RNA–Protein interactions for RNA: ENST00000395853.5

MSH5-205, Transcript of mutS homolog 5, humanhuman

TSL 2 BASIC

Gene MSH5, Length 2,704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-205ENST00000395853 KRTAP8-1Q8IUC2 63 aa3.39□□□□□ -1.87
MSH5-205ENST00000395853 KRTAP19-8Q3LI54 63 aa3.35□□□□□ -1.87
MSH5-205ENST00000395853 KRTAP5-9P26371 169 aa3.35□□□□□ -1.87
MSH5-205ENST00000395853 LCE5AQ5TCM9 118 aa3.35□□□□□ -1.87
MSH5-205ENST00000395853 MT1BP07438 61 aa3.34□□□□□ -1.87
MSH5-205ENST00000395853 KRTAP2-3P0C7H8 128 aa3.32□□□□□ -1.88
MSH5-205ENST00000395853 KRTAP2-4Q9BYR9 128 aa3.32□□□□□ -1.88
MSH5-205ENST00000395853 MUC12Q9UKN1 5478 aa3.32□□□□□ -1.88
MSH5-205ENST00000395853 KRTAP12-3P60328 96 aa3.29□□□□□ -1.88
MSH5-205ENST00000395853 KRTAP10-5P60370 271 aa3.28□□□□□ -1.89
MSH5-205ENST00000395853 MT1XP80297 61 aa3.28□□□□□ -1.89
MSH5-205ENST00000395853 KRTAP4-8A0A0G2JLE6 195 aa3.23□□□□□ -1.89
MSH5-205ENST00000395853 KRTAP2-1Q9BYU5 128 aa3.23□□□□□ -1.89
MSH5-205ENST00000395853 LCE1DQ5T752 114 aa3.22□□□□□ -1.89
MSH5-205ENST00000395853 KRTAP2-2Q9BYT5 123 aa3.2□□□□□ -1.9
MSH5-205ENST00000395853 KMT2DO14686 5537 aa3.19□□□□□ -1.9
MSH5-205ENST00000395853 KRTAP10-7P60409 375 aaPredicted RBP3.18□□□□□ -1.9
MSH5-205ENST00000395853 MDN1Q9NU22 5596 aa3.17□□□□□ -1.9
MSH5-205ENST00000395853 SPRR2EP22531 72 aa3.16□□□□□ -1.9
MSH5-205ENST00000395853 SPRR2BP35325 72 aa3.16□□□□□ -1.9
MSH5-205ENST00000395853 SPRR2AP35326 72 aa3.16□□□□□ -1.9
MSH5-205ENST00000395853 SPRR2FQ96RM1 72 aa3.13□□□□□ -1.91
MSH5-205ENST00000395853 LCE3CQ5T5A8 94 aa3.13□□□□□ -1.91
MSH5-205ENST00000395853 LCE1AQ5T7P2 110 aa3.09□□□□□ -1.91
MSH5-205ENST00000395853 KRTAP4-7Q9BYR0 210 aa3.09□□□□□ -1.92
MSH5-205ENST00000395853 KRTAP4-9Q9BYQ8 210 aa3.08□□□□□ -1.92
MSH5-205ENST00000395853 KRTAP9-6A8MVA2 160 aa3.06□□□□□ -1.92
MSH5-205ENST00000395853 SPRR2DP22532 72 aa3.06□□□□□ -1.92
MSH5-205ENST00000395853 KRTAP12-4P60329 112 aa3.05□□□□□ -1.92
MSH5-205ENST00000395853 KRTAP4-11Q9BYQ6 195 aa3.05□□□□□ -1.92
MSH5-205ENST00000395853 KRTAP19-5Q3LI72 72 aa3.01□□□□□ -1.93
MSH5-205ENST00000395853 KRTAP4-2Q9BYR5 136 aa2.98□□□□□ -1.93
MSH5-205ENST00000395853 GPR98Q8WXG9 6306 aa2.95□□□□□ -1.94
MSH5-205ENST00000395853 KRTAP19-7Q3SYF9 63 aa2.92□□□□□ -1.94
MSH5-205ENST00000395853 LCE1EQ5T753 118 aa2.9□□□□□ -1.95
MSH5-205ENST00000395853 LCE1FQ5T754 118 aa2.89□□□□□ -1.95
MSH5-205ENST00000395853 MT1EP04732 61 aa2.84□□□□□ -1.95
MSH5-205ENST00000395853 MT1LQ93083 61 aa2.82□□□□□ -1.96
MSH5-205ENST00000395853 PRM1P04553 51 aa2.77□□□□□ -1.97
MSH5-205ENST00000395853 DSTQ03001 7570 aaKnown RBP2.75□□□□□ -1.97
MSH5-205ENST00000395853 MT3P25713 68 aa2.73□□□□□ -1.97
MSH5-205ENST00000395853 KRTAP5-10Q6L8G5 202 aa2.72□□□□□ -1.97
MSH5-205ENST00000395853 KRTAP19-3Q7Z4W3 81 aa2.72□□□□□ -1.97
MSH5-205ENST00000395853 KRTAP4-3Q9BYR4 195 aa2.71□□□□□ -1.98
MSH5-205ENST00000395853 KRTAP5-7Q6L8G8 165 aa2.68□□□□□ -1.98
MSH5-205ENST00000395853 MT1MQ8N339 61 aa2.67□□□□□ -1.98
MSH5-205ENST00000395853 HMCN1Q96RW7 5635 aa2.66□□□□□ -1.98
MSH5-205ENST00000395853 MT4P47944 62 aa2.66□□□□□ -1.98
MSH5-205ENST00000395853 AHNAK2Q8IVF2 5795 aa2.66□□□□□ -1.98
MSH5-205ENST00000395853 MT1GP13640 62 aa2.66□□□□□ -1.98
MSH5-205ENST00000395853 SYNE1Q8NF91 8797 aaKnown RBP2.65□□□□□ -1.99
MSH5-205ENST00000395853 KRTAP5-4Q6L8H1 288 aa2.63□□□□□ -1.99
MSH5-205ENST00000395853 KRTAP5-5Q701N2 237 aaPredicted RBP2.63□□□□□ -1.99
MSH5-205ENST00000395853 KRTAP5-3Q6L8H2 238 aa2.59□□□□□ -2
MSH5-205ENST00000395853 LCE3EQ5T5B0 92 aa2.57□□□□□ -2
MSH5-205ENST00000395853 LCE3DQ9BYE3 92 aa2.54□□□□□ -2
MSH5-205ENST00000395853 MT1AP04731 61 aa2.53□□□□□ -2
MSH5-205ENST00000395853 MUC5BQ9HC84 5762 aaPredicted RBP2.5□□□□□ -2.01
MSH5-205ENST00000395853 KRTAP20-2Q3LI61 65 aa2.48□□□□□ -2.01
MSH5-205ENST00000395853 OBSCNQ5VST9 7968 aa2.47□□□□□ -2.01
MSH5-205ENST00000395853 KRTAP6-2Q3LI66 62 aa2.45□□□□□ -2.02
MSH5-205ENST00000395853 KRTAP6-1Q3LI64 71 aa2.4□□□□□ -2.03
MSH5-205ENST00000395853 AHNAKQ09666 5890 aaKnown RBP2.37□□□□□ -2.03
MSH5-205ENST00000395853 KRTAP5-2Q701N4 177 aa2.26□□□□□ -2.05
MSH5-205ENST00000395853 KRTAP5-8O75690 187 aa2.26□□□□□ -2.05
MSH5-205ENST00000395853 MUC5ACP98088 5654 aa2.25□□□□□ -2.05
MSH5-205ENST00000395853 KRTAP5-11Q6L8G4 156 aa2.09□□□□□ -2.07
MSH5-205ENST00000395853 MUC19Q7Z5P9 8384 aa2.07□□□□□ -2.08
MSH5-205ENST00000395853 KRTAP5-1Q6L8H4 278 aa2.06□□□□□ -2.08
MSH5-205ENST00000395853 LCE1CQ5T751 118 aa1.92□□□□□ -2.1
MSH5-205ENST00000395853 LCE1BQ5T7P3 118 aa1.92□□□□□ -2.1
MSH5-205ENST00000395853 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.85□□□□□ -2.11
MSH5-205ENST00000395853 KRTAP21-1Q3LI58 79 aa1.82□□□□□ -2.12
MSH5-205ENST00000395853 KRTAP4-4Q9BYR3 166 aa1.6□□□□□ -2.15
MSH5-205ENST00000395853 PHGR1C9JFL3 82 aa1.58□□□□□ -2.16
MSH5-205ENST00000395853 KRTAP21-2Q3LI59 83 aa1.55□□□□□ -2.16
MSH5-205ENST00000395853 MUC16Q8WXI7 14507 aa0.96□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 120.7 ms