RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 MT1BP07438 61 aa4.34□□□□□ -1.71
NIF3L1-202ENST00000409020 PP632Q6XCG6 107 aa4.34□□□□□ -1.71
NIF3L1-202ENST00000409020 SPRR2GQ9BYE4 73 aa4.31□□□□□ -1.72
NIF3L1-202ENST00000409020 KRTAP19-8Q3LI54 63 aa4.29□□□□□ -1.72
NIF3L1-202ENST00000409020 MDN1Q9NU22 5596 aa4.29□□□□□ -1.72
NIF3L1-202ENST00000409020 SPRR5A0A1B0GTR4 108 aa4.29□□□□□ -1.72
NIF3L1-202ENST00000409020 KRTAP6-3Q3LI67 103 aa4.29□□□□□ -1.72
NIF3L1-202ENST00000409020 KMT2DO14686 5537 aa4.27□□□□□ -1.73
NIF3L1-202ENST00000409020 M0QZ58 72 aa4.24□□□□□ -1.73
NIF3L1-202ENST00000409020 KRTAP10-5P60370 271 aa4.22□□□□□ -1.73
NIF3L1-202ENST00000409020 LCE1AQ5T7P2 110 aa4.2□□□□□ -1.74
NIF3L1-202ENST00000409020 KRTAP5-9P26371 169 aa4.09□□□□□ -1.76
NIF3L1-202ENST00000409020 MT1XP80297 61 aa4.06□□□□□ -1.76
NIF3L1-202ENST00000409020 KRTAP20-1Q3LI63 56 aa3.99□□□□□ -1.77
NIF3L1-202ENST00000409020 SPRR2FQ96RM1 72 aa3.97□□□□□ -1.77
NIF3L1-202ENST00000409020 KRTAP8-1Q8IUC2 63 aa3.92□□□□□ -1.78
NIF3L1-202ENST00000409020 SPRR2EP22531 72 aa3.91□□□□□ -1.78
NIF3L1-202ENST00000409020 SPRR2BP35325 72 aa3.91□□□□□ -1.78
NIF3L1-202ENST00000409020 SPRR2AP35326 72 aa3.91□□□□□ -1.78
NIF3L1-202ENST00000409020 KRTAP10-7P60409 375 aaPredicted RBP3.9□□□□□ -1.79
NIF3L1-202ENST00000409020 KRTAP2-2Q9BYT5 123 aa3.86□□□□□ -1.79
NIF3L1-202ENST00000409020 KRTAP2-3P0C7H8 128 aa3.85□□□□□ -1.79
NIF3L1-202ENST00000409020 KRTAP2-4Q9BYR9 128 aa3.85□□□□□ -1.79
NIF3L1-202ENST00000409020 MT3P25713 68 aa3.83□□□□□ -1.8
NIF3L1-202ENST00000409020 KRTAP10-12P60413 245 aa3.83□□□□□ -1.8
NIF3L1-202ENST00000409020 SPRR2DP22532 72 aa3.78□□□□□ -1.8
NIF3L1-202ENST00000409020 TNP1P09430 55 aa3.77□□□□□ -1.81
NIF3L1-202ENST00000409020 KRTAP2-1Q9BYU5 128 aa3.74□□□□□ -1.81
NIF3L1-202ENST00000409020 LCE1FQ5T754 118 aa3.72□□□□□ -1.81
NIF3L1-202ENST00000409020 DSTQ03001 7570 aaKnown RBP3.72□□□□□ -1.81
NIF3L1-202ENST00000409020 KRTAP19-7Q3SYF9 63 aa3.64□□□□□ -1.83
NIF3L1-202ENST00000409020 MT1EP04732 61 aa3.6□□□□□ -1.83
NIF3L1-202ENST00000409020 GPR98Q8WXG9 6306 aa3.57□□□□□ -1.84
NIF3L1-202ENST00000409020 KRTAP19-3Q7Z4W3 81 aa3.55□□□□□ -1.84
NIF3L1-202ENST00000409020 KRTAP19-5Q3LI72 72 aa3.53□□□□□ -1.84
NIF3L1-202ENST00000409020 HMCN1Q96RW7 5635 aa3.5□□□□□ -1.85
NIF3L1-202ENST00000409020 LCE3CQ5T5A8 94 aa3.48□□□□□ -1.85
NIF3L1-202ENST00000409020 MT1GP13640 62 aa3.43□□□□□ -1.86
NIF3L1-202ENST00000409020 LCE3AQ5TA76 89 aa3.43□□□□□ -1.86
NIF3L1-202ENST00000409020 MT1MQ8N339 61 aa3.43□□□□□ -1.86
NIF3L1-202ENST00000409020 MT1LQ93083 61 aa3.43□□□□□ -1.86
NIF3L1-202ENST00000409020 KRTAP4-3Q9BYR4 195 aa3.41□□□□□ -1.86
NIF3L1-202ENST00000409020 AHNAK2Q8IVF2 5795 aa3.35□□□□□ -1.87
NIF3L1-202ENST00000409020 MT4P47944 62 aa3.34□□□□□ -1.87
NIF3L1-202ENST00000409020 KRTAP5-4Q6L8H1 288 aa3.27□□□□□ -1.89
NIF3L1-202ENST00000409020 KRTAP12-3P60328 96 aa3.27□□□□□ -1.89
NIF3L1-202ENST00000409020 LCE3EQ5T5B0 92 aa3.19□□□□□ -1.9
NIF3L1-202ENST00000409020 SYNE1Q8NF91 8797 aaKnown RBP3.18□□□□□ -1.9
NIF3L1-202ENST00000409020 LCE1EQ5T753 118 aa3.17□□□□□ -1.9
NIF3L1-202ENST00000409020 KRTAP5-10Q6L8G5 202 aa3.15□□□□□ -1.9
NIF3L1-202ENST00000409020 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.15□□□□□ -1.9
NIF3L1-202ENST00000409020 KRTAP5-5Q701N2 237 aaPredicted RBP3.15□□□□□ -1.9
NIF3L1-202ENST00000409020 KRTAP20-2Q3LI61 65 aa3.11□□□□□ -1.91
NIF3L1-202ENST00000409020 KRTAP5-11Q6L8G4 156 aa3.07□□□□□ -1.92
NIF3L1-202ENST00000409020 KRTAP12-4P60329 112 aa3.01□□□□□ -1.93
NIF3L1-202ENST00000409020 KRTAP5-7Q6L8G8 165 aa3□□□□□ -1.93
NIF3L1-202ENST00000409020 KRTAP9-6A8MVA2 160 aa2.98□□□□□ -1.93
NIF3L1-202ENST00000409020 KRTAP6-1Q3LI64 71 aa2.92□□□□□ -1.94
NIF3L1-202ENST00000409020 MT1AP04731 61 aa2.88□□□□□ -1.95
NIF3L1-202ENST00000409020 KRTAP5-2Q701N4 177 aa2.87□□□□□ -1.95
NIF3L1-202ENST00000409020 OBSCNQ5VST9 7968 aa2.85□□□□□ -1.95
NIF3L1-202ENST00000409020 MUC5BQ9HC84 5762 aaPredicted RBP2.82□□□□□ -1.96
NIF3L1-202ENST00000409020 KRTAP6-2Q3LI66 62 aa2.79□□□□□ -1.96
NIF3L1-202ENST00000409020 AHNAKQ09666 5890 aaKnown RBP2.78□□□□□ -1.96
NIF3L1-202ENST00000409020 KRTAP5-8O75690 187 aa2.76□□□□□ -1.97
NIF3L1-202ENST00000409020 MUC5ACP98088 5654 aa2.73□□□□□ -1.97
NIF3L1-202ENST00000409020 LCE3DQ9BYE3 92 aa2.73□□□□□ -1.97
NIF3L1-202ENST00000409020 PRM1P04553 51 aa2.69□□□□□ -1.98
NIF3L1-202ENST00000409020 KRTAP5-1Q6L8H4 278 aa2.59□□□□□ -2
NIF3L1-202ENST00000409020 KRTAP4-4Q9BYR3 166 aa2.54□□□□□ -2
NIF3L1-202ENST00000409020 LCE1BQ5T7P3 118 aa2.33□□□□□ -2.04
NIF3L1-202ENST00000409020 LCE1CQ5T751 118 aa2.25□□□□□ -2.05
NIF3L1-202ENST00000409020 KRTAP21-2Q3LI59 83 aa1.93□□□□□ -2.1
NIF3L1-202ENST00000409020 KRTAP21-1Q3LI58 79 aa1.89□□□□□ -2.11
NIF3L1-202ENST00000409020 PHGR1C9JFL3 82 aa1.83□□□□□ -2.12
NIF3L1-202ENST00000409020 MUC19Q7Z5P9 8384 aa1.79□□□□□ -2.12
NIF3L1-202ENST00000409020 MUC16Q8WXI7 14507 aa1.11□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 76.7 ms