RNA–Protein interactions for RNA: ENST00000399362.8

CLASP2-204, Transcript of cytoplasmic linker associated protein 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CLASP2, Length 7,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLASP2-204ENST00000399362 KRTAP20-1Q3LI63 56 aa4.41□□□□□ -1.7
CLASP2-204ENST00000399362 KIAA1109Q2LD37 5005 aa4.37□□□□□ -1.71
CLASP2-204ENST00000399362 MUC17Q685J3 4493 aa4.33□□□□□ -1.72
CLASP2-204ENST00000399362 RYR2Q92736 4967 aa4.3□□□□□ -1.72
CLASP2-204ENST00000399362 KRTAP19-2Q3LHN2 52 aa4.28□□□□□ -1.72
CLASP2-204ENST00000399362 KRTAP9-7A8MTY7 169 aa4.28□□□□□ -1.72
CLASP2-204ENST00000399362 LCE1CQ5T751 118 aa4.26□□□□□ -1.73
CLASP2-204ENST00000399362 LCE1EQ5T753 118 aa4.26□□□□□ -1.73
CLASP2-204ENST00000399362 LCE1FQ5T754 118 aa4.26□□□□□ -1.73
CLASP2-204ENST00000399362 LCE1AQ5T7P2 110 aa4.26□□□□□ -1.73
CLASP2-204ENST00000399362 KMT2CQ8NEZ4 4911 aaKnown RBP4.23□□□□□ -1.73
CLASP2-204ENST00000399362 BIRC6Q9NR09 4857 aa4.2□□□□□ -1.74
CLASP2-204ENST00000399362 FSIP2Q5CZC0 6907 aa4.18□□□□□ -1.74
CLASP2-204ENST00000399362 HERC2O95714 4834 aa4.16□□□□□ -1.74
CLASP2-204ENST00000399362 LCE4AQ5TA78 99 aa4.14□□□□□ -1.75
CLASP2-204ENST00000399362 HERC1Q15751 4861 aa4.13□□□□□ -1.75
CLASP2-204ENST00000399362 KRTAP2-3P0C7H8 128 aa4.12□□□□□ -1.75
CLASP2-204ENST00000399362 KRTAP2-4Q9BYR9 128 aa4.12□□□□□ -1.75
CLASP2-204ENST00000399362 KRTAP2-1Q9BYU5 128 aa4.12□□□□□ -1.75
CLASP2-204ENST00000399362 KRTAP6-2Q3LI66 62 aa4.11□□□□□ -1.75
CLASP2-204ENST00000399362 MT1AP04731 61 aa4.07□□□□□ -1.76
CLASP2-204ENST00000399362 KRTAP19-7Q3SYF9 63 aa4.04□□□□□ -1.76
CLASP2-204ENST00000399362 KRTAP6-1Q3LI64 71 aa4.01□□□□□ -1.77
CLASP2-204ENST00000399362 LCE2AQ5TA79 106 aaPredicted RBP4□□□□□ -1.77
CLASP2-204ENST00000399362 PCLOQ9Y6V0 5065 aa3.99□□□□□ -1.77
CLASP2-204ENST00000399362 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.99□□□□□ -1.77
CLASP2-204ENST00000399362 HMCN2Q8NDA2 5059 aa3.94□□□□□ -1.78
CLASP2-204ENST00000399362 ABCA13Q86UQ4 5058 aa3.94□□□□□ -1.78
CLASP2-204ENST00000399362 KRTAP6-3Q3LI67 103 aa3.9□□□□□ -1.78
CLASP2-204ENST00000399362 EPPK1P58107 5090 aaKnown RBP3.88□□□□□ -1.79
CLASP2-204ENST00000399362 KRTAP9-4Q9BYQ2 154 aa3.88□□□□□ -1.79
CLASP2-204ENST00000399362 KRTAP2-2Q9BYT5 123 aa3.87□□□□□ -1.79
CLASP2-204ENST00000399362 KRTAP9-9Q9BYP9 154 aa3.72□□□□□ -1.81
CLASP2-204ENST00000399362 KRTAP9-6A8MVA2 160 aa3.72□□□□□ -1.81
CLASP2-204ENST00000399362 MUC2Q02817 5179 aa3.7□□□□□ -1.82
CLASP2-204ENST00000399362 RNF213Q63HN8 5207 aa3.69□□□□□ -1.82
CLASP2-204ENST00000399362 FAT4Q6V0I7 4981 aa3.62□□□□□ -1.83
CLASP2-204ENST00000399362 SYNE1Q8NF91 8797 aaKnown RBP3.61□□□□□ -1.83
CLASP2-204ENST00000399362 UBR4Q5T4S7 5183 aa3.58□□□□□ -1.84
CLASP2-204ENST00000399362 OBSCNQ5VST9 7968 aa3.52□□□□□ -1.85
CLASP2-204ENST00000399362 KRTAP20-2Q3LI61 65 aa3.5□□□□□ -1.85
CLASP2-204ENST00000399362 KRTAP4-11Q9BYQ6 195 aa3.49□□□□□ -1.85
CLASP2-204ENST00000399362 KRTAP4-6Q9BYQ5 205 aa3.48□□□□□ -1.85
CLASP2-204ENST00000399362 KMT2DO14686 5537 aa3.45□□□□□ -1.86
CLASP2-204ENST00000399362 KRTAP4-4Q9BYR3 166 aa3.45□□□□□ -1.86
CLASP2-204ENST00000399362 KRTAP4-12Q9BQ66 201 aa3.42□□□□□ -1.86
CLASP2-204ENST00000399362 KRTAP4-2Q9BYR5 136 aa3.42□□□□□ -1.86
CLASP2-204ENST00000399362 DSTQ03001 7570 aaKnown RBP3.31□□□□□ -1.88
CLASP2-204ENST00000399362 FCGBPQ9Y6R7 5405 aaPredicted RBP3.22□□□□□ -1.89
CLASP2-204ENST00000399362 MACF1Q9UPN3 7388 aaKnown RBP3.15□□□□□ -1.91
CLASP2-204ENST00000399362 USH2AO75445 5202 aa3.12□□□□□ -1.91
CLASP2-204ENST00000399362 KRTAP5-9P26371 169 aa3.02□□□□□ -1.93
CLASP2-204ENST00000399362 NEBP20929 6669 aa3□□□□□ -1.93
CLASP2-204ENST00000399362 SSPOA2VEC9 5147 aa2.93□□□□□ -1.94
CLASP2-204ENST00000399362 KRTAP5-4Q6L8H1 288 aa2.87□□□□□ -1.95
CLASP2-204ENST00000399362 MUC19Q7Z5P9 8384 aa2.8□□□□□ -1.96
CLASP2-204ENST00000399362 MUC12Q9UKN1 5478 aa2.74□□□□□ -1.97
CLASP2-204ENST00000399362 KRTAP5-5Q701N2 237 aaPredicted RBP2.72□□□□□ -1.97
CLASP2-204ENST00000399362 MDN1Q9NU22 5596 aa2.61□□□□□ -1.99
CLASP2-204ENST00000399362 KRTAP5-3Q6L8H2 238 aa2.59□□□□□ -2
CLASP2-204ENST00000399362 PHGR1C9JFL3 82 aa2.54□□□□□ -2
CLASP2-204ENST00000399362 KRTAP5-8O75690 187 aa2.45□□□□□ -2.02
CLASP2-204ENST00000399362 MUC5ACP98088 5654 aa2.33□□□□□ -2.04
CLASP2-204ENST00000399362 GPR98Q8WXG9 6306 aa2.31□□□□□ -2.04
CLASP2-204ENST00000399362 HMCN1Q96RW7 5635 aa2.15□□□□□ -2.07
CLASP2-204ENST00000399362 KRTAP5-2Q701N4 177 aa2.13□□□□□ -2.07
CLASP2-204ENST00000399362 KRTAP5-10Q6L8G5 202 aa2.11□□□□□ -2.07
CLASP2-204ENST00000399362 KRTAP5-1Q6L8H4 278 aa2.01□□□□□ -2.09
CLASP2-204ENST00000399362 AHNAK2Q8IVF2 5795 aa1.99□□□□□ -2.09
CLASP2-204ENST00000399362 MUC5BQ9HC84 5762 aaPredicted RBP1.9□□□□□ -2.1
CLASP2-204ENST00000399362 KRTAP5-11Q6L8G4 156 aa1.83□□□□□ -2.12
CLASP2-204ENST00000399362 KRTAP21-2Q3LI59 83 aa1.78□□□□□ -2.12
CLASP2-204ENST00000399362 KRTAP21-1Q3LI58 79 aa1.73□□□□□ -2.13
CLASP2-204ENST00000399362 AHNAKQ09666 5890 aaKnown RBP1.68□□□□□ -2.14
CLASP2-204ENST00000399362 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.62□□□□□ -2.15
CLASP2-204ENST00000399362 KRTAP5-7Q6L8G8 165 aa1.44□□□□□ -2.18
CLASP2-204ENST00000399362 MUC16Q8WXI7 14507 aa1.44□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 13.5 ms