RNA–Protein interactions for RNA: ENST00000398148.7

KHSRP-201, Transcript of KH-type splicing regulatory protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene KHSRP, Length 2,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHSRP-201ENST00000398148 MT1LQ93083 61 aa7.99□□□□□ -1.13
KHSRP-201ENST00000398148 SSPOA2VEC9 5147 aa7.98□□□□□ -1.13
KHSRP-201ENST00000398148 MT1EP04732 61 aa7.92□□□□□ -1.14
KHSRP-201ENST00000398148 LCE2AQ5TA79 106 aaPredicted RBP7.89□□□□□ -1.15
KHSRP-201ENST00000398148 MT1GP13640 62 aa7.83□□□□□ -1.16
KHSRP-201ENST00000398148 SYNE1Q8NF91 8797 aaKnown RBP7.8□□□□□ -1.16
KHSRP-201ENST00000398148 OBSCNQ5VST9 7968 aa7.61□□□□□ -1.19
KHSRP-201ENST00000398148 KRTAP12-4P60329 112 aa7.58□□□□□ -1.2
KHSRP-201ENST00000398148 LCE2DQ5TA82 110 aaPredicted RBP7.52□□□□□ -1.21
KHSRP-201ENST00000398148 KRTAP4-9Q9BYQ8 210 aa7.47□□□□□ -1.21
KHSRP-201ENST00000398148 KRTAP19-4Q3LI73 84 aa7.44□□□□□ -1.22
KHSRP-201ENST00000398148 LCE3BQ5TA77 95 aa7.41□□□□□ -1.22
KHSRP-201ENST00000398148 MT1MQ8N339 61 aa7.4□□□□□ -1.22
KHSRP-201ENST00000398148 SYNE2Q8WXH0 6885 aaKnown RBP7.38□□□□□ -1.23
KHSRP-201ENST00000398148 KRTAP19-3Q7Z4W3 81 aa7.3□□□□□ -1.24
KHSRP-201ENST00000398148 KRTAP19-6Q3LI70 58 aa7.27□□□□□ -1.25
KHSRP-201ENST00000398148 SPRR2FQ96RM1 72 aa7.18□□□□□ -1.26
KHSRP-201ENST00000398148 MACF1Q9UPN3 7388 aaKnown RBP7.15□□□□□ -1.27
KHSRP-201ENST00000398148 MDN1Q9NU22 5596 aa7.09□□□□□ -1.27
KHSRP-201ENST00000398148 KRTAP6-1Q3LI64 71 aa6.95□□□□□ -1.3
KHSRP-201ENST00000398148 LCE5AQ5TCM9 118 aa6.94□□□□□ -1.3
KHSRP-201ENST00000398148 KRTAP9-7A8MTY7 169 aa6.93□□□□□ -1.3
KHSRP-201ENST00000398148 KRTAP9-2Q9BYQ4 174 aa6.89□□□□□ -1.31
KHSRP-201ENST00000398148 LCE3DQ9BYE3 92 aa6.81□□□□□ -1.32
KHSRP-201ENST00000398148 PRM1P04553 51 aa6.79□□□□□ -1.32
KHSRP-201ENST00000398148 LCE3EQ5T5B0 92 aa6.7□□□□□ -1.34
KHSRP-201ENST00000398148 KRTAP5-5Q701N2 237 aaPredicted RBP6.66□□□□□ -1.34
KHSRP-201ENST00000398148 MT1AP04731 61 aa6.63□□□□□ -1.35
KHSRP-201ENST00000398148 KRTAP6-2Q3LI66 62 aa6.42□□□□□ -1.38
KHSRP-201ENST00000398148 LCE1AQ5T7P2 110 aa6.38□□□□□ -1.39
KHSRP-201ENST00000398148 SPRR2EP22531 72 aa6.32□□□□□ -1.4
KHSRP-201ENST00000398148 SPRR2BP35325 72 aa6.32□□□□□ -1.4
KHSRP-201ENST00000398148 SPRR2AP35326 72 aa6.32□□□□□ -1.4
KHSRP-201ENST00000398148 KRTAP9-4Q9BYQ2 154 aa6.18□□□□□ -1.42
KHSRP-201ENST00000398148 KRTAP9-6A0A140TA67 174 aa6.05□□□□□ -1.44
KHSRP-201ENST00000398148 KRTAP5-9P26371 169 aa6□□□□□ -1.45
KHSRP-201ENST00000398148 KRTAP6-3Q3LI67 103 aa6□□□□□ -1.45
KHSRP-201ENST00000398148 SPRR2DP22532 72 aa5.98□□□□□ -1.45
KHSRP-201ENST00000398148 MT3P25713 68 aa5.91□□□□□ -1.46
KHSRP-201ENST00000398148 KRTAP2-2Q9BYT5 123 aa5.85□□□□□ -1.47
KHSRP-201ENST00000398148 MT4P47944 62 aa5.61□□□□□ -1.51
KHSRP-201ENST00000398148 KRTAP4-6Q9BYQ5 205 aa5.58□□□□□ -1.52
KHSRP-201ENST00000398148 MUC5ACP98088 5654 aa5.35□□□□□ -1.55
KHSRP-201ENST00000398148 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.33□□□□□ -1.56
KHSRP-201ENST00000398148 LCE1DQ5T752 114 aa5.31□□□□□ -1.56
KHSRP-201ENST00000398148 LCE1EQ5T753 118 aa5.3□□□□□ -1.56
KHSRP-201ENST00000398148 KRTAP5-4Q6L8H1 288 aa5.26□□□□□ -1.57
KHSRP-201ENST00000398148 KRTAP4-11Q9BYQ6 195 aa5.24□□□□□ -1.57
KHSRP-201ENST00000398148 HMCN1Q96RW7 5635 aa5.23□□□□□ -1.57
KHSRP-201ENST00000398148 LCE1BQ5T7P3 118 aa5.19□□□□□ -1.58
KHSRP-201ENST00000398148 NEBP20929 6669 aa5.19□□□□□ -1.58
KHSRP-201ENST00000398148 KRTAP20-2Q3LI61 65 aa5.14□□□□□ -1.59
KHSRP-201ENST00000398148 KRTAP5-2Q701N4 177 aa4.97□□□□□ -1.61
KHSRP-201ENST00000398148 MUC19Q7Z5P9 8384 aa4.93□□□□□ -1.62
KHSRP-201ENST00000398148 KRTAP5-10Q6L8G5 202 aa4.83□□□□□ -1.64
KHSRP-201ENST00000398148 LCE4AQ5TA78 99 aa4.81□□□□□ -1.64
KHSRP-201ENST00000398148 KRTAP5-3Q6L8H2 238 aa4.76□□□□□ -1.65
KHSRP-201ENST00000398148 KRTAP20-1Q3LI63 56 aa4.64□□□□□ -1.67
KHSRP-201ENST00000398148 KRTAP5-1Q6L8H4 278 aa4.59□□□□□ -1.68
KHSRP-201ENST00000398148 KRTAP4-4Q9BYR3 166 aa4.52□□□□□ -1.69
KHSRP-201ENST00000398148 KRTAP4-2Q9BYR5 136 aa4.5□□□□□ -1.69
KHSRP-201ENST00000398148 LCE1CQ5T751 118 aa4.33□□□□□ -1.72
KHSRP-201ENST00000398148 KRTAP21-2Q3LI59 83 aa4.32□□□□□ -1.72
KHSRP-201ENST00000398148 MUC5BQ9HC84 5762 aaPredicted RBP4.2□□□□□ -1.74
KHSRP-201ENST00000398148 KRTAP21-1Q3LI58 79 aa4.1□□□□□ -1.75
KHSRP-201ENST00000398148 KRTAP4-12Q9BQ66 201 aa4.08□□□□□ -1.76
KHSRP-201ENST00000398148 AHNAK2Q8IVF2 5795 aa4.07□□□□□ -1.76
KHSRP-201ENST00000398148 LCE1FQ5T754 118 aa4.06□□□□□ -1.76
KHSRP-201ENST00000398148 KRTAP9-9Q9BYP9 154 aa4.02□□□□□ -1.77
KHSRP-201ENST00000398148 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.01□□□□□ -1.77
KHSRP-201ENST00000398148 KRTAP5-8O75690 187 aa3.92□□□□□ -1.78
KHSRP-201ENST00000398148 GPR98Q8WXG9 6306 aa3.92□□□□□ -1.78
KHSRP-201ENST00000398148 KRTAP5-11Q6L8G4 156 aa3.65□□□□□ -1.82
KHSRP-201ENST00000398148 KRTAP5-7Q6L8G8 165 aa3.62□□□□□ -1.83
KHSRP-201ENST00000398148 PHGR1C9JFL3 82 aa3.23□□□□□ -1.89
KHSRP-201ENST00000398148 AHNAKQ09666 5890 aaKnown RBP3.16□□□□□ -1.9
KHSRP-201ENST00000398148 MUC16Q8WXI7 14507 aa2.26□□□□□ -2.05
Retrieved 77 of 20,778 RNA–protein pairs in 5.9 ms