RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 KRTAP2-3P0C7H8 128 aa5.71□□□□□ -1.5
SEC13-208ENST00000397109 KRTAP2-4Q9BYR9 128 aa5.71□□□□□ -1.5
SEC13-208ENST00000397109 SPRR2DP22532 72 aa5.59□□□□□ -1.51
SEC13-208ENST00000397109 KRTAP2-2Q9BYT5 123 aa5.53□□□□□ -1.52
SEC13-208ENST00000397109 KRTAP2-1Q9BYU5 128 aa5.53□□□□□ -1.52
SEC13-208ENST00000397109 KRTAP19-7Q3SYF9 63 aa5.45□□□□□ -1.54
SEC13-208ENST00000397109 LCE3BQ5TA77 95 aa5.44□□□□□ -1.54
SEC13-208ENST00000397109 MT1EP04732 61 aa5.4□□□□□ -1.54
SEC13-208ENST00000397109 KRTAP19-3Q7Z4W3 81 aa5.37□□□□□ -1.55
SEC13-208ENST00000397109 LCE5AQ5TCM9 118 aa5.36□□□□□ -1.55
SEC13-208ENST00000397109 LCE3AQ5TA76 89 aa5.34□□□□□ -1.55
SEC13-208ENST00000397109 KRTAP19-5Q3LI72 72 aa5.33□□□□□ -1.56
SEC13-208ENST00000397109 MT1GP13640 62 aa5.26□□□□□ -1.57
SEC13-208ENST00000397109 KRTAP15-1Q3LI76 137 aa5.26□□□□□ -1.57
SEC13-208ENST00000397109 DSTQ03001 7570 aaKnown RBP5.18□□□□□ -1.58
SEC13-208ENST00000397109 KRTAP12-3P60328 96 aa5.18□□□□□ -1.58
SEC13-208ENST00000397109 MT1LQ93083 61 aa5.18□□□□□ -1.58
SEC13-208ENST00000397109 MT1MQ8N339 61 aa5.14□□□□□ -1.59
SEC13-208ENST00000397109 KRTAP19-4Q3LI73 84 aa5.07□□□□□ -1.6
SEC13-208ENST00000397109 SPRR5A0A1B0GTR4 108 aa5.06□□□□□ -1.6
SEC13-208ENST00000397109 KRTAP4-9Q9BYQ8 210 aa5□□□□□ -1.61
SEC13-208ENST00000397109 LUZP6Q538Z0 58 aa5□□□□□ -1.61
SEC13-208ENST00000397109 LCE4AQ5TA78 99 aa4.98□□□□□ -1.61
SEC13-208ENST00000397109 KRTAP4-3Q9BYR4 195 aa4.98□□□□□ -1.61
SEC13-208ENST00000397109 LCE1DQ5T752 114 aa4.92□□□□□ -1.62
SEC13-208ENST00000397109 KRTAP4-7Q9BYR0 210 aa4.89□□□□□ -1.63
SEC13-208ENST00000397109 MT4P47944 62 aa4.88□□□□□ -1.63
SEC13-208ENST00000397109 KRTAP5-4Q6L8H1 288 aa4.88□□□□□ -1.63
SEC13-208ENST00000397109 LCE3CQ5T5A8 94 aa4.87□□□□□ -1.63
SEC13-208ENST00000397109 NDUFAF8A1L188 74 aa4.86□□□□□ -1.63
SEC13-208ENST00000397109 HMCN1Q96RW7 5635 aa4.82□□□□□ -1.64
SEC13-208ENST00000397109 GPR98Q8WXG9 6306 aa4.78□□□□□ -1.64
SEC13-208ENST00000397109 KRTAP4-6Q9BYQ5 205 aa4.74□□□□□ -1.65
SEC13-208ENST00000397109 KRTAP5-5Q701N2 237 aaPredicted RBP4.7□□□□□ -1.66
SEC13-208ENST00000397109 LOC100996750A0A140TA64 210 aa4.69□□□□□ -1.66
SEC13-208ENST00000397109 AHNAK2Q8IVF2 5795 aa4.65□□□□□ -1.67
SEC13-208ENST00000397109 KRTAP12-4P60329 112 aa4.62□□□□□ -1.67
SEC13-208ENST00000397109 KRTAP20-2Q3LI61 65 aa4.59□□□□□ -1.67
SEC13-208ENST00000397109 KRTAP5-10Q6L8G5 202 aa4.54□□□□□ -1.68
SEC13-208ENST00000397109 KRTAP9-6A8MVA2 160 aa4.51□□□□□ -1.69
SEC13-208ENST00000397109 SYNE1Q8NF91 8797 aaKnown RBP4.48□□□□□ -1.69
SEC13-208ENST00000397109 H3BS24 57 aa4.48□□□□□ -1.69
SEC13-208ENST00000397109 KRTAP5-3Q6L8H2 238 aa4.46□□□□□ -1.7
SEC13-208ENST00000397109 MT1AP04731 61 aa4.43□□□□□ -1.7
SEC13-208ENST00000397109 A0A0A0MQY5 61 aa4.42□□□□□ -1.7
SEC13-208ENST00000397109 KRTAP5-7Q6L8G8 165 aa4.37□□□□□ -1.71
SEC13-208ENST00000397109 KRTAP6-1Q3LI64 71 aa4.37□□□□□ -1.71
SEC13-208ENST00000397109 KRTAP5-2Q701N4 177 aa4.28□□□□□ -1.72
SEC13-208ENST00000397109 KRTAP9-4Q9BYQ2 154 aa4.27□□□□□ -1.73
SEC13-208ENST00000397109 KRTAP4-12Q9BQ66 201 aa4.23□□□□□ -1.73
SEC13-208ENST00000397109 KRTAP4-11Q9BYQ6 195 aa4.18□□□□□ -1.74
SEC13-208ENST00000397109 KRTAP6-2Q3LI66 62 aa4.17□□□□□ -1.74
SEC13-208ENST00000397109 INE1O15225 51 aa4.16□□□□□ -1.74
SEC13-208ENST00000397109 MT3P25713 68 aa4.06□□□□□ -1.76
SEC13-208ENST00000397109 KRTAP9-9Q9BYP9 154 aa4.06□□□□□ -1.76
SEC13-208ENST00000397109 KRTAP5-8O75690 187 aa4.03□□□□□ -1.76
SEC13-208ENST00000397109 OBSCNQ5VST9 7968 aa3.94□□□□□ -1.78
SEC13-208ENST00000397109 KRTAP5-1Q6L8H4 278 aa3.82□□□□□ -1.8
SEC13-208ENST00000397109 MUC5BQ9HC84 5762 aaPredicted RBP3.82□□□□□ -1.8
SEC13-208ENST00000397109 AHNAKQ09666 5890 aaKnown RBP3.8□□□□□ -1.8
SEC13-208ENST00000397109 MUC5ACP98088 5654 aa3.77□□□□□ -1.81
SEC13-208ENST00000397109 LCE1EQ5T753 118 aa3.72□□□□□ -1.81
SEC13-208ENST00000397109 LCE3DQ9BYE3 92 aa3.69□□□□□ -1.82
SEC13-208ENST00000397109 KRTAP4-2Q9BYR5 136 aa3.67□□□□□ -1.82
SEC13-208ENST00000397109 LCE3EQ5T5B0 92 aa3.61□□□□□ -1.83
SEC13-208ENST00000397109 LCE1BQ5T7P3 118 aa3.47□□□□□ -1.85
SEC13-208ENST00000397109 LCE1CQ5T751 118 aa3.44□□□□□ -1.86
SEC13-208ENST00000397109 PRM1P04553 51 aa3.15□□□□□ -1.91
SEC13-208ENST00000397109 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.14□□□□□ -1.91
SEC13-208ENST00000397109 KRTAP5-11Q6L8G4 156 aa3.1□□□□□ -1.91
SEC13-208ENST00000397109 LCE1FQ5T754 118 aa3.03□□□□□ -1.92
SEC13-208ENST00000397109 KRTAP21-2Q3LI59 83 aa2.88□□□□□ -1.95
SEC13-208ENST00000397109 PHGR1C9JFL3 82 aa2.67□□□□□ -1.98
SEC13-208ENST00000397109 KRTAP4-4Q9BYR3 166 aa2.6□□□□□ -1.99
SEC13-208ENST00000397109 MUC19Q7Z5P9 8384 aa2.43□□□□□ -2.02
SEC13-208ENST00000397109 KRTAP21-1Q3LI58 79 aa2.03□□□□□ -2.08
SEC13-208ENST00000397109 MUC16Q8WXI7 14507 aa1.78□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 12 ms