RNA–Protein interactions for RNA: ENST00000395812.6

CAST-206, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAST, Length 4,506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-206ENST00000395812 TNXBP22105 4242 aa4.5□□□□□ -1.69
CAST-206ENST00000395812 KRTAP19-3Q7Z4W3 81 aa4.48□□□□□ -1.69
CAST-206ENST00000395812 FLGP20930 4061 aaPredicted RBP4.46□□□□□ -1.69
CAST-206ENST00000395812 LCE3BQ5TA77 95 aa4.35□□□□□ -1.71
CAST-206ENST00000395812 MT1EP04732 61 aa4.34□□□□□ -1.71
CAST-206ENST00000395812 SYNE2Q8WXH0 6885 aaKnown RBP4.34□□□□□ -1.71
CAST-206ENST00000395812 KRTAP20-1Q3LI63 56 aa4.33□□□□□ -1.72
CAST-206ENST00000395812 KRTAP6-3Q3LI67 103 aa4.32□□□□□ -1.72
CAST-206ENST00000395812 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.31□□□□□ -1.72
CAST-206ENST00000395812 MT1LQ93083 61 aa4.3□□□□□ -1.72
CAST-206ENST00000395812 USH2AO75445 5202 aa4.27□□□□□ -1.73
CAST-206ENST00000395812 MT4P47944 62 aa4.25□□□□□ -1.73
CAST-206ENST00000395812 MT1MQ8N339 61 aa4.22□□□□□ -1.73
CAST-206ENST00000395812 KRTAP2-3P0C7H8 128 aa4.18□□□□□ -1.74
CAST-206ENST00000395812 KRTAP2-4Q9BYR9 128 aa4.18□□□□□ -1.74
CAST-206ENST00000395812 DSTQ03001 7570 aaKnown RBP4.17□□□□□ -1.74
CAST-206ENST00000395812 LCE1AQ5T7P2 110 aa4.16□□□□□ -1.74
CAST-206ENST00000395812 KRTAP4-7Q9BYR0 210 aa4.13□□□□□ -1.75
CAST-206ENST00000395812 KMT2DO14686 5537 aa4.12□□□□□ -1.75
CAST-206ENST00000395812 FCGBPQ9Y6R7 5405 aaPredicted RBP4.06□□□□□ -1.76
CAST-206ENST00000395812 MT3P25713 68 aa4.06□□□□□ -1.76
CAST-206ENST00000395812 KRTAP2-2Q9BYT5 123 aa4.05□□□□□ -1.76
CAST-206ENST00000395812 KRTAP2-1Q9BYU5 128 aa4.05□□□□□ -1.76
CAST-206ENST00000395812 KRTAP19-7Q3SYF9 63 aa4.04□□□□□ -1.76
CAST-206ENST00000395812 LCE3DQ9BYE3 92 aa4.03□□□□□ -1.76
CAST-206ENST00000395812 SPRR5A0A1B0GTR4 108 aa4.03□□□□□ -1.76
CAST-206ENST00000395812 MACF1Q9UPN3 7388 aaKnown RBP3.99□□□□□ -1.77
CAST-206ENST00000395812 KRTAP4-3Q9BYR4 195 aa3.98□□□□□ -1.77
CAST-206ENST00000395812 LCE3EQ5T5B0 92 aa3.93□□□□□ -1.78
CAST-206ENST00000395812 LCE4AQ5TA78 99 aa3.9□□□□□ -1.79
CAST-206ENST00000395812 LOC100996750A0A140TA64 210 aa3.88□□□□□ -1.79
CAST-206ENST00000395812 MT1AP04731 61 aa3.87□□□□□ -1.79
CAST-206ENST00000395812 LCE1DQ5T752 114 aa3.84□□□□□ -1.8
CAST-206ENST00000395812 LCE5AQ5TCM9 118 aa3.84□□□□□ -1.8
CAST-206ENST00000395812 KRTAP4-9Q9BYQ8 210 aa3.82□□□□□ -1.8
CAST-206ENST00000395812 LCE1BQ5T7P3 118 aa3.81□□□□□ -1.8
CAST-206ENST00000395812 MUC12Q9UKN1 5478 aa3.78□□□□□ -1.8
CAST-206ENST00000395812 GPR98Q8WXG9 6306 aa3.75□□□□□ -1.81
CAST-206ENST00000395812 NEBP20929 6669 aa3.75□□□□□ -1.81
CAST-206ENST00000395812 MDN1Q9NU22 5596 aa3.69□□□□□ -1.82
CAST-206ENST00000395812 KRTAP5-9P26371 169 aa3.69□□□□□ -1.82
CAST-206ENST00000395812 SSPOA2VEC9 5147 aa3.68□□□□□ -1.82
CAST-206ENST00000395812 KRTAP6-2Q3LI66 62 aa3.58□□□□□ -1.84
CAST-206ENST00000395812 KRTAP6-1Q3LI64 71 aa3.57□□□□□ -1.84
CAST-206ENST00000395812 KRTAP9-4Q9BYQ2 154 aa3.56□□□□□ -1.84
CAST-206ENST00000395812 KRTAP9-6A8MVA2 160 aa3.56□□□□□ -1.84
CAST-206ENST00000395812 KRTAP9-9Q9BYP9 154 aa3.38□□□□□ -1.87
CAST-206ENST00000395812 PRM1P04553 51 aa3.35□□□□□ -1.87
CAST-206ENST00000395812 KRTAP4-6Q9BYQ5 205 aa3.29□□□□□ -1.88
CAST-206ENST00000395812 LCE1CQ5T751 118 aa3.27□□□□□ -1.89
CAST-206ENST00000395812 LCE1EQ5T753 118 aa3.27□□□□□ -1.89
CAST-206ENST00000395812 LCE1FQ5T754 118 aa3.27□□□□□ -1.89
CAST-206ENST00000395812 KRTAP20-2Q3LI61 65 aa3.26□□□□□ -1.89
CAST-206ENST00000395812 MUC19Q7Z5P9 8384 aa3.25□□□□□ -1.89
CAST-206ENST00000395812 KRTAP5-4Q6L8H1 288 aa3.09□□□□□ -1.91
CAST-206ENST00000395812 KRTAP4-11Q9BYQ6 195 aa3.02□□□□□ -1.93
CAST-206ENST00000395812 AHNAK2Q8IVF2 5795 aa2.97□□□□□ -1.93
CAST-206ENST00000395812 KRTAP5-3Q6L8H2 238 aa2.93□□□□□ -1.94
CAST-206ENST00000395812 MUC5ACP98088 5654 aa2.82□□□□□ -1.96
CAST-206ENST00000395812 KRTAP5-5Q701N2 237 aaPredicted RBP2.81□□□□□ -1.96
CAST-206ENST00000395812 HMCN1Q96RW7 5635 aa2.79□□□□□ -1.96
CAST-206ENST00000395812 KRTAP4-12Q9BQ66 201 aa2.74□□□□□ -1.97
CAST-206ENST00000395812 KRTAP4-2Q9BYR5 136 aa2.74□□□□□ -1.97
CAST-206ENST00000395812 KRTAP5-8O75690 187 aa2.6□□□□□ -1.99
CAST-206ENST00000395812 KRTAP4-4Q9BYR3 166 aa2.58□□□□□ -2
CAST-206ENST00000395812 KRTAP5-2Q701N4 177 aa2.44□□□□□ -2.02
CAST-206ENST00000395812 AHNAKQ09666 5890 aaKnown RBP2.44□□□□□ -2.02
CAST-206ENST00000395812 MUC5BQ9HC84 5762 aaPredicted RBP2.3□□□□□ -2.04
CAST-206ENST00000395812 KRTAP5-10Q6L8G5 202 aa2.27□□□□□ -2.05
CAST-206ENST00000395812 PHGR1C9JFL3 82 aa2.26□□□□□ -2.05
CAST-206ENST00000395812 KRTAP5-7Q6L8G8 165 aa2.24□□□□□ -2.05
CAST-206ENST00000395812 KRTAP5-1Q6L8H4 278 aa2.18□□□□□ -2.06
CAST-206ENST00000395812 KRTAP5-11Q6L8G4 156 aa2.15□□□□□ -2.07
CAST-206ENST00000395812 KRTAP21-2Q3LI59 83 aa1.89□□□□□ -2.11
CAST-206ENST00000395812 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.88□□□□□ -2.11
CAST-206ENST00000395812 KRTAP21-1Q3LI58 79 aa1.63□□□□□ -2.15
CAST-206ENST00000395812 MUC16Q8WXI7 14507 aa1.32□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 61 ms