RNA–Protein interactions for RNA: ENST00000403681.6

HMGA2-204, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HMGA2, Length 4,473 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-204ENST00000403681 MT1GP13640 62 aa4.62□□□□□ -1.67
HMGA2-204ENST00000403681 MT1LQ93083 61 aa4.62□□□□□ -1.67
HMGA2-204ENST00000403681 KRTAP9-6A8MVA2 160 aa4.61□□□□□ -1.67
HMGA2-204ENST00000403681 KRTAP2-3P0C7H8 128 aa4.61□□□□□ -1.67
HMGA2-204ENST00000403681 KRTAP2-4Q9BYR9 128 aa4.61□□□□□ -1.67
HMGA2-204ENST00000403681 KRTAP2-1Q9BYU5 128 aa4.61□□□□□ -1.67
HMGA2-204ENST00000403681 KMT2DO14686 5537 aa4.59□□□□□ -1.68
HMGA2-204ENST00000403681 MT1EP04732 61 aa4.56□□□□□ -1.68
HMGA2-204ENST00000403681 KRTAP19-7Q3SYF9 63 aa4.54□□□□□ -1.68
HMGA2-204ENST00000403681 LCE3BQ5TA77 95 aa4.52□□□□□ -1.69
HMGA2-204ENST00000403681 KRTAP9-6A0A140TA67 174 aa4.46□□□□□ -1.7
HMGA2-204ENST00000403681 LOC100996750A0A140TA64 210 aa4.44□□□□□ -1.7
HMGA2-204ENST00000403681 KRTAP9-2Q9BYQ4 174 aa4.42□□□□□ -1.7
HMGA2-204ENST00000403681 KRTAP4-3Q9BYR4 195 aa4.4□□□□□ -1.71
HMGA2-204ENST00000403681 KRTAP19-3Q7Z4W3 81 aa4.35□□□□□ -1.71
HMGA2-204ENST00000403681 LCE3DQ9BYE3 92 aa4.33□□□□□ -1.72
HMGA2-204ENST00000403681 MT1MQ8N339 61 aa4.31□□□□□ -1.72
HMGA2-204ENST00000403681 DSTQ03001 7570 aaKnown RBP4.3□□□□□ -1.72
HMGA2-204ENST00000403681 SSPOA2VEC9 5147 aa4.3□□□□□ -1.72
HMGA2-204ENST00000403681 LCE3EQ5T5B0 92 aa4.29□□□□□ -1.72
HMGA2-204ENST00000403681 KRTAP19-6Q3LI70 58 aa4.28□□□□□ -1.72
HMGA2-204ENST00000403681 KRTAP20-1Q3LI63 56 aa4.26□□□□□ -1.73
HMGA2-204ENST00000403681 FCGBPQ9Y6R7 5405 aaPredicted RBP4.26□□□□□ -1.73
HMGA2-204ENST00000403681 GPR98Q8WXG9 6306 aa4.24□□□□□ -1.73
HMGA2-204ENST00000403681 MUC12Q9UKN1 5478 aa4.19□□□□□ -1.74
HMGA2-204ENST00000403681 KRTAP9-7A8MTY7 169 aa4.19□□□□□ -1.74
HMGA2-204ENST00000403681 KRTAP4-9Q9BYQ8 210 aa4.18□□□□□ -1.74
HMGA2-204ENST00000403681 PRM1P04553 51 aa4.17□□□□□ -1.74
HMGA2-204ENST00000403681 MT3P25713 68 aa4.1□□□□□ -1.75
HMGA2-204ENST00000403681 MT4P47944 62 aa4.1□□□□□ -1.75
HMGA2-204ENST00000403681 MACF1Q9UPN3 7388 aaKnown RBP4.08□□□□□ -1.76
HMGA2-204ENST00000403681 SYNE2Q8WXH0 6885 aaKnown RBP4□□□□□ -1.77
HMGA2-204ENST00000403681 KRTAP6-3Q3LI67 103 aa3.97□□□□□ -1.77
HMGA2-204ENST00000403681 MT1AP04731 61 aa3.97□□□□□ -1.77
HMGA2-204ENST00000403681 KRTAP6-1Q3LI64 71 aa3.93□□□□□ -1.78
HMGA2-204ENST00000403681 LCE1AQ5T7P2 110 aa3.91□□□□□ -1.78
HMGA2-204ENST00000403681 LCE1BQ5T7P3 118 aa3.91□□□□□ -1.78
HMGA2-204ENST00000403681 KRTAP2-2Q9BYT5 123 aa3.91□□□□□ -1.78
HMGA2-204ENST00000403681 LCE5AQ5TCM9 118 aa3.89□□□□□ -1.79
HMGA2-204ENST00000403681 LCE1DQ5T752 114 aa3.88□□□□□ -1.79
HMGA2-204ENST00000403681 KRTAP6-2Q3LI66 62 aa3.8□□□□□ -1.8
HMGA2-204ENST00000403681 LCE4AQ5TA78 99 aa3.8□□□□□ -1.8
HMGA2-204ENST00000403681 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.79□□□□□ -1.8
HMGA2-204ENST00000403681 MDN1Q9NU22 5596 aa3.77□□□□□ -1.81
HMGA2-204ENST00000403681 MUC19Q7Z5P9 8384 aa3.75□□□□□ -1.81
HMGA2-204ENST00000403681 KRTAP9-4Q9BYQ2 154 aa3.65□□□□□ -1.82
HMGA2-204ENST00000403681 LCE1CQ5T751 118 aa3.58□□□□□ -1.84
HMGA2-204ENST00000403681 LCE1EQ5T753 118 aa3.58□□□□□ -1.84
HMGA2-204ENST00000403681 LCE1FQ5T754 118 aa3.58□□□□□ -1.84
HMGA2-204ENST00000403681 KRTAP5-5Q701N2 237 aaPredicted RBP3.57□□□□□ -1.84
HMGA2-204ENST00000403681 KRTAP5-9P26371 169 aa3.54□□□□□ -1.84
HMGA2-204ENST00000403681 KRTAP9-9Q9BYP9 154 aa3.52□□□□□ -1.85
HMGA2-204ENST00000403681 NEBP20929 6669 aa3.36□□□□□ -1.87
HMGA2-204ENST00000403681 KRTAP4-6Q9BYQ5 205 aa3.19□□□□□ -1.9
HMGA2-204ENST00000403681 KRTAP4-11Q9BYQ6 195 aa3.11□□□□□ -1.91
HMGA2-204ENST00000403681 KRTAP20-2Q3LI61 65 aa3.02□□□□□ -1.93
HMGA2-204ENST00000403681 AHNAK2Q8IVF2 5795 aa2.96□□□□□ -1.94
HMGA2-204ENST00000403681 KRTAP5-4Q6L8H1 288 aa2.94□□□□□ -1.94
HMGA2-204ENST00000403681 HMCN1Q96RW7 5635 aa2.93□□□□□ -1.94
HMGA2-204ENST00000403681 MUC5ACP98088 5654 aa2.78□□□□□ -1.96
HMGA2-204ENST00000403681 KRTAP5-2Q701N4 177 aa2.68□□□□□ -1.98
HMGA2-204ENST00000403681 KRTAP5-10Q6L8G5 202 aa2.66□□□□□ -1.98
HMGA2-204ENST00000403681 KRTAP5-3Q6L8H2 238 aa2.66□□□□□ -1.98
HMGA2-204ENST00000403681 KRTAP4-12Q9BQ66 201 aa2.66□□□□□ -1.98
HMGA2-204ENST00000403681 KRTAP4-4Q9BYR3 166 aa2.62□□□□□ -1.99
HMGA2-204ENST00000403681 KRTAP4-2Q9BYR5 136 aa2.56□□□□□ -2
HMGA2-204ENST00000403681 AHNAKQ09666 5890 aaKnown RBP2.43□□□□□ -2.02
HMGA2-204ENST00000403681 KRTAP5-1Q6L8H4 278 aa2.38□□□□□ -2.03
HMGA2-204ENST00000403681 KRTAP5-8O75690 187 aa2.34□□□□□ -2.03
HMGA2-204ENST00000403681 PHGR1C9JFL3 82 aa2.33□□□□□ -2.04
HMGA2-204ENST00000403681 MUC5BQ9HC84 5762 aaPredicted RBP2.32□□□□□ -2.04
HMGA2-204ENST00000403681 KRTAP21-2Q3LI59 83 aa2.29□□□□□ -2.04
HMGA2-204ENST00000403681 KRTAP21-1Q3LI58 79 aa2.25□□□□□ -2.05
HMGA2-204ENST00000403681 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.13□□□□□ -2.07
HMGA2-204ENST00000403681 KRTAP5-11Q6L8G4 156 aa2.08□□□□□ -2.08
HMGA2-204ENST00000403681 KRTAP5-7Q6L8G8 165 aa2.01□□□□□ -2.09
HMGA2-204ENST00000403681 MUC16Q8WXI7 14507 aa1.26□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 109.4 ms