RNA–Protein interactions for RNA: ENST00000400183.6

USP25-204, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 1 (best) BASIC

Gene USP25, Length 5,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-204ENST00000400183 ABCA13Q86UQ4 5058 aa5.62□□□□□ -1.51
USP25-204ENST00000400183 FLGP20930 4061 aaPredicted RBP5.6□□□□□ -1.51
USP25-204ENST00000400183 PRM1P04553 51 aa5.59□□□□□ -1.51
USP25-204ENST00000400183 LOC100996750A0A140TA64 210 aa5.59□□□□□ -1.51
USP25-204ENST00000400183 KRTAP4-3Q9BYR4 195 aa5.55□□□□□ -1.52
USP25-204ENST00000400183 KRTAP9-2Q9BYQ4 174 aa5.54□□□□□ -1.52
USP25-204ENST00000400183 LCE1BQ5T7P3 118 aa5.49□□□□□ -1.53
USP25-204ENST00000400183 LCE1DQ5T752 114 aa5.47□□□□□ -1.53
USP25-204ENST00000400183 KRTAP19-7Q3SYF9 63 aa5.44□□□□□ -1.54
USP25-204ENST00000400183 MT1AP04731 61 aa5.42□□□□□ -1.54
USP25-204ENST00000400183 KRTAP2-3P0C7H8 128 aa5.4□□□□□ -1.55
USP25-204ENST00000400183 KRTAP2-4Q9BYR9 128 aa5.4□□□□□ -1.55
USP25-204ENST00000400183 KRTAP2-1Q9BYU5 128 aa5.4□□□□□ -1.55
USP25-204ENST00000400183 UBR4Q5T4S7 5183 aa5.39□□□□□ -1.55
USP25-204ENST00000400183 LCE2AQ5TA79 106 aaPredicted RBP5.38□□□□□ -1.55
USP25-204ENST00000400183 RNF213Q63HN8 5207 aa5.37□□□□□ -1.55
USP25-204ENST00000400183 FSIP2Q5CZC0 6907 aa5.33□□□□□ -1.56
USP25-204ENST00000400183 FAT4Q6V0I7 4981 aa5.3□□□□□ -1.56
USP25-204ENST00000400183 KRTAP4-9Q9BYQ8 210 aa5.26□□□□□ -1.57
USP25-204ENST00000400183 HMCN2Q8NDA2 5059 aa5.23□□□□□ -1.57
USP25-204ENST00000400183 KRTAP9-6A0A140TA67 174 aa5.23□□□□□ -1.57
USP25-204ENST00000400183 MUC2Q02817 5179 aa5.22□□□□□ -1.57
USP25-204ENST00000400183 OBSCNQ5VST9 7968 aa5.21□□□□□ -1.57
USP25-204ENST00000400183 KRTAP9-6A8MVA2 160 aa5.17□□□□□ -1.58
USP25-204ENST00000400183 LCE1AQ5T7P2 110 aa5.13□□□□□ -1.59
USP25-204ENST00000400183 LCE5AQ5TCM9 118 aa5.13□□□□□ -1.59
USP25-204ENST00000400183 KRTAP20-1Q3LI63 56 aa5.09□□□□□ -1.6
USP25-204ENST00000400183 SYNE2Q8WXH0 6885 aaKnown RBP5.06□□□□□ -1.6
USP25-204ENST00000400183 KRTAP6-1Q3LI64 71 aa5.01□□□□□ -1.61
USP25-204ENST00000400183 KRTAP6-3Q3LI67 103 aa5.01□□□□□ -1.61
USP25-204ENST00000400183 KRTAP9-7A8MTY7 169 aa4.99□□□□□ -1.61
USP25-204ENST00000400183 KRTAP6-2Q3LI66 62 aa4.98□□□□□ -1.61
USP25-204ENST00000400183 KRTAP9-4Q9BYQ2 154 aa4.95□□□□□ -1.62
USP25-204ENST00000400183 LCE4AQ5TA78 99 aa4.9□□□□□ -1.63
USP25-204ENST00000400183 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.79□□□□□ -1.64
USP25-204ENST00000400183 KRTAP2-2Q9BYT5 123 aa4.78□□□□□ -1.64
USP25-204ENST00000400183 LCE1CQ5T751 118 aa4.68□□□□□ -1.66
USP25-204ENST00000400183 LCE1EQ5T753 118 aa4.68□□□□□ -1.66
USP25-204ENST00000400183 LCE1FQ5T754 118 aa4.68□□□□□ -1.66
USP25-204ENST00000400183 USH2AO75445 5202 aa4.67□□□□□ -1.66
USP25-204ENST00000400183 FCGBPQ9Y6R7 5405 aaPredicted RBP4.64□□□□□ -1.67
USP25-204ENST00000400183 DSTQ03001 7570 aaKnown RBP4.59□□□□□ -1.68
USP25-204ENST00000400183 MACF1Q9UPN3 7388 aaKnown RBP4.5□□□□□ -1.69
USP25-204ENST00000400183 KMT2DO14686 5537 aa4.41□□□□□ -1.7
USP25-204ENST00000400183 KRTAP9-9Q9BYP9 154 aa4.3□□□□□ -1.72
USP25-204ENST00000400183 MUC19Q7Z5P9 8384 aa4.26□□□□□ -1.73
USP25-204ENST00000400183 NEBP20929 6669 aa4.23□□□□□ -1.73
USP25-204ENST00000400183 KRTAP5-9P26371 169 aa4.2□□□□□ -1.74
USP25-204ENST00000400183 KRTAP4-11Q9BYQ6 195 aa4.12□□□□□ -1.75
USP25-204ENST00000400183 MDN1Q9NU22 5596 aa4.1□□□□□ -1.75
USP25-204ENST00000400183 SSPOA2VEC9 5147 aa4.1□□□□□ -1.75
USP25-204ENST00000400183 KRTAP4-6Q9BYQ5 205 aa4.09□□□□□ -1.75
USP25-204ENST00000400183 KRTAP20-2Q3LI61 65 aa4.07□□□□□ -1.76
USP25-204ENST00000400183 GPR98Q8WXG9 6306 aa4.05□□□□□ -1.76
USP25-204ENST00000400183 MUC12Q9UKN1 5478 aa4.02□□□□□ -1.77
USP25-204ENST00000400183 KRTAP5-5Q701N2 237 aaPredicted RBP3.94□□□□□ -1.78
USP25-204ENST00000400183 KRTAP4-4Q9BYR3 166 aa3.77□□□□□ -1.81
USP25-204ENST00000400183 KRTAP5-4Q6L8H1 288 aa3.74□□□□□ -1.81
USP25-204ENST00000400183 KRTAP4-12Q9BQ66 201 aa3.72□□□□□ -1.81
USP25-204ENST00000400183 KRTAP4-2Q9BYR5 136 aa3.72□□□□□ -1.81
USP25-204ENST00000400183 MUC5ACP98088 5654 aa3.42□□□□□ -1.86
USP25-204ENST00000400183 HMCN1Q96RW7 5635 aa3.32□□□□□ -1.88
USP25-204ENST00000400183 KRTAP5-3Q6L8H2 238 aa3.29□□□□□ -1.88
USP25-204ENST00000400183 AHNAK2Q8IVF2 5795 aa3.24□□□□□ -1.89
USP25-204ENST00000400183 KRTAP5-10Q6L8G5 202 aa3.03□□□□□ -1.92
USP25-204ENST00000400183 KRTAP5-8O75690 187 aa3□□□□□ -1.93
USP25-204ENST00000400183 KRTAP5-2Q701N4 177 aa2.85□□□□□ -1.95
USP25-204ENST00000400183 MUC5BQ9HC84 5762 aaPredicted RBP2.78□□□□□ -1.96
USP25-204ENST00000400183 PHGR1C9JFL3 82 aa2.78□□□□□ -1.96
USP25-204ENST00000400183 AHNAKQ09666 5890 aaKnown RBP2.73□□□□□ -1.97
USP25-204ENST00000400183 KRTAP5-11Q6L8G4 156 aa2.67□□□□□ -1.98
USP25-204ENST00000400183 KRTAP5-1Q6L8H4 278 aa2.61□□□□□ -1.99
USP25-204ENST00000400183 KRTAP21-2Q3LI59 83 aa2.5□□□□□ -2.01
USP25-204ENST00000400183 KRTAP21-1Q3LI58 79 aa2.5□□□□□ -2.01
USP25-204ENST00000400183 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.29□□□□□ -2.04
USP25-204ENST00000400183 KRTAP5-7Q6L8G8 165 aa1.99□□□□□ -2.09
USP25-204ENST00000400183 MUC16Q8WXI7 14507 aa1.64□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 13.3 ms