RNA–Protein interactions for RNA: ENST00000407144.6

CUEDC1-202, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CUEDC1, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-202ENST00000407144 KRTAP4-7Q9BYR0 210 aa7.47□□□□□ -1.21
CUEDC1-202ENST00000407144 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.47□□□□□ -1.21
CUEDC1-202ENST00000407144 KRTAP19-7Q3SYF9 63 aa7.44□□□□□ -1.22
CUEDC1-202ENST00000407144 KRTAP4-8A0A0G2JLE6 195 aa7.39□□□□□ -1.23
CUEDC1-202ENST00000407144 KRTAP4-8Q9BYQ9 185 aa7.39□□□□□ -1.23
CUEDC1-202ENST00000407144 KRTAP12-4P60329 112 aa7.35□□□□□ -1.23
CUEDC1-202ENST00000407144 KMT2DO14686 5537 aa7.32□□□□□ -1.24
CUEDC1-202ENST00000407144 MT1LQ93083 61 aa7.31□□□□□ -1.24
CUEDC1-202ENST00000407144 KRTAP9-7A8MTY7 169 aa7.25□□□□□ -1.25
CUEDC1-202ENST00000407144 MT1EP04732 61 aa7.17□□□□□ -1.26
CUEDC1-202ENST00000407144 MUC12Q9UKN1 5478 aa7.09□□□□□ -1.28
CUEDC1-202ENST00000407144 KRTAP6-3Q3LI67 103 aa7.03□□□□□ -1.28
CUEDC1-202ENST00000407144 MDN1Q9NU22 5596 aa6.96□□□□□ -1.29
CUEDC1-202ENST00000407144 LOC100996750A0A140TA64 210 aa6.92□□□□□ -1.3
CUEDC1-202ENST00000407144 KRTAP5-9P26371 169 aa6.91□□□□□ -1.3
CUEDC1-202ENST00000407144 MT1GP13640 62 aa6.83□□□□□ -1.32
CUEDC1-202ENST00000407144 NEBP20929 6669 aa6.83□□□□□ -1.32
CUEDC1-202ENST00000407144 SPRR2FQ96RM1 72 aa6.82□□□□□ -1.32
CUEDC1-202ENST00000407144 KRTAP4-3Q9BYR4 195 aa6.74□□□□□ -1.33
CUEDC1-202ENST00000407144 MT1AP04731 61 aa6.72□□□□□ -1.33
CUEDC1-202ENST00000407144 MT1MQ8N339 61 aa6.63□□□□□ -1.35
CUEDC1-202ENST00000407144 SPRR2EP22531 72 aa6.61□□□□□ -1.35
CUEDC1-202ENST00000407144 SPRR2BP35325 72 aa6.61□□□□□ -1.35
CUEDC1-202ENST00000407144 SPRR2AP35326 72 aa6.61□□□□□ -1.35
CUEDC1-202ENST00000407144 PRM1P04553 51 aa6.59□□□□□ -1.35
CUEDC1-202ENST00000407144 LCE1AQ5T7P2 110 aa6.59□□□□□ -1.35
CUEDC1-202ENST00000407144 KRTAP5-5Q701N2 237 aaPredicted RBP6.55□□□□□ -1.36
CUEDC1-202ENST00000407144 LCE3BQ5TA77 95 aa6.53□□□□□ -1.36
CUEDC1-202ENST00000407144 LCE3EQ5T5B0 92 aa6.52□□□□□ -1.36
CUEDC1-202ENST00000407144 KRTAP19-3Q7Z4W3 81 aa6.51□□□□□ -1.37
CUEDC1-202ENST00000407144 LCE3DQ9BYE3 92 aa6.51□□□□□ -1.37
CUEDC1-202ENST00000407144 KRTAP4-9Q9BYQ8 210 aa6.51□□□□□ -1.37
CUEDC1-202ENST00000407144 DSTQ03001 7570 aaKnown RBP6.39□□□□□ -1.39
CUEDC1-202ENST00000407144 KRTAP2-2Q9BYT5 123 aa6.38□□□□□ -1.39
CUEDC1-202ENST00000407144 SPRR2DP22532 72 aa6.37□□□□□ -1.39
CUEDC1-202ENST00000407144 KRTAP20-1Q3LI63 56 aa6.35□□□□□ -1.39
CUEDC1-202ENST00000407144 LCE5AQ5TCM9 118 aa6.32□□□□□ -1.4
CUEDC1-202ENST00000407144 SYNE1Q8NF91 8797 aaKnown RBP6.26□□□□□ -1.41
CUEDC1-202ENST00000407144 KRTAP6-1Q3LI64 71 aa6.18□□□□□ -1.42
CUEDC1-202ENST00000407144 KRTAP6-2Q3LI66 62 aa6.13□□□□□ -1.43
CUEDC1-202ENST00000407144 KRTAP9-4Q9BYQ2 154 aa5.7□□□□□ -1.5
CUEDC1-202ENST00000407144 LCE1EQ5T753 118 aa5.66□□□□□ -1.5
CUEDC1-202ENST00000407144 HMCN1Q96RW7 5635 aa5.64□□□□□ -1.51
CUEDC1-202ENST00000407144 KRTAP5-4Q6L8H1 288 aa5.62□□□□□ -1.51
CUEDC1-202ENST00000407144 MT4P47944 62 aa5.6□□□□□ -1.51
CUEDC1-202ENST00000407144 LCE1DQ5T752 114 aa5.6□□□□□ -1.51
CUEDC1-202ENST00000407144 LCE4AQ5TA78 99 aa5.58□□□□□ -1.52
CUEDC1-202ENST00000407144 KRTAP4-6Q9BYQ5 205 aa5.51□□□□□ -1.53
CUEDC1-202ENST00000407144 MT3P25713 68 aa5.46□□□□□ -1.53
CUEDC1-202ENST00000407144 OBSCNQ5VST9 7968 aa5.33□□□□□ -1.56
CUEDC1-202ENST00000407144 KRTAP20-2Q3LI61 65 aa5.3□□□□□ -1.56
CUEDC1-202ENST00000407144 AHNAK2Q8IVF2 5795 aa5.22□□□□□ -1.57
CUEDC1-202ENST00000407144 GPR98Q8WXG9 6306 aa5.21□□□□□ -1.58
CUEDC1-202ENST00000407144 KRTAP5-3Q6L8H2 238 aa5.14□□□□□ -1.59
CUEDC1-202ENST00000407144 KRTAP5-10Q6L8G5 202 aa4.99□□□□□ -1.61
CUEDC1-202ENST00000407144 KRTAP5-2Q701N4 177 aa4.99□□□□□ -1.61
CUEDC1-202ENST00000407144 KRTAP4-11Q9BYQ6 195 aa4.85□□□□□ -1.63
CUEDC1-202ENST00000407144 KRTAP5-7Q6L8G8 165 aa4.7□□□□□ -1.66
CUEDC1-202ENST00000407144 MUC5ACP98088 5654 aa4.64□□□□□ -1.67
CUEDC1-202ENST00000407144 LCE1FQ5T754 118 aa4.61□□□□□ -1.67
CUEDC1-202ENST00000407144 KRTAP5-8O75690 187 aa4.59□□□□□ -1.67
CUEDC1-202ENST00000407144 KRTAP5-1Q6L8H4 278 aa4.5□□□□□ -1.69
CUEDC1-202ENST00000407144 KRTAP21-1Q3LI58 79 aa4.34□□□□□ -1.72
CUEDC1-202ENST00000407144 MUC5BQ9HC84 5762 aaPredicted RBP4.31□□□□□ -1.72
CUEDC1-202ENST00000407144 KRTAP9-9Q9BYP9 154 aa4.21□□□□□ -1.73
CUEDC1-202ENST00000407144 LCE1BQ5T7P3 118 aa4.17□□□□□ -1.74
CUEDC1-202ENST00000407144 AHNAKQ09666 5890 aaKnown RBP4.12□□□□□ -1.75
CUEDC1-202ENST00000407144 KRTAP4-2Q9BYR5 136 aa4.12□□□□□ -1.75
CUEDC1-202ENST00000407144 LCE1CQ5T751 118 aa4.03□□□□□ -1.76
CUEDC1-202ENST00000407144 KRTAP21-2Q3LI59 83 aa3.99□□□□□ -1.77
CUEDC1-202ENST00000407144 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.92□□□□□ -1.78
CUEDC1-202ENST00000407144 MUC19Q7Z5P9 8384 aa3.68□□□□□ -1.82
CUEDC1-202ENST00000407144 KRTAP4-12Q9BQ66 201 aa3.64□□□□□ -1.83
CUEDC1-202ENST00000407144 KRTAP5-11Q6L8G4 156 aa3.61□□□□□ -1.83
CUEDC1-202ENST00000407144 KRTAP4-4Q9BYR3 166 aa3.53□□□□□ -1.84
CUEDC1-202ENST00000407144 PHGR1C9JFL3 82 aa3.12□□□□□ -1.91
CUEDC1-202ENST00000407144 MUC16Q8WXI7 14507 aa2.09□□□□□ -2.08
Retrieved 77 of 20,778 RNA–protein pairs in 10.5 ms