAP9-4Q9BYQ2 154 aa2.74□□□□□ -1.97
KDM3A-202ENST00000409064 MUC19Q7Z5P9 8384 aa2.68□□□□□ -1.98
KDM3A-202ENST00000409064 KRTAP4-6Q9BYQ5 205 aa2.6□□□□□ -1.99
KDM3A-202ENST00000409064 LCE1CQ5T751 118 aa2.59□□□□□ -1.99
KDM3A-202ENST00000409064 LCE1EQ5T753 118 aa2.59□□□□□ -1.99
KDM3A-202ENST00000409064 LCE1FQ5T754 118 aa2.59□□□□□ -1.99
KDM3A-202ENST00000409064 KRTAP9-9Q9BYP9 154 aa2.57□□□□□ -2
KDM3A-202ENST00000409064 KRTAP20-2Q3LI61 65 aa2.5□□□□□ -2.01
KDM3A-202ENST00000409064 KRTAP5-5Q701N2 237 aaPredicted RBP2.47□□□□□ -2.01
KDM3A-202ENST00000409064 KRTAP4-11Q9BYQ6 195 aa2.32□□□□□ -2.04
KDM3A-202ENST00000409064 MUC5ACP98088 5654 aa2.32□□□□□ -2.04
KDM3A-202ENST00000409064 KRTAP5-4Q6L8H1 288 aa2.3□□□□□ -2.04
KDM3A-202ENST00000409064 HMCN1Q96RW7 5635 aa2.28□□□□□ -2.04
KDM3A-202ENST00000409064 AHNAK2Q8IVF2 5795 aa2.25□□□□□ -2.05
KDM3A-202ENST00000409064 KRTAP5-3Q6L8H2 238 aa2.24□□□□□ -2.05
KDM3A-202ENST00000409064 KRTAP4-12Q9BQ66 201 aa2.23□□□□□ -2.05
KDM3A-202ENST00000409064 KRTAP4-2Q9BYR5 136 aa2.23□□□□□ -2.05
KDM3A-202ENST00000409064 KRTAP4-4Q9BYR3 166 aa2.13□□□□□ -2.07
KDM3A-202ENST00000409064 KRTAP5-8O75690 187 aa2.01□□□□□ -2.09
KDM3A-202ENST00000409064 KRTAP5-2Q701N4 177 aa1.94□□□□□ -2.1
KDM3A-202ENST00000409064 AHNAKQ09666 5890 aaKnown RBP1.91□□□□□ -2.1
KDM3A-202ENST00000409064 KRTAP5-10Q6L8G5 202 aa1.87□□□□□ -2.11
KDM3A-202ENST00000409064 MUC5BQ9HC84 5762 aaPredicted RBP1.8□□□□□ -2.12
KDM3A-202ENST00000409064 PHGR1C9JFL3 82 aa1.75□□□□□ -2.13
KDM3A-202ENST00000409064 KRTAP5-1Q6L8H4 278 aa1.72□□□□□ -2.13
KDM3A-202ENST00000409064 KRTAP21-2Q3LI59 83 aa1.64□□□□□ -2.15
KDM3A-202ENST00000409064 KRTAP5-7Q6L8G8 165 aa1.61□□□□□ -2.15
KDM3A-202ENST00000409064 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.6□□□□□ -2.15
KDM3A-202ENST00000409064 KRTAP5-11Q6L8G4 156 aa1.6□□□□□ -2.15
KDM3A-202ENST00000409064 KRTAP21-1Q3LI58 79 aa1.56□□□□□ -2.16
KDM3A-202ENST00000409064 MUC16Q8WXI7 14507 aa1.02□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 114 ms