RNA–Protein interactions for RNA: ENST00000397012.6

PPARG-206, Transcript of peroxisome proliferator activated receptor gamma, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPARG, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARG-206ENST00000397012 SPRR2FQ96RM1 72 aa4.69□□□□□ -1.66
PPARG-206ENST00000397012 KRTAP5-9P26371 169 aa4.68□□□□□ -1.66
PPARG-206ENST00000397012 SYNE2Q8WXH0 6885 aaKnown RBP4.66□□□□□ -1.66
PPARG-206ENST00000397012 KRTAP19-3Q7Z4W3 81 aa4.65□□□□□ -1.67
PPARG-206ENST00000397012 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.64□□□□□ -1.67
PPARG-206ENST00000397012 MUC12Q9UKN1 5478 aa4.62□□□□□ -1.67
PPARG-206ENST00000397012 MT1GP13640 62 aa4.62□□□□□ -1.67
PPARG-206ENST00000397012 KRTAP4-7Q9BYR0 210 aa4.6□□□□□ -1.67
PPARG-206ENST00000397012 LUZP6Q538Z0 58 aa4.58□□□□□ -1.68
PPARG-206ENST00000397012 LCE5AQ5TCM9 118 aa4.58□□□□□ -1.68
PPARG-206ENST00000397012 KRTAP6-3Q3LI67 103 aa4.56□□□□□ -1.68
PPARG-206ENST00000397012 MT1MQ8N339 61 aa4.56□□□□□ -1.68
PPARG-206ENST00000397012 LCE1AQ5T7P2 110 aa4.52□□□□□ -1.69
PPARG-206ENST00000397012 NDUFAF8A1L188 74 aa4.5□□□□□ -1.69
PPARG-206ENST00000397012 KRTAP9-6A8MVA2 160 aa4.48□□□□□ -1.69
PPARG-206ENST00000397012 KRTAP4-3Q9BYR4 195 aa4.46□□□□□ -1.69
PPARG-206ENST00000397012 SPRR2EP22531 72 aa4.44□□□□□ -1.7
PPARG-206ENST00000397012 SPRR2BP35325 72 aa4.44□□□□□ -1.7
PPARG-206ENST00000397012 SPRR2AP35326 72 aa4.44□□□□□ -1.7
PPARG-206ENST00000397012 MDN1Q9NU22 5596 aa4.43□□□□□ -1.7
PPARG-206ENST00000397012 KRTAP9-7A8MTY7 169 aa4.36□□□□□ -1.71
PPARG-206ENST00000397012 LCE4AQ5TA78 99 aa4.34□□□□□ -1.71
PPARG-206ENST00000397012 KRTAP4-12Q9BQ66 201 aa4.3□□□□□ -1.72
PPARG-206ENST00000397012 DSTQ03001 7570 aaKnown RBP4.28□□□□□ -1.72
PPARG-206ENST00000397012 SPRR2DP22532 72 aa4.28□□□□□ -1.73
PPARG-206ENST00000397012 A0A0A0MQY5 61 aa4.26□□□□□ -1.73
PPARG-206ENST00000397012 NEBP20929 6669 aa4.22□□□□□ -1.73
PPARG-206ENST00000397012 KRTAP2-3P0C7H8 128 aa4.16□□□□□ -1.74
PPARG-206ENST00000397012 KRTAP2-4Q9BYR9 128 aa4.16□□□□□ -1.74
PPARG-206ENST00000397012 KRTAP2-1Q9BYU5 128 aa4.16□□□□□ -1.74
PPARG-206ENST00000397012 KRTAP4-2Q9BYR5 136 aa4.14□□□□□ -1.75
PPARG-206ENST00000397012 KRTAP5-5Q701N2 237 aaPredicted RBP4.14□□□□□ -1.75
PPARG-206ENST00000397012 KRTAP9-9Q9BYP9 154 aa4.14□□□□□ -1.75
PPARG-206ENST00000397012 KRTAP9-4Q9BYQ2 154 aa4.14□□□□□ -1.75
PPARG-206ENST00000397012 LCE3BQ5TA77 95 aa4.12□□□□□ -1.75
PPARG-206ENST00000397012 MT1AP04731 61 aa4.04□□□□□ -1.76
PPARG-206ENST00000397012 KRTAP6-1Q3LI64 71 aa4□□□□□ -1.77
PPARG-206ENST00000397012 KRTAP5-4Q6L8H1 288 aa3.94□□□□□ -1.78
PPARG-206ENST00000397012 KRTAP4-9Q9BYQ8 210 aa3.92□□□□□ -1.78
PPARG-206ENST00000397012 KRTAP2-2Q9BYT5 123 aa3.89□□□□□ -1.79
PPARG-206ENST00000397012 SYNE1Q8NF91 8797 aaKnown RBP3.86□□□□□ -1.79
PPARG-206ENST00000397012 KRTAP20-1Q3LI63 56 aa3.86□□□□□ -1.79
PPARG-206ENST00000397012 LCE1DQ5T752 114 aa3.84□□□□□ -1.79
PPARG-206ENST00000397012 KRTAP12-4P60329 112 aa3.78□□□□□ -1.8
PPARG-206ENST00000397012 INE1O15225 51 aa3.73□□□□□ -1.81
PPARG-206ENST00000397012 MT4P47944 62 aa3.7□□□□□ -1.82
PPARG-206ENST00000397012 KRTAP6-2Q3LI66 62 aa3.67□□□□□ -1.82
PPARG-206ENST00000397012 HMCN1Q96RW7 5635 aa3.65□□□□□ -1.82
PPARG-206ENST00000397012 MT3P25713 68 aa3.65□□□□□ -1.82
PPARG-206ENST00000397012 KRTAP20-2Q3LI61 65 aa3.65□□□□□ -1.82
PPARG-206ENST00000397012 KRTAP4-11Q9BYQ6 195 aa3.63□□□□□ -1.83
PPARG-206ENST00000397012 KRTAP5-2Q701N4 177 aa3.57□□□□□ -1.84
PPARG-206ENST00000397012 LCE3DQ9BYE3 92 aa3.54□□□□□ -1.84
PPARG-206ENST00000397012 LCE3EQ5T5B0 92 aa3.44□□□□□ -1.86
PPARG-206ENST00000397012 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.36□□□□□ -1.87
PPARG-206ENST00000397012 OBSCNQ5VST9 7968 aa3.36□□□□□ -1.87
PPARG-206ENST00000397012 LCE1EQ5T753 118 aa3.19□□□□□ -1.9
PPARG-206ENST00000397012 AHNAK2Q8IVF2 5795 aa3.13□□□□□ -1.91
PPARG-206ENST00000397012 KRTAP5-1Q6L8H4 278 aa3.08□□□□□ -1.92
PPARG-206ENST00000397012 LCE1FQ5T754 118 aa3.05□□□□□ -1.92
PPARG-206ENST00000397012 KRTAP5-8O75690 187 aa3.04□□□□□ -1.92
PPARG-206ENST00000397012 KRTAP5-10Q6L8G5 202 aa3.02□□□□□ -1.93
PPARG-206ENST00000397012 PRM1P04553 51 aa3.01□□□□□ -1.93
PPARG-206ENST00000397012 KRTAP5-7Q6L8G8 165 aa2.98□□□□□ -1.93
PPARG-206ENST00000397012 LCE1CQ5T751 118 aa2.97□□□□□ -1.93
PPARG-206ENST00000397012 LCE1BQ5T7P3 118 aa2.97□□□□□ -1.93
PPARG-206ENST00000397012 MUC5ACP98088 5654 aa2.92□□□□□ -1.94
PPARG-206ENST00000397012 GPR98Q8WXG9 6306 aa2.77□□□□□ -1.97
PPARG-206ENST00000397012 KRTAP4-4Q9BYR3 166 aa2.66□□□□□ -1.98
PPARG-206ENST00000397012 KRTAP21-2Q3LI59 83 aa2.64□□□□□ -1.99
PPARG-206ENST00000397012 KRTAP5-11Q6L8G4 156 aa2.61□□□□□ -1.99
PPARG-206ENST00000397012 MUC5BQ9HC84 5762 aaPredicted RBP2.53□□□□□ -2
PPARG-206ENST00000397012 AHNAKQ09666 5890 aaKnown RBP2.32□□□□□ -2.04
PPARG-206ENST00000397012 PHGR1C9JFL3 82 aa2.25□□□□□ -2.05
PPARG-206ENST00000397012 MUC19Q7Z5P9 8384 aa1.98□□□□□ -2.09
PPARG-206ENST00000397012 KRTAP21-1Q3LI58 79 aa1.88□□□□□ -2.11
PPARG-206ENST00000397012 MUC16Q8WXI7 14507 aa1.46□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 43 ms