RNA–Protein interactions for RNA: ENST00000406854.5

PCNX4-203, Transcript of pecanex 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PCNX4, Length 4,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-203ENST00000406854 HMCN2Q8NDA2 5059 aa4.61□□□□□ -1.67
PCNX4-203ENST00000406854 RNF213Q63HN8 5207 aa4.59□□□□□ -1.67
PCNX4-203ENST00000406854 MT1MQ8N339 61 aa4.57□□□□□ -1.68
PCNX4-203ENST00000406854 KRTAP19-7Q3SYF9 63 aa4.51□□□□□ -1.69
PCNX4-203ENST00000406854 LOC100996750A0A140TA64 210 aa4.5□□□□□ -1.69
PCNX4-203ENST00000406854 KRTAP19-6Q3LI70 58 aa4.49□□□□□ -1.69
PCNX4-203ENST00000406854 KRTAP4-3Q9BYR4 195 aa4.48□□□□□ -1.69
PCNX4-203ENST00000406854 MUC2Q02817 5179 aa4.46□□□□□ -1.7
PCNX4-203ENST00000406854 OBSCNQ5VST9 7968 aa4.39□□□□□ -1.71
PCNX4-203ENST00000406854 LCE2AQ5TA79 106 aaPredicted RBP4.39□□□□□ -1.71
PCNX4-203ENST00000406854 MT3P25713 68 aa4.37□□□□□ -1.71
PCNX4-203ENST00000406854 KRTAP2-3P0C7H8 128 aa4.36□□□□□ -1.71
PCNX4-203ENST00000406854 KRTAP2-4Q9BYR9 128 aa4.36□□□□□ -1.71
PCNX4-203ENST00000406854 KRTAP2-1Q9BYU5 128 aa4.36□□□□□ -1.71
PCNX4-203ENST00000406854 PRM1P04553 51 aa4.36□□□□□ -1.71
PCNX4-203ENST00000406854 LCE2DQ5TA82 110 aaPredicted RBP4.29□□□□□ -1.72
PCNX4-203ENST00000406854 KRTAP9-6A8MVA2 160 aa4.27□□□□□ -1.73
PCNX4-203ENST00000406854 MT1AP04731 61 aa4.24□□□□□ -1.73
PCNX4-203ENST00000406854 KRTAP4-9Q9BYQ8 210 aa4.22□□□□□ -1.73
PCNX4-203ENST00000406854 FCGBPQ9Y6R7 5405 aaPredicted RBP4.21□□□□□ -1.74
PCNX4-203ENST00000406854 MT4P47944 62 aa4.16□□□□□ -1.74
PCNX4-203ENST00000406854 KRTAP9-2Q9BYQ4 174 aa4.15□□□□□ -1.75
PCNX4-203ENST00000406854 SYNE2Q8WXH0 6885 aaKnown RBP4.11□□□□□ -1.75
PCNX4-203ENST00000406854 DSTQ03001 7570 aaKnown RBP4.11□□□□□ -1.75
PCNX4-203ENST00000406854 USH2AO75445 5202 aa4.08□□□□□ -1.76
PCNX4-203ENST00000406854 LCE1DQ5T752 114 aa4.06□□□□□ -1.76
PCNX4-203ENST00000406854 LCE1BQ5T7P3 118 aa4.06□□□□□ -1.76
PCNX4-203ENST00000406854 KRTAP6-1Q3LI64 71 aa4.03□□□□□ -1.76
PCNX4-203ENST00000406854 LCE5AQ5TCM9 118 aa4.01□□□□□ -1.77
PCNX4-203ENST00000406854 LCE1AQ5T7P2 110 aa3.95□□□□□ -1.78
PCNX4-203ENST00000406854 KRTAP6-2Q3LI66 62 aa3.9□□□□□ -1.79
PCNX4-203ENST00000406854 KMT2DO14686 5537 aa3.9□□□□□ -1.79
PCNX4-203ENST00000406854 KRTAP9-4Q9BYQ2 154 aa3.87□□□□□ -1.79
PCNX4-203ENST00000406854 KRTAP9-7A8MTY7 169 aa3.82□□□□□ -1.8
PCNX4-203ENST00000406854 KRTAP9-6A0A140TA67 174 aa3.78□□□□□ -1.8
PCNX4-203ENST00000406854 MACF1Q9UPN3 7388 aaKnown RBP3.77□□□□□ -1.81
PCNX4-203ENST00000406854 KRTAP6-3Q3LI67 103 aa3.76□□□□□ -1.81
PCNX4-203ENST00000406854 MUC12Q9UKN1 5478 aa3.71□□□□□ -1.82
PCNX4-203ENST00000406854 LCE4AQ5TA78 99 aa3.63□□□□□ -1.83
PCNX4-203ENST00000406854 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.62□□□□□ -1.83
PCNX4-203ENST00000406854 KRTAP20-1Q3LI63 56 aa3.59□□□□□ -1.83
PCNX4-203ENST00000406854 MUC19Q7Z5P9 8384 aa3.58□□□□□ -1.84
PCNX4-203ENST00000406854 SSPOA2VEC9 5147 aa3.57□□□□□ -1.84
PCNX4-203ENST00000406854 KRTAP2-2Q9BYT5 123 aa3.51□□□□□ -1.85
PCNX4-203ENST00000406854 MDN1Q9NU22 5596 aa3.5□□□□□ -1.85
PCNX4-203ENST00000406854 KRTAP5-9P26371 169 aa3.4□□□□□ -1.87
PCNX4-203ENST00000406854 LCE1CQ5T751 118 aa3.31□□□□□ -1.88
PCNX4-203ENST00000406854 LCE1EQ5T753 118 aa3.31□□□□□ -1.88
PCNX4-203ENST00000406854 LCE1FQ5T754 118 aa3.31□□□□□ -1.88
PCNX4-203ENST00000406854 NEBP20929 6669 aa3.27□□□□□ -1.89
PCNX4-203ENST00000406854 KRTAP4-6Q9BYQ5 205 aa3.26□□□□□ -1.89
PCNX4-203ENST00000406854 KRTAP4-11Q9BYQ6 195 aa3.23□□□□□ -1.89
PCNX4-203ENST00000406854 KRTAP20-2Q3LI61 65 aa3.19□□□□□ -1.9
PCNX4-203ENST00000406854 KRTAP5-5Q701N2 237 aaPredicted RBP3.17□□□□□ -1.9
PCNX4-203ENST00000406854 KRTAP9-9Q9BYP9 154 aa3.04□□□□□ -1.92
PCNX4-203ENST00000406854 GPR98Q8WXG9 6306 aa2.99□□□□□ -1.93
PCNX4-203ENST00000406854 MUC5ACP98088 5654 aa2.94□□□□□ -1.94
PCNX4-203ENST00000406854 KRTAP4-4Q9BYR3 166 aa2.91□□□□□ -1.94
PCNX4-203ENST00000406854 KRTAP5-4Q6L8H1 288 aa2.89□□□□□ -1.95
PCNX4-203ENST00000406854 HMCN1Q96RW7 5635 aa2.86□□□□□ -1.95
PCNX4-203ENST00000406854 KRTAP4-12Q9BQ66 201 aa2.81□□□□□ -1.96
PCNX4-203ENST00000406854 KRTAP4-2Q9BYR5 136 aa2.81□□□□□ -1.96
PCNX4-203ENST00000406854 AHNAK2Q8IVF2 5795 aa2.65□□□□□ -1.99
PCNX4-203ENST00000406854 KRTAP5-3Q6L8H2 238 aa2.54□□□□□ -2
PCNX4-203ENST00000406854 KRTAP5-10Q6L8G5 202 aa2.51□□□□□ -2.01
PCNX4-203ENST00000406854 KRTAP5-2Q701N4 177 aa2.44□□□□□ -2.02
PCNX4-203ENST00000406854 KRTAP5-8O75690 187 aa2.34□□□□□ -2.03
PCNX4-203ENST00000406854 MUC5BQ9HC84 5762 aaPredicted RBP2.24□□□□□ -2.05
PCNX4-203ENST00000406854 AHNAKQ09666 5890 aaKnown RBP2.19□□□□□ -2.06
PCNX4-203ENST00000406854 KRTAP5-1Q6L8H4 278 aa2.17□□□□□ -2.06
PCNX4-203ENST00000406854 KRTAP5-11Q6L8G4 156 aa2.16□□□□□ -2.06
PCNX4-203ENST00000406854 KRTAP21-2Q3LI59 83 aa2.14□□□□□ -2.07
PCNX4-203ENST00000406854 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.98□□□□□ -2.09
PCNX4-203ENST00000406854 KRTAP21-1Q3LI58 79 aa1.97□□□□□ -2.09
PCNX4-203ENST00000406854 PHGR1C9JFL3 82 aa1.93□□□□□ -2.1
PCNX4-203ENST00000406854 KRTAP5-7Q6L8G8 165 aa1.69□□□□□ -2.14
PCNX4-203ENST00000406854 MUC16Q8WXI7 14507 aa1.29□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 38.9 ms