RNA–Protein interactions for RNA: ENST00000394947.7

SIN3A-202, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 6,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-202ENST00000394947 LCE1AQ5T7P2 110 aa3.57□□□□□ -1.84
SIN3A-202ENST00000394947 KRTAP19-6Q3LI70 58 aa3.55□□□□□ -1.84
SIN3A-202ENST00000394947 KMT2CQ8NEZ4 4911 aaKnown RBP3.55□□□□□ -1.84
SIN3A-202ENST00000394947 KRTAP9-2Q9BYQ4 174 aa3.54□□□□□ -1.84
SIN3A-202ENST00000394947 RYR2Q92736 4967 aa3.52□□□□□ -1.85
SIN3A-202ENST00000394947 KIAA1109Q2LD37 5005 aa3.49□□□□□ -1.85
SIN3A-202ENST00000394947 KRTAP2-3P0C7H8 128 aa3.41□□□□□ -1.86
SIN3A-202ENST00000394947 KRTAP2-4Q9BYR9 128 aa3.41□□□□□ -1.86
SIN3A-202ENST00000394947 KRTAP2-1Q9BYU5 128 aa3.41□□□□□ -1.86
SIN3A-202ENST00000394947 KRTAP6-2Q3LI66 62 aa3.41□□□□□ -1.86
SIN3A-202ENST00000394947 LCE4AQ5TA78 99 aa3.4□□□□□ -1.87
SIN3A-202ENST00000394947 KRTAP20-1Q3LI63 56 aa3.38□□□□□ -1.87
SIN3A-202ENST00000394947 KRTAP19-2Q3LHN2 52 aa3.36□□□□□ -1.87
SIN3A-202ENST00000394947 MT1AP04731 61 aa3.33□□□□□ -1.88
SIN3A-202ENST00000394947 MUC17Q685J3 4493 aa3.32□□□□□ -1.88
SIN3A-202ENST00000394947 KRTAP9-7A8MTY7 169 aa3.31□□□□□ -1.88
SIN3A-202ENST00000394947 HERC2O95714 4834 aa3.3□□□□□ -1.88
SIN3A-202ENST00000394947 KRTAP9-6A0A140TA67 174 aa3.3□□□□□ -1.88
SIN3A-202ENST00000394947 KRTAP6-1Q3LI64 71 aa3.3□□□□□ -1.88
SIN3A-202ENST00000394947 KRTAP19-7Q3SYF9 63 aa3.24□□□□□ -1.89
SIN3A-202ENST00000394947 HERC1Q15751 4861 aa3.23□□□□□ -1.89
SIN3A-202ENST00000394947 KRTAP9-4Q9BYQ2 154 aa3.16□□□□□ -1.9
SIN3A-202ENST00000394947 FSIP2Q5CZC0 6907 aa3.14□□□□□ -1.91
SIN3A-202ENST00000394947 EPPK1P58107 5090 aaKnown RBP3.13□□□□□ -1.91
SIN3A-202ENST00000394947 ABCA13Q86UQ4 5058 aa3.11□□□□□ -1.91
SIN3A-202ENST00000394947 HMCN2Q8NDA2 5059 aa3.1□□□□□ -1.91
SIN3A-202ENST00000394947 KRTAP9-6A8MVA2 160 aa3.09□□□□□ -1.91
SIN3A-202ENST00000394947 PCLOQ9Y6V0 5065 aa3.07□□□□□ -1.92
SIN3A-202ENST00000394947 LCE2AQ5TA79 106 aaPredicted RBP3.07□□□□□ -1.92
SIN3A-202ENST00000394947 KRTAP2-2Q9BYT5 123 aa3.06□□□□□ -1.92
SIN3A-202ENST00000394947 BIRC6Q9NR09 4857 aa3.06□□□□□ -1.92
SIN3A-202ENST00000394947 KRTAP4-11Q9BYQ6 195 aa3.04□□□□□ -1.92
SIN3A-202ENST00000394947 MUC2Q02817 5179 aa3.01□□□□□ -1.93
SIN3A-202ENST00000394947 KRTAP20-2Q3LI61 65 aa2.98□□□□□ -1.93
SIN3A-202ENST00000394947 FAT4Q6V0I7 4981 aa2.96□□□□□ -1.94
SIN3A-202ENST00000394947 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.94□□□□□ -1.94
SIN3A-202ENST00000394947 KRTAP9-9Q9BYP9 154 aa2.93□□□□□ -1.94
SIN3A-202ENST00000394947 KRTAP4-4Q9BYR3 166 aa2.92□□□□□ -1.94
SIN3A-202ENST00000394947 KRTAP6-3Q3LI67 103 aa2.91□□□□□ -1.94
SIN3A-202ENST00000394947 SYNE1Q8NF91 8797 aaKnown RBP2.9□□□□□ -1.94
SIN3A-202ENST00000394947 OBSCNQ5VST9 7968 aa2.89□□□□□ -1.95
SIN3A-202ENST00000394947 UBR4Q5T4S7 5183 aa2.88□□□□□ -1.95
SIN3A-202ENST00000394947 RNF213Q63HN8 5207 aa2.86□□□□□ -1.95
SIN3A-202ENST00000394947 KRTAP4-6Q9BYQ5 205 aa2.85□□□□□ -1.95
SIN3A-202ENST00000394947 KRTAP4-12Q9BQ66 201 aa2.82□□□□□ -1.96
SIN3A-202ENST00000394947 KRTAP4-2Q9BYR5 136 aa2.82□□□□□ -1.96
SIN3A-202ENST00000394947 KMT2DO14686 5537 aa2.79□□□□□ -1.96
SIN3A-202ENST00000394947 DSTQ03001 7570 aaKnown RBP2.66□□□□□ -1.98
SIN3A-202ENST00000394947 FCGBPQ9Y6R7 5405 aaPredicted RBP2.56□□□□□ -2
SIN3A-202ENST00000394947 USH2AO75445 5202 aa2.54□□□□□ -2
SIN3A-202ENST00000394947 MACF1Q9UPN3 7388 aaKnown RBP2.49□□□□□ -2.01
SIN3A-202ENST00000394947 SSPOA2VEC9 5147 aa2.46□□□□□ -2.02
SIN3A-202ENST00000394947 MUC19Q7Z5P9 8384 aa2.32□□□□□ -2.04
SIN3A-202ENST00000394947 MUC12Q9UKN1 5478 aa2.32□□□□□ -2.04
SIN3A-202ENST00000394947 KRTAP5-5Q701N2 237 aaPredicted RBP2.31□□□□□ -2.04
SIN3A-202ENST00000394947 NEBP20929 6669 aa2.31□□□□□ -2.04
SIN3A-202ENST00000394947 KRTAP5-9P26371 169 aa2.18□□□□□ -2.06
SIN3A-202ENST00000394947 KRTAP5-4Q6L8H1 288 aa2.17□□□□□ -2.06
SIN3A-202ENST00000394947 GPR98Q8WXG9 6306 aa2.12□□□□□ -2.07
SIN3A-202ENST00000394947 PHGR1C9JFL3 82 aa2.01□□□□□ -2.09
SIN3A-202ENST00000394947 MDN1Q9NU22 5596 aa1.95□□□□□ -2.1
SIN3A-202ENST00000394947 KRTAP5-3Q6L8H2 238 aa1.9□□□□□ -2.11
SIN3A-202ENST00000394947 KRTAP5-2Q701N4 177 aa1.86□□□□□ -2.11
SIN3A-202ENST00000394947 KRTAP5-8O75690 187 aa1.85□□□□□ -2.11
SIN3A-202ENST00000394947 MUC5ACP98088 5654 aa1.83□□□□□ -2.12
SIN3A-202ENST00000394947 KRTAP5-10Q6L8G5 202 aa1.73□□□□□ -2.13
SIN3A-202ENST00000394947 HMCN1Q96RW7 5635 aa1.69□□□□□ -2.14
SIN3A-202ENST00000394947 KRTAP5-1Q6L8H4 278 aa1.63□□□□□ -2.15
SIN3A-202ENST00000394947 KRTAP21-1Q3LI58 79 aa1.49□□□□□ -2.17
SIN3A-202ENST00000394947 MUC5BQ9HC84 5762 aaPredicted RBP1.47□□□□□ -2.17
SIN3A-202ENST00000394947 AHNAK2Q8IVF2 5795 aa1.47□□□□□ -2.17
SIN3A-202ENST00000394947 KRTAP21-2Q3LI59 83 aa1.44□□□□□ -2.18
SIN3A-202ENST00000394947 AHNAKQ09666 5890 aaKnown RBP1.39□□□□□ -2.19
SIN3A-202ENST00000394947 KRTAP5-11Q6L8G4 156 aa1.37□□□□□ -2.19
SIN3A-202ENST00000394947 KRTAP5-7Q6L8G8 165 aa1.3□□□□□ -2.2
SIN3A-202ENST00000394947 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.28□□□□□ -2.21
SIN3A-202ENST00000394947 MUC16Q8WXI7 14507 aa1.19□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 167.4 ms