RNA–Protein interactions for RNA: ENST00000394853.8

PPP3CA-202, Transcript of protein phosphatase 3 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP3CA, Length 3,604 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CA-202ENST00000394853 KRTAP4-7Q9BYR0 210 aa5□□□□□ -1.61
PPP3CA-202ENST00000394853 SPRR2EP22531 72 aa4.99□□□□□ -1.61
PPP3CA-202ENST00000394853 SPRR2BP35325 72 aa4.99□□□□□ -1.61
PPP3CA-202ENST00000394853 SPRR2AP35326 72 aa4.99□□□□□ -1.61
PPP3CA-202ENST00000394853 LCE3CQ5T5A8 94 aa4.99□□□□□ -1.61
PPP3CA-202ENST00000394853 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.96□□□□□ -1.61
PPP3CA-202ENST00000394853 KRTAP9-7A8MTY7 169 aa4.95□□□□□ -1.62
PPP3CA-202ENST00000394853 MT1EP04732 61 aa4.94□□□□□ -1.62
PPP3CA-202ENST00000394853 DSTQ03001 7570 aaKnown RBP4.93□□□□□ -1.62
PPP3CA-202ENST00000394853 MT1LQ93083 61 aa4.89□□□□□ -1.63
PPP3CA-202ENST00000394853 KRTAP9-6A8MVA2 160 aa4.83□□□□□ -1.64
PPP3CA-202ENST00000394853 SPRR2DP22532 72 aa4.8□□□□□ -1.64
PPP3CA-202ENST00000394853 MT1GP13640 62 aa4.79□□□□□ -1.64
PPP3CA-202ENST00000394853 KRTAP19-3Q7Z4W3 81 aa4.79□□□□□ -1.64
PPP3CA-202ENST00000394853 KRTAP4-3Q9BYR4 195 aa4.77□□□□□ -1.65
PPP3CA-202ENST00000394853 LCE1EQ5T753 118 aa4.75□□□□□ -1.65
PPP3CA-202ENST00000394853 KRTAP6-3Q3LI67 103 aa4.75□□□□□ -1.65
PPP3CA-202ENST00000394853 LCE1AQ5T7P2 110 aa4.69□□□□□ -1.66
PPP3CA-202ENST00000394853 MDN1Q9NU22 5596 aa4.69□□□□□ -1.66
PPP3CA-202ENST00000394853 OBSCNQ5VST9 7968 aa4.68□□□□□ -1.66
PPP3CA-202ENST00000394853 LOC100996750A0A140TA64 210 aa4.67□□□□□ -1.66
PPP3CA-202ENST00000394853 SYNE1Q8NF91 8797 aaKnown RBP4.65□□□□□ -1.66
PPP3CA-202ENST00000394853 KRTAP2-2Q9BYT5 123 aa4.65□□□□□ -1.66
PPP3CA-202ENST00000394853 MT1MQ8N339 61 aa4.65□□□□□ -1.67
PPP3CA-202ENST00000394853 KRTAP19-4Q3LI73 84 aa4.6□□□□□ -1.67
PPP3CA-202ENST00000394853 LCE1FQ5T754 118 aa4.58□□□□□ -1.68
PPP3CA-202ENST00000394853 LCE5AQ5TCM9 118 aa4.55□□□□□ -1.68
PPP3CA-202ENST00000394853 KRTAP5-9P26371 169 aa4.53□□□□□ -1.68
PPP3CA-202ENST00000394853 LCE3BQ5TA77 95 aa4.51□□□□□ -1.69
PPP3CA-202ENST00000394853 LCE1DQ5T752 114 aa4.44□□□□□ -1.7
PPP3CA-202ENST00000394853 KRTAP20-1Q3LI63 56 aa4.43□□□□□ -1.7
PPP3CA-202ENST00000394853 KRTAP2-3P0C7H8 128 aa4.42□□□□□ -1.7
PPP3CA-202ENST00000394853 KRTAP2-4Q9BYR9 128 aa4.42□□□□□ -1.7
PPP3CA-202ENST00000394853 KRTAP2-1Q9BYU5 128 aa4.42□□□□□ -1.7
PPP3CA-202ENST00000394853 MUC19Q7Z5P9 8384 aa4.38□□□□□ -1.71
PPP3CA-202ENST00000394853 KRTAP12-4P60329 112 aa4.37□□□□□ -1.71
PPP3CA-202ENST00000394853 NEBP20929 6669 aa4.37□□□□□ -1.71
PPP3CA-202ENST00000394853 LCE3EQ5T5B0 92 aa4.31□□□□□ -1.72
PPP3CA-202ENST00000394853 MT4P47944 62 aa4.31□□□□□ -1.72
PPP3CA-202ENST00000394853 KRTAP4-9Q9BYQ8 210 aa4.21□□□□□ -1.73
PPP3CA-202ENST00000394853 KRTAP6-1Q3LI64 71 aa4.19□□□□□ -1.74
PPP3CA-202ENST00000394853 KRTAP9-4Q9BYQ2 154 aa4.19□□□□□ -1.74
PPP3CA-202ENST00000394853 LCE3DQ9BYE3 92 aa4.14□□□□□ -1.75
PPP3CA-202ENST00000394853 MT1AP04731 61 aa4.09□□□□□ -1.75
PPP3CA-202ENST00000394853 KRTAP5-5Q701N2 237 aaPredicted RBP4.07□□□□□ -1.76
PPP3CA-202ENST00000394853 PRM1P04553 51 aa4.03□□□□□ -1.76
PPP3CA-202ENST00000394853 LCE4AQ5TA78 99 aa3.98□□□□□ -1.77
PPP3CA-202ENST00000394853 KRTAP4-6Q9BYQ5 205 aa3.92□□□□□ -1.78
PPP3CA-202ENST00000394853 MT3P25713 68 aa3.91□□□□□ -1.78
PPP3CA-202ENST00000394853 KRTAP6-2Q3LI66 62 aa3.87□□□□□ -1.79
PPP3CA-202ENST00000394853 KRTAP9-9Q9BYP9 154 aa3.83□□□□□ -1.8
PPP3CA-202ENST00000394853 KRTAP20-2Q3LI61 65 aa3.72□□□□□ -1.81
PPP3CA-202ENST00000394853 KRTAP5-4Q6L8H1 288 aa3.72□□□□□ -1.81
PPP3CA-202ENST00000394853 GPR98Q8WXG9 6306 aa3.7□□□□□ -1.82
PPP3CA-202ENST00000394853 HMCN1Q96RW7 5635 aa3.66□□□□□ -1.82
PPP3CA-202ENST00000394853 LCE1BQ5T7P3 118 aa3.55□□□□□ -1.84
PPP3CA-202ENST00000394853 KRTAP5-2Q701N4 177 aa3.41□□□□□ -1.86
PPP3CA-202ENST00000394853 KRTAP5-3Q6L8H2 238 aa3.37□□□□□ -1.87
PPP3CA-202ENST00000394853 KRTAP4-11Q9BYQ6 195 aa3.35□□□□□ -1.87
PPP3CA-202ENST00000394853 MUC5ACP98088 5654 aa3.31□□□□□ -1.88
PPP3CA-202ENST00000394853 AHNAK2Q8IVF2 5795 aa3.24□□□□□ -1.89
PPP3CA-202ENST00000394853 LCE1CQ5T751 118 aa3.07□□□□□ -1.92
PPP3CA-202ENST00000394853 KRTAP5-8O75690 187 aa3.06□□□□□ -1.92
PPP3CA-202ENST00000394853 KRTAP5-10Q6L8G5 202 aa3□□□□□ -1.93
PPP3CA-202ENST00000394853 KRTAP5-1Q6L8H4 278 aa2.99□□□□□ -1.93
PPP3CA-202ENST00000394853 KRTAP4-2Q9BYR5 136 aa2.94□□□□□ -1.94
PPP3CA-202ENST00000394853 MUC5BQ9HC84 5762 aaPredicted RBP2.92□□□□□ -1.94
PPP3CA-202ENST00000394853 KRTAP4-12Q9BQ66 201 aa2.89□□□□□ -1.95
PPP3CA-202ENST00000394853 KRTAP5-7Q6L8G8 165 aa2.78□□□□□ -1.96
PPP3CA-202ENST00000394853 KRTAP4-4Q9BYR3 166 aa2.7□□□□□ -1.98
PPP3CA-202ENST00000394853 AHNAKQ09666 5890 aaKnown RBP2.68□□□□□ -1.98
PPP3CA-202ENST00000394853 KRTAP21-2Q3LI59 83 aa2.67□□□□□ -1.98
PPP3CA-202ENST00000394853 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.64□□□□□ -1.99
PPP3CA-202ENST00000394853 KRTAP5-11Q6L8G4 156 aa2.5□□□□□ -2.01
PPP3CA-202ENST00000394853 KRTAP21-1Q3LI58 79 aa2.27□□□□□ -2.05
PPP3CA-202ENST00000394853 PHGR1C9JFL3 82 aa2.18□□□□□ -2.06
PPP3CA-202ENST00000394853 MUC16Q8WXI7 14507 aa1.41□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 46.9 ms