RNA–Protein interactions for RNA: ENST00000404816.6

LTBP1-203, Transcript of latent transforming growth factor beta binding protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene LTBP1, Length 6,333 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP1-203ENST00000404816 MT1EP04732 61 aa5.63□□□□□ -1.51
LTBP1-203ENST00000404816 KRTAP9-2Q9BYQ4 174 aa5.58□□□□□ -1.52
LTBP1-203ENST00000404816 MT3P25713 68 aa5.57□□□□□ -1.52
LTBP1-203ENST00000404816 KRTAP4-9Q9BYQ8 210 aa5.54□□□□□ -1.52
LTBP1-203ENST00000404816 LCE5AQ5TCM9 118 aa5.52□□□□□ -1.53
LTBP1-203ENST00000404816 MT1MQ8N339 61 aa5.46□□□□□ -1.53
LTBP1-203ENST00000404816 EPPK1P58107 5090 aaKnown RBP5.44□□□□□ -1.54
LTBP1-203ENST00000404816 KRTAP9-6A0A140TA67 174 aa5.42□□□□□ -1.54
LTBP1-203ENST00000404816 KRTAP20-1Q3LI63 56 aa5.4□□□□□ -1.55
LTBP1-203ENST00000404816 ABCA13Q86UQ4 5058 aa5.37□□□□□ -1.55
LTBP1-203ENST00000404816 KRTAP19-6Q3LI70 58 aa5.35□□□□□ -1.55
LTBP1-203ENST00000404816 HMCN2Q8NDA2 5059 aa5.3□□□□□ -1.56
LTBP1-203ENST00000404816 FAT4Q6V0I7 4981 aa5.27□□□□□ -1.57
LTBP1-203ENST00000404816 LCE1CQ5T751 118 aa5.26□□□□□ -1.57
LTBP1-203ENST00000404816 LCE1EQ5T753 118 aa5.26□□□□□ -1.57
LTBP1-203ENST00000404816 LCE1FQ5T754 118 aa5.26□□□□□ -1.57
LTBP1-203ENST00000404816 LCE1AQ5T7P2 110 aa5.26□□□□□ -1.57
LTBP1-203ENST00000404816 KRTAP19-7Q3SYF9 63 aa5.25□□□□□ -1.57
LTBP1-203ENST00000404816 KRTAP2-3P0C7H8 128 aa5.21□□□□□ -1.57
LTBP1-203ENST00000404816 KRTAP2-4Q9BYR9 128 aa5.21□□□□□ -1.57
LTBP1-203ENST00000404816 KRTAP2-1Q9BYU5 128 aa5.21□□□□□ -1.57
LTBP1-203ENST00000404816 LCE2AQ5TA79 106 aaPredicted RBP5.16□□□□□ -1.58
LTBP1-203ENST00000404816 KRTAP9-7A8MTY7 169 aa5.14□□□□□ -1.59
LTBP1-203ENST00000404816 RNF213Q63HN8 5207 aa5.12□□□□□ -1.59
LTBP1-203ENST00000404816 SYNE2Q8WXH0 6885 aaKnown RBP5.08□□□□□ -1.6
LTBP1-203ENST00000404816 KRTAP6-2Q3LI66 62 aa5.07□□□□□ -1.6
LTBP1-203ENST00000404816 KRTAP9-6A8MVA2 160 aa5.07□□□□□ -1.6
LTBP1-203ENST00000404816 UBR4Q5T4S7 5183 aa5.06□□□□□ -1.6
LTBP1-203ENST00000404816 MT1AP04731 61 aa5.03□□□□□ -1.6
LTBP1-203ENST00000404816 FSIP2Q5CZC0 6907 aa5.02□□□□□ -1.61
LTBP1-203ENST00000404816 KRTAP6-1Q3LI64 71 aa4.93□□□□□ -1.62
LTBP1-203ENST00000404816 SYNE1Q8NF91 8797 aaKnown RBP4.92□□□□□ -1.62
LTBP1-203ENST00000404816 MUC2Q02817 5179 aa4.91□□□□□ -1.62
LTBP1-203ENST00000404816 LCE4AQ5TA78 99 aa4.79□□□□□ -1.64
LTBP1-203ENST00000404816 KRTAP6-3Q3LI67 103 aa4.76□□□□□ -1.65
LTBP1-203ENST00000404816 KRTAP2-2Q9BYT5 123 aa4.75□□□□□ -1.65
LTBP1-203ENST00000404816 KRTAP9-4Q9BYQ2 154 aa4.71□□□□□ -1.66
LTBP1-203ENST00000404816 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.69□□□□□ -1.66
LTBP1-203ENST00000404816 OBSCNQ5VST9 7968 aa4.59□□□□□ -1.67
LTBP1-203ENST00000404816 KRTAP9-9Q9BYP9 154 aa4.56□□□□□ -1.68
LTBP1-203ENST00000404816 KMT2DO14686 5537 aa4.46□□□□□ -1.7
LTBP1-203ENST00000404816 KRTAP4-11Q9BYQ6 195 aa4.39□□□□□ -1.71
LTBP1-203ENST00000404816 FCGBPQ9Y6R7 5405 aaPredicted RBP4.3□□□□□ -1.72
LTBP1-203ENST00000404816 USH2AO75445 5202 aa4.3□□□□□ -1.72
LTBP1-203ENST00000404816 KRTAP20-2Q3LI61 65 aa4.29□□□□□ -1.72
LTBP1-203ENST00000404816 DSTQ03001 7570 aaKnown RBP4.19□□□□□ -1.74
LTBP1-203ENST00000404816 MACF1Q9UPN3 7388 aaKnown RBP4.14□□□□□ -1.75
LTBP1-203ENST00000404816 SSPOA2VEC9 5147 aa4.1□□□□□ -1.75
LTBP1-203ENST00000404816 KRTAP4-4Q9BYR3 166 aa4□□□□□ -1.77
LTBP1-203ENST00000404816 KRTAP5-9P26371 169 aa4□□□□□ -1.77
LTBP1-203ENST00000404816 KRTAP4-6Q9BYQ5 205 aa3.96□□□□□ -1.78
LTBP1-203ENST00000404816 NEBP20929 6669 aa3.95□□□□□ -1.78
LTBP1-203ENST00000404816 KRTAP4-12Q9BQ66 201 aa3.95□□□□□ -1.78
LTBP1-203ENST00000404816 KRTAP4-2Q9BYR5 136 aa3.95□□□□□ -1.78
LTBP1-203ENST00000404816 MUC12Q9UKN1 5478 aa3.93□□□□□ -1.78
LTBP1-203ENST00000404816 GPR98Q8WXG9 6306 aa3.86□□□□□ -1.79
LTBP1-203ENST00000404816 KRTAP5-5Q701N2 237 aaPredicted RBP3.86□□□□□ -1.79
LTBP1-203ENST00000404816 MUC19Q7Z5P9 8384 aa3.7□□□□□ -1.82
LTBP1-203ENST00000404816 KRTAP5-4Q6L8H1 288 aa3.53□□□□□ -1.85
LTBP1-203ENST00000404816 MDN1Q9NU22 5596 aa3.39□□□□□ -1.87
LTBP1-203ENST00000404816 PHGR1C9JFL3 82 aa3.11□□□□□ -1.91
LTBP1-203ENST00000404816 KRTAP5-3Q6L8H2 238 aa3.09□□□□□ -1.91
LTBP1-203ENST00000404816 MUC5ACP98088 5654 aa3.04□□□□□ -1.92
LTBP1-203ENST00000404816 KRTAP5-10Q6L8G5 202 aa2.89□□□□□ -1.95
LTBP1-203ENST00000404816 KRTAP5-2Q701N4 177 aa2.85□□□□□ -1.95
LTBP1-203ENST00000404816 KRTAP5-8O75690 187 aa2.84□□□□□ -1.95
LTBP1-203ENST00000404816 HMCN1Q96RW7 5635 aa2.8□□□□□ -1.96
LTBP1-203ENST00000404816 AHNAK2Q8IVF2 5795 aa2.79□□□□□ -1.96
LTBP1-203ENST00000404816 KRTAP5-1Q6L8H4 278 aa2.58□□□□□ -2
LTBP1-203ENST00000404816 MUC5BQ9HC84 5762 aaPredicted RBP2.53□□□□□ -2
LTBP1-203ENST00000404816 KRTAP5-11Q6L8G4 156 aa2.48□□□□□ -2.01
LTBP1-203ENST00000404816 KRTAP21-2Q3LI59 83 aa2.48□□□□□ -2.01
LTBP1-203ENST00000404816 AHNAKQ09666 5890 aaKnown RBP2.39□□□□□ -2.03
LTBP1-203ENST00000404816 KRTAP21-1Q3LI58 79 aa2.38□□□□□ -2.03
LTBP1-203ENST00000404816 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.23□□□□□ -2.05
LTBP1-203ENST00000404816 KRTAP5-7Q6L8G8 165 aa2□□□□□ -2.09
LTBP1-203ENST00000404816 MUC16Q8WXI7 14507 aa1.67□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 6.4 ms