RNA–Protein interactions for RNA: ENST00000400217.6

CSNK2A1-203, Transcript of casein kinase 2 alpha 1, humanhuman

TSL 2 BASIC

Gene CSNK2A1, Length 1,451 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1-203ENST00000400217 KRTAP19-5Q3LI72 72 aa6.39□□□□□ -1.39
CSNK2A1-203ENST00000400217 KRTAP19-7Q3SYF9 63 aa6.3□□□□□ -1.4
CSNK2A1-203ENST00000400217 KRTAP15-1Q3LI76 137 aa6.28□□□□□ -1.4
CSNK2A1-203ENST00000400217 MT1EP04732 61 aa6.2□□□□□ -1.42
CSNK2A1-203ENST00000400217 MACF1Q9UPN3 7388 aaKnown RBP6.17□□□□□ -1.42
CSNK2A1-203ENST00000400217 SPRR2FQ96RM1 72 aa6.09□□□□□ -1.43
CSNK2A1-203ENST00000400217 LCE5AQ5TCM9 118 aa6.08□□□□□ -1.44
CSNK2A1-203ENST00000400217 MT1LQ93083 61 aa6.08□□□□□ -1.44
CSNK2A1-203ENST00000400217 KRTAP5-9P26371 169 aa6.03□□□□□ -1.44
CSNK2A1-203ENST00000400217 KRTAP19-4Q3LI73 84 aa6.03□□□□□ -1.44
CSNK2A1-203ENST00000400217 LCE4AQ5TA78 99 aa6.02□□□□□ -1.44
CSNK2A1-203ENST00000400217 LCE3CQ5T5A8 94 aa6□□□□□ -1.45
CSNK2A1-203ENST00000400217 SPRR5A0A1B0GTR4 108 aa5.97□□□□□ -1.45
CSNK2A1-203ENST00000400217 KRTAP19-3Q7Z4W3 81 aa5.96□□□□□ -1.45
CSNK2A1-203ENST00000400217 MUC12Q9UKN1 5478 aa5.96□□□□□ -1.46
CSNK2A1-203ENST00000400217 KRTAP6-3Q3LI67 103 aa5.95□□□□□ -1.46
CSNK2A1-203ENST00000400217 SYNE2Q8WXH0 6885 aaKnown RBP5.95□□□□□ -1.46
CSNK2A1-203ENST00000400217 MT1GP13640 62 aa5.92□□□□□ -1.46
CSNK2A1-203ENST00000400217 KRTAP9-7A8MTY7 169 aa5.85□□□□□ -1.47
CSNK2A1-203ENST00000400217 LCE1AQ5T7P2 110 aa5.83□□□□□ -1.48
CSNK2A1-203ENST00000400217 MT1MQ8N339 61 aa5.83□□□□□ -1.48
CSNK2A1-203ENST00000400217 H3BS24 57 aa5.81□□□□□ -1.48
CSNK2A1-203ENST00000400217 SPRR2EP22531 72 aa5.79□□□□□ -1.48
CSNK2A1-203ENST00000400217 SPRR2BP35325 72 aa5.79□□□□□ -1.48
CSNK2A1-203ENST00000400217 SPRR2AP35326 72 aa5.79□□□□□ -1.48
CSNK2A1-203ENST00000400217 LUZP6Q538Z0 58 aa5.77□□□□□ -1.49
CSNK2A1-203ENST00000400217 MDN1Q9NU22 5596 aa5.74□□□□□ -1.49
CSNK2A1-203ENST00000400217 KRTAP4-3Q9BYR4 195 aa5.72□□□□□ -1.49
CSNK2A1-203ENST00000400217 KRTAP9-6A8MVA2 160 aa5.66□□□□□ -1.5
CSNK2A1-203ENST00000400217 NDUFAF8A1L188 74 aa5.61□□□□□ -1.51
CSNK2A1-203ENST00000400217 SPRR2DP22532 72 aa5.58□□□□□ -1.52
CSNK2A1-203ENST00000400217 DSTQ03001 7570 aaKnown RBP5.46□□□□□ -1.54
CSNK2A1-203ENST00000400217 NEBP20929 6669 aa5.42□□□□□ -1.54
CSNK2A1-203ENST00000400217 KRTAP5-5Q701N2 237 aaPredicted RBP5.26□□□□□ -1.57
CSNK2A1-203ENST00000400217 KRTAP2-3P0C7H8 128 aa5.22□□□□□ -1.57
CSNK2A1-203ENST00000400217 KRTAP2-4Q9BYR9 128 aa5.22□□□□□ -1.57
CSNK2A1-203ENST00000400217 KRTAP2-1Q9BYU5 128 aa5.22□□□□□ -1.57
CSNK2A1-203ENST00000400217 A0A0A0MQY5 61 aa5.21□□□□□ -1.58
CSNK2A1-203ENST00000400217 MT1AP04731 61 aa5.17□□□□□ -1.58
CSNK2A1-203ENST00000400217 KRTAP6-1Q3LI64 71 aa5.12□□□□□ -1.59
CSNK2A1-203ENST00000400217 KRTAP20-1Q3LI63 56 aa5.1□□□□□ -1.59
CSNK2A1-203ENST00000400217 KRTAP2-2Q9BYT5 123 aa5.1□□□□□ -1.59
CSNK2A1-203ENST00000400217 KRTAP5-4Q6L8H1 288 aa5.04□□□□□ -1.6
CSNK2A1-203ENST00000400217 SYNE1Q8NF91 8797 aaKnown RBP4.92□□□□□ -1.62
CSNK2A1-203ENST00000400217 KRTAP12-4P60329 112 aa4.91□□□□□ -1.62
CSNK2A1-203ENST00000400217 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.88□□□□□ -1.63
CSNK2A1-203ENST00000400217 MT4P47944 62 aa4.84□□□□□ -1.63
CSNK2A1-203ENST00000400217 KRTAP6-2Q3LI66 62 aa4.72□□□□□ -1.65
CSNK2A1-203ENST00000400217 KRTAP20-2Q3LI61 65 aa4.71□□□□□ -1.66
CSNK2A1-203ENST00000400217 MT3P25713 68 aa4.69□□□□□ -1.66
CSNK2A1-203ENST00000400217 HMCN1Q96RW7 5635 aa4.64□□□□□ -1.67
CSNK2A1-203ENST00000400217 INE1O15225 51 aa4.63□□□□□ -1.67
CSNK2A1-203ENST00000400217 KRTAP5-2Q701N4 177 aa4.56□□□□□ -1.68
CSNK2A1-203ENST00000400217 LCE3DQ9BYE3 92 aa4.5□□□□□ -1.69
CSNK2A1-203ENST00000400217 KRTAP5-11Q6L8G4 156 aa4.4□□□□□ -1.71
CSNK2A1-203ENST00000400217 LCE3EQ5T5B0 92 aa4.37□□□□□ -1.71
CSNK2A1-203ENST00000400217 OBSCNQ5VST9 7968 aa4.22□□□□□ -1.73
CSNK2A1-203ENST00000400217 AHNAK2Q8IVF2 5795 aa4.13□□□□□ -1.75
CSNK2A1-203ENST00000400217 KRTAP5-1Q6L8H4 278 aa4.12□□□□□ -1.75
CSNK2A1-203ENST00000400217 LCE1EQ5T753 118 aa4.07□□□□□ -1.76
CSNK2A1-203ENST00000400217 KRTAP4-4Q9BYR3 166 aa4.02□□□□□ -1.77
CSNK2A1-203ENST00000400217 KRTAP5-10Q6L8G5 202 aa3.95□□□□□ -1.78
CSNK2A1-203ENST00000400217 KRTAP5-8O75690 187 aa3.93□□□□□ -1.78
CSNK2A1-203ENST00000400217 LCE1BQ5T7P3 118 aa3.82□□□□□ -1.8
CSNK2A1-203ENST00000400217 KRTAP5-7Q6L8G8 165 aa3.81□□□□□ -1.8
CSNK2A1-203ENST00000400217 PRM1P04553 51 aa3.8□□□□□ -1.8
CSNK2A1-203ENST00000400217 LCE1CQ5T751 118 aa3.79□□□□□ -1.8
CSNK2A1-203ENST00000400217 MUC5ACP98088 5654 aa3.76□□□□□ -1.81
CSNK2A1-203ENST00000400217 GPR98Q8WXG9 6306 aa3.67□□□□□ -1.82
CSNK2A1-203ENST00000400217 KRTAP21-2Q3LI59 83 aa3.35□□□□□ -1.87
CSNK2A1-203ENST00000400217 MUC5BQ9HC84 5762 aaPredicted RBP3.33□□□□□ -1.88
CSNK2A1-203ENST00000400217 LCE1FQ5T754 118 aa3.22□□□□□ -1.89
CSNK2A1-203ENST00000400217 AHNAKQ09666 5890 aaKnown RBP3.1□□□□□ -1.91
CSNK2A1-203ENST00000400217 PHGR1C9JFL3 82 aa2.87□□□□□ -1.95
CSNK2A1-203ENST00000400217 MUC19Q7Z5P9 8384 aa2.51□□□□□ -2.01
CSNK2A1-203ENST00000400217 KRTAP21-1Q3LI58 79 aa2.32□□□□□ -2.04
CSNK2A1-203ENST00000400217 MUC16Q8WXI7 14507 aa1.88□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 87 ms