RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 MDN1Q9NU22 5596 aa7.61□□□□□ -1.19
CPNE1-204ENST00000397443 MT1LQ93083 61 aa7.56□□□□□ -1.2
CPNE1-204ENST00000397443 SPRR2EP22531 72 aa7.51□□□□□ -1.21
CPNE1-204ENST00000397443 SPRR2BP35325 72 aa7.51□□□□□ -1.21
CPNE1-204ENST00000397443 SPRR2AP35326 72 aa7.51□□□□□ -1.21
CPNE1-204ENST00000397443 KRTAP19-3Q7Z4W3 81 aa7.5□□□□□ -1.21
CPNE1-204ENST00000397443 LCE1AQ5T7P2 110 aa7.49□□□□□ -1.21
CPNE1-204ENST00000397443 H3BS24 57 aa7.41□□□□□ -1.22
CPNE1-204ENST00000397443 LCE5AQ5TCM9 118 aa7.39□□□□□ -1.23
CPNE1-204ENST00000397443 MT1GP13640 62 aa7.38□□□□□ -1.23
CPNE1-204ENST00000397443 KRTAP4-7Q9BYR0 210 aa7.37□□□□□ -1.23
CPNE1-204ENST00000397443 MT1MQ8N339 61 aa7.32□□□□□ -1.24
CPNE1-204ENST00000397443 LCE3CQ5T5A8 94 aa7.31□□□□□ -1.24
CPNE1-204ENST00000397443 NEBP20929 6669 aa7.3□□□□□ -1.24
CPNE1-204ENST00000397443 KRTAP4-3Q9BYR4 195 aa7.25□□□□□ -1.25
CPNE1-204ENST00000397443 SPRR2DP22532 72 aa7.23□□□□□ -1.25
CPNE1-204ENST00000397443 KRTAP19-4Q3LI73 84 aa7.21□□□□□ -1.26
CPNE1-204ENST00000397443 DSTQ03001 7570 aaKnown RBP7.15□□□□□ -1.26
CPNE1-204ENST00000397443 LCE3BQ5TA77 95 aa6.96□□□□□ -1.3
CPNE1-204ENST00000397443 SPRR5A0A1B0GTR4 108 aa6.95□□□□□ -1.3
CPNE1-204ENST00000397443 KRTAP9-6A8MVA2 160 aa6.93□□□□□ -1.3
CPNE1-204ENST00000397443 LOC100996750A0A140TA64 210 aa6.93□□□□□ -1.3
CPNE1-204ENST00000397443 KRTAP2-3P0C7H8 128 aa6.84□□□□□ -1.32
CPNE1-204ENST00000397443 KRTAP2-4Q9BYR9 128 aa6.84□□□□□ -1.32
CPNE1-204ENST00000397443 KRTAP20-1Q3LI63 56 aa6.82□□□□□ -1.32
CPNE1-204ENST00000397443 KRTAP2-2Q9BYT5 123 aa6.68□□□□□ -1.34
CPNE1-204ENST00000397443 KRTAP2-1Q9BYU5 128 aa6.68□□□□□ -1.34
CPNE1-204ENST00000397443 LUZP6Q538Z0 58 aa6.66□□□□□ -1.34
CPNE1-204ENST00000397443 KRTAP5-5Q701N2 237 aaPredicted RBP6.58□□□□□ -1.36
CPNE1-204ENST00000397443 A0A0A0MQY5 61 aa6.57□□□□□ -1.36
CPNE1-204ENST00000397443 NDUFAF8A1L188 74 aa6.52□□□□□ -1.37
CPNE1-204ENST00000397443 MT1AP04731 61 aa6.4□□□□□ -1.39
CPNE1-204ENST00000397443 KRTAP5-4Q6L8H1 288 aa6.4□□□□□ -1.39
CPNE1-204ENST00000397443 KRTAP6-1Q3LI64 71 aa6.39□□□□□ -1.39
CPNE1-204ENST00000397443 LCE4AQ5TA78 99 aa6.35□□□□□ -1.39
CPNE1-204ENST00000397443 KRTAP4-9Q9BYQ8 210 aa6.35□□□□□ -1.39
CPNE1-204ENST00000397443 MT4P47944 62 aa6.34□□□□□ -1.39
CPNE1-204ENST00000397443 SYNE1Q8NF91 8797 aaKnown RBP6.31□□□□□ -1.4
CPNE1-204ENST00000397443 LCE1DQ5T752 114 aa6.23□□□□□ -1.41
CPNE1-204ENST00000397443 KRTAP4-6Q9BYQ5 205 aa6.23□□□□□ -1.41
CPNE1-204ENST00000397443 KRTAP12-4P60329 112 aa6.22□□□□□ -1.41
CPNE1-204ENST00000397443 HMCN1Q96RW7 5635 aa6.16□□□□□ -1.42
CPNE1-204ENST00000397443 KRTAP9-4Q9BYQ2 154 aa6.11□□□□□ -1.43
CPNE1-204ENST00000397443 KRTAP20-2Q3LI61 65 aa6.04□□□□□ -1.44
CPNE1-204ENST00000397443 KRTAP6-2Q3LI66 62 aa5.95□□□□□ -1.46
CPNE1-204ENST00000397443 MT3P25713 68 aa5.82□□□□□ -1.48
CPNE1-204ENST00000397443 KRTAP5-3Q6L8H2 238 aa5.8□□□□□ -1.48
CPNE1-204ENST00000397443 KRTAP5-2Q701N4 177 aa5.76□□□□□ -1.49
CPNE1-204ENST00000397443 OBSCNQ5VST9 7968 aa5.57□□□□□ -1.52
CPNE1-204ENST00000397443 AHNAK2Q8IVF2 5795 aa5.56□□□□□ -1.52
CPNE1-204ENST00000397443 LCE3DQ9BYE3 92 aa5.45□□□□□ -1.54
CPNE1-204ENST00000397443 INE1O15225 51 aa5.44□□□□□ -1.54
CPNE1-204ENST00000397443 KRTAP4-11Q9BYQ6 195 aa5.31□□□□□ -1.56
CPNE1-204ENST00000397443 KRTAP5-10Q6L8G5 202 aa5.28□□□□□ -1.56
CPNE1-204ENST00000397443 LCE3EQ5T5B0 92 aa5.26□□□□□ -1.57
CPNE1-204ENST00000397443 GPR98Q8WXG9 6306 aa5.21□□□□□ -1.58
CPNE1-204ENST00000397443 KRTAP5-8O75690 187 aa5.1□□□□□ -1.59
CPNE1-204ENST00000397443 LCE1EQ5T753 118 aa5.07□□□□□ -1.6
CPNE1-204ENST00000397443 KRTAP5-1Q6L8H4 278 aa5.04□□□□□ -1.6
CPNE1-204ENST00000397443 MUC5ACP98088 5654 aa4.91□□□□□ -1.62
CPNE1-204ENST00000397443 KRTAP5-7Q6L8G8 165 aa4.9□□□□□ -1.62
CPNE1-204ENST00000397443 LCE1BQ5T7P3 118 aa4.89□□□□□ -1.63
CPNE1-204ENST00000397443 KRTAP4-2Q9BYR5 136 aa4.78□□□□□ -1.64
CPNE1-204ENST00000397443 LCE1CQ5T751 118 aa4.73□□□□□ -1.65
CPNE1-204ENST00000397443 KRTAP9-9Q9BYP9 154 aa4.68□□□□□ -1.66
CPNE1-204ENST00000397443 MUC5BQ9HC84 5762 aaPredicted RBP4.51□□□□□ -1.69
CPNE1-204ENST00000397443 PRM1P04553 51 aa4.5□□□□□ -1.69
CPNE1-204ENST00000397443 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.36□□□□□ -1.71
CPNE1-204ENST00000397443 AHNAKQ09666 5890 aaKnown RBP4.27□□□□□ -1.73
CPNE1-204ENST00000397443 KRTAP5-11Q6L8G4 156 aa4.2□□□□□ -1.74
CPNE1-204ENST00000397443 KRTAP21-2Q3LI59 83 aa4.17□□□□□ -1.74
CPNE1-204ENST00000397443 KRTAP4-12Q9BQ66 201 aa4.15□□□□□ -1.75
CPNE1-204ENST00000397443 KRTAP4-4Q9BYR3 166 aa3.82□□□□□ -1.8
CPNE1-204ENST00000397443 LCE1FQ5T754 118 aa3.82□□□□□ -1.8
CPNE1-204ENST00000397443 PHGR1C9JFL3 82 aa3.62□□□□□ -1.83
CPNE1-204ENST00000397443 MUC19Q7Z5P9 8384 aa3.35□□□□□ -1.87
CPNE1-204ENST00000397443 KRTAP21-1Q3LI58 79 aa2.64□□□□□ -1.99
CPNE1-204ENST00000397443 MUC16Q8WXI7 14507 aa2.29□□□□□ -2.04
Retrieved 78 of 20,778 RNA–protein pairs in 130.2 ms