RNA–Protein interactions for RNA: ENST00000397677.5

CHMP7-202, Transcript of charged multivesicular body protein 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP7, Length 3,403 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP7-202ENST00000397677 KRTAP12-4P60329 112 aa4.58□□□□□ -1.68
CHMP7-202ENST00000397677 MT1LQ93083 61 aa4.56□□□□□ -1.68
CHMP7-202ENST00000397677 KRTAP4-3Q9BYR4 195 aa4.53□□□□□ -1.68
CHMP7-202ENST00000397677 MUC12Q9UKN1 5478 aa4.52□□□□□ -1.69
CHMP7-202ENST00000397677 MT1EP04732 61 aa4.48□□□□□ -1.69
CHMP7-202ENST00000397677 MT1GP13640 62 aa4.47□□□□□ -1.69
CHMP7-202ENST00000397677 SSPOA2VEC9 5147 aa4.38□□□□□ -1.71
CHMP7-202ENST00000397677 KRTAP4-9Q9BYQ8 210 aa4.35□□□□□ -1.71
CHMP7-202ENST00000397677 SYNE2Q8WXH0 6885 aaKnown RBP4.29□□□□□ -1.72
CHMP7-202ENST00000397677 LCE3BQ5TA77 95 aa4.29□□□□□ -1.72
CHMP7-202ENST00000397677 LCE2AQ5TA79 106 aaPredicted RBP4.24□□□□□ -1.73
CHMP7-202ENST00000397677 KRTAP19-4Q3LI73 84 aa4.23□□□□□ -1.73
CHMP7-202ENST00000397677 MT1MQ8N339 61 aa4.17□□□□□ -1.74
CHMP7-202ENST00000397677 LCE2DQ5TA82 110 aaPredicted RBP4.17□□□□□ -1.74
CHMP7-202ENST00000397677 KRTAP9-7A8MTY7 169 aa4.16□□□□□ -1.74
CHMP7-202ENST00000397677 KRTAP9-2Q9BYQ4 174 aa4.13□□□□□ -1.75
CHMP7-202ENST00000397677 PRM1P04553 51 aa4.12□□□□□ -1.75
CHMP7-202ENST00000397677 SPRR2FQ96RM1 72 aa4.11□□□□□ -1.75
CHMP7-202ENST00000397677 KRTAP19-3Q7Z4W3 81 aa4.09□□□□□ -1.75
CHMP7-202ENST00000397677 MACF1Q9UPN3 7388 aaKnown RBP4.06□□□□□ -1.76
CHMP7-202ENST00000397677 LCE3DQ9BYE3 92 aa4.03□□□□□ -1.76
CHMP7-202ENST00000397677 MDN1Q9NU22 5596 aa4.02□□□□□ -1.77
CHMP7-202ENST00000397677 LCE3EQ5T5B0 92 aa3.99□□□□□ -1.77
CHMP7-202ENST00000397677 KRTAP5-5Q701N2 237 aaPredicted RBP3.98□□□□□ -1.77
CHMP7-202ENST00000397677 KRTAP6-1Q3LI64 71 aa3.96□□□□□ -1.78
CHMP7-202ENST00000397677 KRTAP6-3Q3LI67 103 aa3.92□□□□□ -1.78
CHMP7-202ENST00000397677 MT1AP04731 61 aa3.89□□□□□ -1.79
CHMP7-202ENST00000397677 KRTAP9-6A0A140TA67 174 aa3.88□□□□□ -1.79
CHMP7-202ENST00000397677 KRTAP19-6Q3LI70 58 aa3.88□□□□□ -1.79
CHMP7-202ENST00000397677 LCE1AQ5T7P2 110 aa3.88□□□□□ -1.79
CHMP7-202ENST00000397677 LCE5AQ5TCM9 118 aa3.85□□□□□ -1.79
CHMP7-202ENST00000397677 KRTAP6-2Q3LI66 62 aa3.82□□□□□ -1.8
CHMP7-202ENST00000397677 KRTAP2-2Q9BYT5 123 aa3.7□□□□□ -1.82
CHMP7-202ENST00000397677 LCE1EQ5T753 118 aa3.67□□□□□ -1.82
CHMP7-202ENST00000397677 SPRR2EP22531 72 aa3.64□□□□□ -1.83
CHMP7-202ENST00000397677 SPRR2BP35325 72 aa3.64□□□□□ -1.83
CHMP7-202ENST00000397677 SPRR2AP35326 72 aa3.64□□□□□ -1.83
CHMP7-202ENST00000397677 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.54□□□□□ -1.84
CHMP7-202ENST00000397677 KRTAP9-4Q9BYQ2 154 aa3.5□□□□□ -1.85
CHMP7-202ENST00000397677 LCE1DQ5T752 114 aa3.49□□□□□ -1.85
CHMP7-202ENST00000397677 SPRR2DP22532 72 aa3.44□□□□□ -1.86
CHMP7-202ENST00000397677 MT3P25713 68 aa3.37□□□□□ -1.87
CHMP7-202ENST00000397677 MT4P47944 62 aa3.29□□□□□ -1.88
CHMP7-202ENST00000397677 MUC19Q7Z5P9 8384 aa3.23□□□□□ -1.89
CHMP7-202ENST00000397677 KRTAP5-9P26371 169 aa3.14□□□□□ -1.91
CHMP7-202ENST00000397677 KRTAP4-11Q9BYQ6 195 aa3.14□□□□□ -1.91
CHMP7-202ENST00000397677 NEBP20929 6669 aa3.12□□□□□ -1.91
CHMP7-202ENST00000397677 KRTAP4-6Q9BYQ5 205 aa3.1□□□□□ -1.91
CHMP7-202ENST00000397677 KRTAP20-1Q3LI63 56 aa3.06□□□□□ -1.92
CHMP7-202ENST00000397677 MUC5ACP98088 5654 aa3.05□□□□□ -1.92
CHMP7-202ENST00000397677 LCE1BQ5T7P3 118 aa3.04□□□□□ -1.92
CHMP7-202ENST00000397677 LCE1FQ5T754 118 aa2.93□□□□□ -1.94
CHMP7-202ENST00000397677 HMCN1Q96RW7 5635 aa2.92□□□□□ -1.94
CHMP7-202ENST00000397677 KRTAP5-4Q6L8H1 288 aa2.85□□□□□ -1.95
CHMP7-202ENST00000397677 KRTAP5-10Q6L8G5 202 aa2.83□□□□□ -1.96
CHMP7-202ENST00000397677 KRTAP20-2Q3LI61 65 aa2.78□□□□□ -1.96
CHMP7-202ENST00000397677 KRTAP5-2Q701N4 177 aa2.69□□□□□ -1.98
CHMP7-202ENST00000397677 LCE4AQ5TA78 99 aa2.62□□□□□ -1.99
CHMP7-202ENST00000397677 KRTAP5-1Q6L8H4 278 aa2.61□□□□□ -1.99
CHMP7-202ENST00000397677 KRTAP4-4Q9BYR3 166 aa2.57□□□□□ -2
CHMP7-202ENST00000397677 KRTAP5-3Q6L8H2 238 aa2.54□□□□□ -2
CHMP7-202ENST00000397677 GPR98Q8WXG9 6306 aa2.54□□□□□ -2
CHMP7-202ENST00000397677 MUC5BQ9HC84 5762 aaPredicted RBP2.49□□□□□ -2.01
CHMP7-202ENST00000397677 KRTAP4-2Q9BYR5 136 aa2.49□□□□□ -2.01
CHMP7-202ENST00000397677 KRTAP21-1Q3LI58 79 aa2.48□□□□□ -2.01
CHMP7-202ENST00000397677 LCE1CQ5T751 118 aa2.47□□□□□ -2.01
CHMP7-202ENST00000397677 KRTAP21-2Q3LI59 83 aa2.45□□□□□ -2.02
CHMP7-202ENST00000397677 AHNAK2Q8IVF2 5795 aa2.4□□□□□ -2.02
CHMP7-202ENST00000397677 KRTAP4-12Q9BQ66 201 aa2.4□□□□□ -2.03
CHMP7-202ENST00000397677 KRTAP9-9Q9BYP9 154 aa2.32□□□□□ -2.04
CHMP7-202ENST00000397677 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.2□□□□□ -2.06
CHMP7-202ENST00000397677 KRTAP5-8O75690 187 aa2.19□□□□□ -2.06
CHMP7-202ENST00000397677 KRTAP5-11Q6L8G4 156 aa1.99□□□□□ -2.09
CHMP7-202ENST00000397677 KRTAP5-7Q6L8G8 165 aa1.98□□□□□ -2.09
CHMP7-202ENST00000397677 AHNAKQ09666 5890 aaKnown RBP1.9□□□□□ -2.11
CHMP7-202ENST00000397677 PHGR1C9JFL3 82 aa1.76□□□□□ -2.13
CHMP7-202ENST00000397677 MUC16Q8WXI7 14507 aa1.32□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 184.3 ms