RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 FCGBPQ9Y6R7 5405 aaPredicted RBP3.94□□□□□ -1.78
SLC28A1-203ENST00000394573 PRM1P04553 51 aa3.93□□□□□ -1.78
SLC28A1-203ENST00000394573 KRTAP4-3Q9BYR4 195 aa3.92□□□□□ -1.78
SLC28A1-203ENST00000394573 KRTAP9-3Q9BYQ3 159 aa3.92□□□□□ -1.78
SLC28A1-203ENST00000394573 MT1LQ93083 61 aa3.91□□□□□ -1.78
SLC28A1-203ENST00000394573 KRTAP2-2Q9BYT5 123 aa3.9□□□□□ -1.79
SLC28A1-203ENST00000394573 MT1GP13640 62 aa3.89□□□□□ -1.79
SLC28A1-203ENST00000394573 OBSCNQ5VST9 7968 aa3.89□□□□□ -1.79
SLC28A1-203ENST00000394573 KRTAP9-6A0A140TA67 174 aa3.89□□□□□ -1.79
SLC28A1-203ENST00000394573 KRTAP9-2Q9BYQ4 174 aa3.89□□□□□ -1.79
SLC28A1-203ENST00000394573 DSTQ03001 7570 aaKnown RBP3.88□□□□□ -1.79
SLC28A1-203ENST00000394573 FSIP2Q5CZC0 6907 aa3.83□□□□□ -1.8
SLC28A1-203ENST00000394573 LCE1EQ5T753 118 aa3.82□□□□□ -1.8
SLC28A1-203ENST00000394573 LCE3BQ5TA77 95 aa3.82□□□□□ -1.8
SLC28A1-203ENST00000394573 LCE2BO14633 110 aa3.8□□□□□ -1.8
SLC28A1-203ENST00000394573 MT1EP04732 61 aa3.79□□□□□ -1.8
SLC28A1-203ENST00000394573 KRTAP5-5Q701N2 237 aaPredicted RBP3.75□□□□□ -1.81
SLC28A1-203ENST00000394573 MUC12Q9UKN1 5478 aa3.73□□□□□ -1.81
SLC28A1-203ENST00000394573 SSPOA2VEC9 5147 aa3.71□□□□□ -1.82
SLC28A1-203ENST00000394573 LCE3DQ9BYE3 92 aa3.65□□□□□ -1.83
SLC28A1-203ENST00000394573 LCE3EQ5T5B0 92 aa3.64□□□□□ -1.83
SLC28A1-203ENST00000394573 LCE1DQ5T752 114 aa3.63□□□□□ -1.83
SLC28A1-203ENST00000394573 KRTAP19-4Q3LI73 84 aa3.61□□□□□ -1.83
SLC28A1-203ENST00000394573 KRTAP6-2Q3LI66 62 aa3.55□□□□□ -1.84
SLC28A1-203ENST00000394573 MT1MQ8N339 61 aa3.51□□□□□ -1.85
SLC28A1-203ENST00000394573 MT1AP04731 61 aa3.5□□□□□ -1.85
SLC28A1-203ENST00000394573 LCE2DQ5TA82 110 aaPredicted RBP3.5□□□□□ -1.85
SLC28A1-203ENST00000394573 KRTAP19-6Q3LI70 58 aa3.46□□□□□ -1.86
SLC28A1-203ENST00000394573 KRTAP6-1Q3LI64 71 aa3.43□□□□□ -1.86
SLC28A1-203ENST00000394573 SYNE2Q8WXH0 6885 aaKnown RBP3.41□□□□□ -1.86
SLC28A1-203ENST00000394573 KRTAP19-3Q7Z4W3 81 aa3.38□□□□□ -1.87
SLC28A1-203ENST00000394573 MACF1Q9UPN3 7388 aaKnown RBP3.34□□□□□ -1.87
SLC28A1-203ENST00000394573 LCE1FQ5T754 118 aa3.25□□□□□ -1.89
SLC28A1-203ENST00000394573 SPRR2FQ96RM1 72 aa3.23□□□□□ -1.89
SLC28A1-203ENST00000394573 MDN1Q9NU22 5596 aa3.21□□□□□ -1.9
SLC28A1-203ENST00000394573 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.2□□□□□ -1.9
SLC28A1-203ENST00000394573 MUC19Q7Z5P9 8384 aa3.16□□□□□ -1.9
SLC28A1-203ENST00000394573 LCE5AQ5TCM9 118 aa3.13□□□□□ -1.91
SLC28A1-203ENST00000394573 KRTAP5-9P26371 169 aa3.01□□□□□ -1.93
SLC28A1-203ENST00000394573 SPRR2EP22531 72 aa3□□□□□ -1.93
SLC28A1-203ENST00000394573 SPRR2BP35325 72 aa3□□□□□ -1.93
SLC28A1-203ENST00000394573 SPRR2AP35326 72 aa3□□□□□ -1.93
SLC28A1-203ENST00000394573 KRTAP4-11Q9BYQ6 195 aa2.97□□□□□ -1.93
SLC28A1-203ENST00000394573 KRTAP9-4Q9BYQ2 154 aa2.95□□□□□ -1.94
SLC28A1-203ENST00000394573 SPRR2DP22532 72 aa2.89□□□□□ -1.95
SLC28A1-203ENST00000394573 NEBP20929 6669 aa2.88□□□□□ -1.95
SLC28A1-203ENST00000394573 MT3P25713 68 aa2.83□□□□□ -1.96
SLC28A1-203ENST00000394573 KRTAP20-1Q3LI63 56 aa2.8□□□□□ -1.96
SLC28A1-203ENST00000394573 MUC5ACP98088 5654 aa2.74□□□□□ -1.97
SLC28A1-203ENST00000394573 MT4P47944 62 aa2.59□□□□□ -2
SLC28A1-203ENST00000394573 KRTAP5-10Q6L8G5 202 aa2.55□□□□□ -2
SLC28A1-203ENST00000394573 LCE1CQ5T751 118 aa2.54□□□□□ -2
SLC28A1-203ENST00000394573 LCE1BQ5T7P3 118 aa2.54□□□□□ -2
SLC28A1-203ENST00000394573 KRTAP4-6Q9BYQ5 205 aa2.54□□□□□ -2
SLC28A1-203ENST00000394573 GPR98Q8WXG9 6306 aa2.51□□□□□ -2.01
SLC28A1-203ENST00000394573 KRTAP5-4Q6L8H1 288 aa2.51□□□□□ -2.01
SLC28A1-203ENST00000394573 HMCN1Q96RW7 5635 aa2.48□□□□□ -2.01
SLC28A1-203ENST00000394573 LCE4AQ5TA78 99 aa2.44□□□□□ -2.02
SLC28A1-203ENST00000394573 KRTAP20-2Q3LI61 65 aa2.41□□□□□ -2.02
SLC28A1-203ENST00000394573 KRTAP5-2Q701N4 177 aa2.41□□□□□ -2.02
SLC28A1-203ENST00000394573 KRTAP21-1Q3LI58 79 aa2.4□□□□□ -2.02
SLC28A1-203ENST00000394573 KRTAP5-1Q6L8H4 278 aa2.29□□□□□ -2.04
SLC28A1-203ENST00000394573 KRTAP5-3Q6L8H2 238 aa2.29□□□□□ -2.04
SLC28A1-203ENST00000394573 KRTAP4-4Q9BYR3 166 aa2.23□□□□□ -2.05
SLC28A1-203ENST00000394573 AHNAK2Q8IVF2 5795 aa2.22□□□□□ -2.05
SLC28A1-203ENST00000394573 KRTAP9-9Q9BYP9 154 aa2.12□□□□□ -2.07
SLC28A1-203ENST00000394573 KRTAP5-7Q6L8G8 165 aa2.11□□□□□ -2.07
SLC28A1-203ENST00000394573 KRTAP21-2Q3LI59 83 aa2.1□□□□□ -2.07
SLC28A1-203ENST00000394573 KRTAP4-2Q9BYR5 136 aa2.04□□□□□ -2.08
SLC28A1-203ENST00000394573 KRTAP5-8O75690 187 aa2□□□□□ -2.09
SLC28A1-203ENST00000394573 AHNAKQ09666 5890 aaKnown RBP1.9□□□□□ -2.11
SLC28A1-203ENST00000394573 MUC5BQ9HC84 5762 aaPredicted RBP1.88□□□□□ -2.11
SLC28A1-203ENST00000394573 KRTAP4-12Q9BQ66 201 aa1.81□□□□□ -2.12
SLC28A1-203ENST00000394573 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.79□□□□□ -2.12
SLC28A1-203ENST00000394573 KRTAP5-11Q6L8G4 156 aa1.65□□□□□ -2.14
SLC28A1-203ENST00000394573 PHGR1C9JFL3 82 aa1.44□□□□□ -2.18
SLC28A1-203ENST00000394573 MUC16Q8WXI7 14507 aa1.25□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 6.1 ms