RNA–Protein interactions for RNA: ENST00000396356.7

SOX6-202, Transcript of SRY-box 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SOX6, Length 8,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-202ENST00000396356 HYDINQ4G0P3 5121 aa2.23□□□□□ -2.05
SOX6-202ENST00000396356 LCE1DQ5T752 114 aa2.22□□□□□ -2.05
SOX6-202ENST00000396356 MUC17Q685J3 4493 aa2.21□□□□□ -2.06
SOX6-202ENST00000396356 KRTAP17-1Q9BYP8 105 aa2.2□□□□□ -2.06
SOX6-202ENST00000396356 LCE5AQ5TCM9 118 aa2.2□□□□□ -2.06
SOX6-202ENST00000396356 KMT2CQ8NEZ4 4911 aaKnown RBP2.19□□□□□ -2.06
SOX6-202ENST00000396356 LCE2AQ5TA79 106 aaPredicted RBP2.18□□□□□ -2.06
SOX6-202ENST00000396356 KRTAP20-1Q3LI63 56 aa2.18□□□□□ -2.06
SOX6-202ENST00000396356 KRTAP9-4Q9BYQ2 154 aa2.17□□□□□ -2.06
SOX6-202ENST00000396356 LCE1BQ5T7P3 118 aa2.16□□□□□ -2.06
SOX6-202ENST00000396356 EPPK1P58107 5090 aaKnown RBP2.16□□□□□ -2.06
SOX6-202ENST00000396356 MT4P47944 62 aa2.16□□□□□ -2.06
SOX6-202ENST00000396356 KRTAP9-2Q9BYQ4 174 aa2.15□□□□□ -2.07
SOX6-202ENST00000396356 HMCN2Q8NDA2 5059 aa2.14□□□□□ -2.07
SOX6-202ENST00000396356 KRTAP6-2Q3LI66 62 aa2.09□□□□□ -2.08
SOX6-202ENST00000396356 KRTAP4-7Q9BYR0 210 aa2.09□□□□□ -2.08
SOX6-202ENST00000396356 KRTAP2-2Q9BYT5 123 aa2.08□□□□□ -2.08
SOX6-202ENST00000396356 KRTAP9-6A0A140TA67 174 aa2.08□□□□□ -2.08
SOX6-202ENST00000396356 KIAA1109Q2LD37 5005 aa2.06□□□□□ -2.08
SOX6-202ENST00000396356 RNF213Q63HN8 5207 aa2.04□□□□□ -2.08
SOX6-202ENST00000396356 LPAP08519 4548 aa2.02□□□□□ -2.09
SOX6-202ENST00000396356 KRTAP6-1Q3LI64 71 aa2.01□□□□□ -2.09
SOX6-202ENST00000396356 LOC100996750A0A140TA64 210 aa2.01□□□□□ -2.09
SOX6-202ENST00000396356 SYNE1Q8NF91 8797 aaKnown RBP1.98□□□□□ -2.09
SOX6-202ENST00000396356 KRTAP9-7A8MTY7 169 aa1.97□□□□□ -2.09
SOX6-202ENST00000396356 KRTAP9-9Q9BYP9 154 aa1.97□□□□□ -2.09
SOX6-202ENST00000396356 UBR4Q5T4S7 5183 aa1.95□□□□□ -2.1
SOX6-202ENST00000396356 KRTAP5-9P26371 169 aa1.93□□□□□ -2.1
SOX6-202ENST00000396356 ABCA13Q86UQ4 5058 aa1.93□□□□□ -2.1
SOX6-202ENST00000396356 KRTAP4-3Q9BYR4 195 aa1.92□□□□□ -2.1
SOX6-202ENST00000396356 KRTAP9-6A8MVA2 160 aa1.91□□□□□ -2.1
SOX6-202ENST00000396356 LCE1CQ5T751 118 aa1.91□□□□□ -2.1
SOX6-202ENST00000396356 LCE1EQ5T753 118 aa1.91□□□□□ -2.1
SOX6-202ENST00000396356 LCE1FQ5T754 118 aa1.91□□□□□ -2.1
SOX6-202ENST00000396356 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.9□□□□□ -2.11
SOX6-202ENST00000396356 MDN1Q9NU22 5596 aa1.84□□□□□ -2.12
SOX6-202ENST00000396356 MUC12Q9UKN1 5478 aa1.83□□□□□ -2.12
SOX6-202ENST00000396356 FAT4Q6V0I7 4981 aa1.81□□□□□ -2.12
SOX6-202ENST00000396356 KRTAP4-9Q9BYQ8 210 aa1.81□□□□□ -2.12
SOX6-202ENST00000396356 SYNE2Q8WXH0 6885 aaKnown RBP1.8□□□□□ -2.12
SOX6-202ENST00000396356 KRTAP5-4Q6L8H1 288 aa1.75□□□□□ -2.13
SOX6-202ENST00000396356 NEBP20929 6669 aa1.75□□□□□ -2.13
SOX6-202ENST00000396356 MUC2Q02817 5179 aa1.73□□□□□ -2.13
SOX6-202ENST00000396356 KRTAP20-2Q3LI61 65 aa1.71□□□□□ -2.14
SOX6-202ENST00000396356 GPR98Q8WXG9 6306 aa1.7□□□□□ -2.14
SOX6-202ENST00000396356 KMT2DO14686 5537 aa1.68□□□□□ -2.14
SOX6-202ENST00000396356 FSIP2Q5CZC0 6907 aa1.67□□□□□ -2.14
SOX6-202ENST00000396356 AHNAK2Q8IVF2 5795 aa1.67□□□□□ -2.14
SOX6-202ENST00000396356 SSPOA2VEC9 5147 aa1.62□□□□□ -2.15
SOX6-202ENST00000396356 FCGBPQ9Y6R7 5405 aaPredicted RBP1.62□□□□□ -2.15
SOX6-202ENST00000396356 MUC5ACP98088 5654 aa1.61□□□□□ -2.15
SOX6-202ENST00000396356 USH2AO75445 5202 aa1.6□□□□□ -2.15
SOX6-202ENST00000396356 KRTAP4-11Q9BYQ6 195 aa1.58□□□□□ -2.16
SOX6-202ENST00000396356 KRTAP5-5Q701N2 237 aaPredicted RBP1.55□□□□□ -2.16
SOX6-202ENST00000396356 KRTAP5-3Q6L8H2 238 aa1.55□□□□□ -2.16
SOX6-202ENST00000396356 HMCN1Q96RW7 5635 aa1.5□□□□□ -2.17
SOX6-202ENST00000396356 KRTAP4-6Q9BYQ5 205 aa1.48□□□□□ -2.17
SOX6-202ENST00000396356 OBSCNQ5VST9 7968 aa1.47□□□□□ -2.17
SOX6-202ENST00000396356 AHNAKQ09666 5890 aaKnown RBP1.44□□□□□ -2.18
SOX6-202ENST00000396356 MACF1Q9UPN3 7388 aaKnown RBP1.43□□□□□ -2.18
SOX6-202ENST00000396356 MUC5BQ9HC84 5762 aaPredicted RBP1.41□□□□□ -2.18
SOX6-202ENST00000396356 KRTAP5-2Q701N4 177 aa1.34□□□□□ -2.19
SOX6-202ENST00000396356 KRTAP5-11Q6L8G4 156 aa1.33□□□□□ -2.2
SOX6-202ENST00000396356 KRTAP5-10Q6L8G5 202 aa1.32□□□□□ -2.2
SOX6-202ENST00000396356 MUC19Q7Z5P9 8384 aa1.31□□□□□ -2.2
SOX6-202ENST00000396356 DSTQ03001 7570 aaKnown RBP1.3□□□□□ -2.2
SOX6-202ENST00000396356 KRTAP5-8O75690 187 aa1.3□□□□□ -2.2
SOX6-202ENST00000396356 KRTAP4-4Q9BYR3 166 aa1.26□□□□□ -2.21
SOX6-202ENST00000396356 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.26□□□□□ -2.21
SOX6-202ENST00000396356 KRTAP4-12Q9BQ66 201 aa1.24□□□□□ -2.21
SOX6-202ENST00000396356 KRTAP4-2Q9BYR5 136 aa1.24□□□□□ -2.21
SOX6-202ENST00000396356 PHGR1C9JFL3 82 aa1.11□□□□□ -2.23
SOX6-202ENST00000396356 KRTAP21-1Q3LI58 79 aa1.1□□□□□ -2.23
SOX6-202ENST00000396356 KRTAP5-1Q6L8H4 278 aa1.1□□□□□ -2.23
SOX6-202ENST00000396356 KRTAP21-2Q3LI59 83 aa1.07□□□□□ -2.24
SOX6-202ENST00000396356 KRTAP5-7Q6L8G8 165 aa1.05□□□□□ -2.24
SOX6-202ENST00000396356 MUC16Q8WXI7 14507 aa0.67□□□□□ -2.3
Retrieved 77 of 20,778 RNA–protein pairs in 60.5 ms