RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 A0A0D9SG42 100 aa2.8□□□□□ -1.96
SMCO1-201ENST00000397537 A0A096LNI7 61 aa2.79□□□□□ -1.96
SMCO1-201ENST00000397537 KRTAP10-5P60370 271 aa2.79□□□□□ -1.96
SMCO1-201ENST00000397537 MACF1Q9UPN3 7388 aaKnown RBP2.79□□□□□ -1.96
SMCO1-201ENST00000397537 MUC17Q685J3 4493 aa2.77□□□□□ -1.97
SMCO1-201ENST00000397537 SPINK6Q6UWN8 80 aa2.77□□□□□ -1.97
SMCO1-201ENST00000397537 H3BNG1 76 aa2.76□□□□□ -1.97
SMCO1-201ENST00000397537 KRTAP5-2Q701N4 177 aa2.75□□□□□ -1.97
SMCO1-201ENST00000397537 LINC01556Q5JQF7 62 aa2.74□□□□□ -1.97
SMCO1-201ENST00000397537 LCE3DQ9BYE3 92 aa2.74□□□□□ -1.97
SMCO1-201ENST00000397537 KRTAP20-1Q3LI63 56 aa2.72□□□□□ -1.97
SMCO1-201ENST00000397537 KRTAP13-1Q8IUC0 172 aa2.72□□□□□ -1.97
SMCO1-201ENST00000397537 GPR98Q8WXG9 6306 aa2.71□□□□□ -1.97
SMCO1-201ENST00000397537 KRTAP4-3Q9BYR4 195 aa2.69□□□□□ -1.98
SMCO1-201ENST00000397537 M0QZ58 72 aa2.68□□□□□ -1.98
SMCO1-201ENST00000397537 KRTAP12-4P60329 112 aa2.65□□□□□ -1.99
SMCO1-201ENST00000397537 MUC12Q9UKN1 5478 aa2.62□□□□□ -1.99
SMCO1-201ENST00000397537 MT1HP80294 61 aa2.62□□□□□ -1.99
SMCO1-201ENST00000397537 KRTAP4-1Q9BYQ7 146 aa2.59□□□□□ -1.99
SMCO1-201ENST00000397537 OBSCNQ5VST9 7968 aa2.59□□□□□ -2
SMCO1-201ENST00000397537 KMT2DO14686 5537 aa2.58□□□□□ -2
SMCO1-201ENST00000397537 KRTAP9-6A8MVA2 160 aa2.56□□□□□ -2
SMCO1-201ENST00000397537 KRTAP19-2Q3LHN2 52 aa2.56□□□□□ -2
SMCO1-201ENST00000397537 KRTAP2-3P0C7H8 128 aa2.52□□□□□ -2.01
SMCO1-201ENST00000397537 KRTAP2-4Q9BYR9 128 aa2.52□□□□□ -2.01
SMCO1-201ENST00000397537 M0R2T5 61 aa2.49□□□□□ -2.01
SMCO1-201ENST00000397537 MDN1Q9NU22 5596 aa2.49□□□□□ -2.01
SMCO1-201ENST00000397537 FLGP20930 4061 aaPredicted RBP2.48□□□□□ -2.01
SMCO1-201ENST00000397537 KRTAP19-6Q3LI70 58 aa2.45□□□□□ -2.02
SMCO1-201ENST00000397537 RPS29P62273 56 aaKnown RBP2.45□□□□□ -2.02
SMCO1-201ENST00000397537 TNP1P09430 55 aa2.42□□□□□ -2.02
SMCO1-201ENST00000397537 KRTAP2-1Q9BYU5 128 aa2.41□□□□□ -2.02
SMCO1-201ENST00000397537 KRTAP12-3P60328 96 aa2.4□□□□□ -2.02
SMCO1-201ENST00000397537 KRTAP5-8O75690 187 aa2.4□□□□□ -2.03
SMCO1-201ENST00000397537 MT2AP02795 61 aa2.31□□□□□ -2.04
SMCO1-201ENST00000397537 C9orf92A6NGG3 77 aa2.31□□□□□ -2.04
SMCO1-201ENST00000397537 MT1FP04733 61 aa2.28□□□□□ -2.04
SMCO1-201ENST00000397537 AHNAK2Q8IVF2 5795 aa2.27□□□□□ -2.05
SMCO1-201ENST00000397537 SPRR2EP22531 72 aa2.22□□□□□ -2.05
SMCO1-201ENST00000397537 SPRR2BP35325 72 aa2.22□□□□□ -2.05
SMCO1-201ENST00000397537 SPRR2AP35326 72 aa2.22□□□□□ -2.05
SMCO1-201ENST00000397537 LCE3AQ5TA76 89 aa2.21□□□□□ -2.06
SMCO1-201ENST00000397537 DSTQ03001 7570 aaKnown RBP2.19□□□□□ -2.06
SMCO1-201ENST00000397537 KRTAP5-10Q6L8G5 202 aa2.17□□□□□ -2.06
SMCO1-201ENST00000397537 SPRR2DP22532 72 aa2.16□□□□□ -2.06
SMCO1-201ENST00000397537 KRTAP5-7Q6L8G8 165 aa2.16□□□□□ -2.06
SMCO1-201ENST00000397537 SPRR2FQ96RM1 72 aa2.12□□□□□ -2.07
SMCO1-201ENST00000397537 KRTAP8-1Q8IUC2 63 aa2.09□□□□□ -2.08
SMCO1-201ENST00000397537 AHNAKQ09666 5890 aaKnown RBP2.07□□□□□ -2.08
SMCO1-201ENST00000397537 KRTAP5-5Q701N2 237 aaPredicted RBP2.01□□□□□ -2.09
SMCO1-201ENST00000397537 MUC5BQ9HC84 5762 aaPredicted RBP2□□□□□ -2.09
SMCO1-201ENST00000397537 MT1BP07438 61 aa1.96□□□□□ -2.1
SMCO1-201ENST00000397537 LCE1CQ5T751 118 aa1.94□□□□□ -2.1
SMCO1-201ENST00000397537 LCE1BQ5T7P3 118 aa1.94□□□□□ -2.1
SMCO1-201ENST00000397537 MUC5ACP98088 5654 aa1.93□□□□□ -2.1
SMCO1-201ENST00000397537 MT4P47944 62 aa1.93□□□□□ -2.1
SMCO1-201ENST00000397537 KRTAP19-8Q3LI54 63 aa1.87□□□□□ -2.11
SMCO1-201ENST00000397537 SPRR2GQ9BYE4 73 aa1.79□□□□□ -2.12
SMCO1-201ENST00000397537 PRM1P04553 51 aa1.78□□□□□ -2.12
SMCO1-201ENST00000397537 KRTAP19-5Q3LI72 72 aa1.75□□□□□ -2.13
SMCO1-201ENST00000397537 MT1XP80297 61 aa1.7□□□□□ -2.14
SMCO1-201ENST00000397537 KRTAP20-2Q3LI61 65 aa1.69□□□□□ -2.14
SMCO1-201ENST00000397537 KRTAP19-3Q7Z4W3 81 aa1.68□□□□□ -2.14
SMCO1-201ENST00000397537 MT1AP04731 61 aa1.66□□□□□ -2.14
SMCO1-201ENST00000397537 SYNE1Q8NF91 8797 aaKnown RBP1.59□□□□□ -2.16
SMCO1-201ENST00000397537 MUC19Q7Z5P9 8384 aa1.58□□□□□ -2.16
SMCO1-201ENST00000397537 MT1EP04732 61 aa1.55□□□□□ -2.16
SMCO1-201ENST00000397537 MT1GP13640 62 aa1.54□□□□□ -2.16
SMCO1-201ENST00000397537 KRTAP19-7Q3SYF9 63 aa1.54□□□□□ -2.16
SMCO1-201ENST00000397537 MT1MQ8N339 61 aa1.51□□□□□ -2.17
SMCO1-201ENST00000397537 KRTAP6-2Q3LI66 62 aa1.5□□□□□ -2.17
SMCO1-201ENST00000397537 MT1LQ93083 61 aa1.48□□□□□ -2.17
SMCO1-201ENST00000397537 KRTAP21-2Q3LI59 83 aa1.41□□□□□ -2.18
SMCO1-201ENST00000397537 KRTAP21-1Q3LI58 79 aa1.3□□□□□ -2.2
SMCO1-201ENST00000397537 PHGR1C9JFL3 82 aa1.28□□□□□ -2.2
SMCO1-201ENST00000397537 KRTAP6-1Q3LI64 71 aa1.2□□□□□ -2.22
SMCO1-201ENST00000397537 MUC16Q8WXI7 14507 aa0.74□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 97.8 ms