RNA–Protein interactions for RNA: ENST00000394258.6

RCCD1-201, Transcript of RCC1 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RCCD1, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-201ENST00000394258 KRTAP2-4Q9BYR9 128 aa6.56□□□□□ -1.36
RCCD1-201ENST00000394258 KRTAP2-1Q9BYU5 128 aa6.56□□□□□ -1.36
RCCD1-201ENST00000394258 KRTAP19-4Q3LI73 84 aa6.55□□□□□ -1.36
RCCD1-201ENST00000394258 LCE2DQ5TA82 110 aaPredicted RBP6.53□□□□□ -1.36
RCCD1-201ENST00000394258 LOC100996750A0A140TA64 210 aa6.5□□□□□ -1.37
RCCD1-201ENST00000394258 MT1GP13640 62 aa6.42□□□□□ -1.38
RCCD1-201ENST00000394258 DSTQ03001 7570 aaKnown RBP6.42□□□□□ -1.38
RCCD1-201ENST00000394258 KRTAP19-3Q7Z4W3 81 aa6.4□□□□□ -1.39
RCCD1-201ENST00000394258 MT1MQ8N339 61 aa6.38□□□□□ -1.39
RCCD1-201ENST00000394258 CRCT1Q9UGL9 99 aa6.37□□□□□ -1.39
RCCD1-201ENST00000394258 MACF1Q9UPN3 7388 aaKnown RBP6.32□□□□□ -1.4
RCCD1-201ENST00000394258 SPRR2FQ96RM1 72 aa6.32□□□□□ -1.4
RCCD1-201ENST00000394258 LCE5AQ5TCM9 118 aa6.19□□□□□ -1.42
RCCD1-201ENST00000394258 SYNE2Q8WXH0 6885 aaKnown RBP6.16□□□□□ -1.42
RCCD1-201ENST00000394258 MDN1Q9NU22 5596 aa6.06□□□□□ -1.44
RCCD1-201ENST00000394258 KRTAP12-4P60329 112 aa6.04□□□□□ -1.44
RCCD1-201ENST00000394258 KRTAP9-2Q9BYQ4 174 aa6.01□□□□□ -1.45
RCCD1-201ENST00000394258 LCE3BQ5TA77 95 aa5.92□□□□□ -1.46
RCCD1-201ENST00000394258 SYNE1Q8NF91 8797 aaKnown RBP5.9□□□□□ -1.47
RCCD1-201ENST00000394258 LCE1AQ5T7P2 110 aa5.85□□□□□ -1.47
RCCD1-201ENST00000394258 KRTAP4-9Q9BYQ8 210 aa5.84□□□□□ -1.47
RCCD1-201ENST00000394258 KRTAP6-1Q3LI64 71 aa5.81□□□□□ -1.48
RCCD1-201ENST00000394258 KRTAP5-9P26371 169 aa5.78□□□□□ -1.48
RCCD1-201ENST00000394258 SPRR2EP22531 72 aa5.76□□□□□ -1.49
RCCD1-201ENST00000394258 SPRR2BP35325 72 aa5.76□□□□□ -1.49
RCCD1-201ENST00000394258 SPRR2AP35326 72 aa5.76□□□□□ -1.49
RCCD1-201ENST00000394258 MT1AP04731 61 aa5.68□□□□□ -1.5
RCCD1-201ENST00000394258 KRTAP5-5Q701N2 237 aaPredicted RBP5.61□□□□□ -1.51
RCCD1-201ENST00000394258 OBSCNQ5VST9 7968 aa5.51□□□□□ -1.53
RCCD1-201ENST00000394258 SPRR2DP22532 72 aa5.5□□□□□ -1.53
RCCD1-201ENST00000394258 KRTAP9-7A8MTY7 169 aa5.5□□□□□ -1.53
RCCD1-201ENST00000394258 LCE3DQ9BYE3 92 aa5.48□□□□□ -1.53
RCCD1-201ENST00000394258 PRM1P04553 51 aa5.41□□□□□ -1.54
RCCD1-201ENST00000394258 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.39□□□□□ -1.55
RCCD1-201ENST00000394258 LCE3EQ5T5B0 92 aa5.38□□□□□ -1.55
RCCD1-201ENST00000394258 KRTAP9-4Q9BYQ2 154 aa5.37□□□□□ -1.55
RCCD1-201ENST00000394258 KRTAP6-3Q3LI67 103 aa5.34□□□□□ -1.55
RCCD1-201ENST00000394258 KRTAP9-6A0A140TA67 174 aa5.34□□□□□ -1.55
RCCD1-201ENST00000394258 KRTAP6-2Q3LI66 62 aa5.24□□□□□ -1.57
RCCD1-201ENST00000394258 MT3P25713 68 aa5.12□□□□□ -1.59
RCCD1-201ENST00000394258 NEBP20929 6669 aa5.02□□□□□ -1.61
RCCD1-201ENST00000394258 KRTAP5-4Q6L8H1 288 aa4.97□□□□□ -1.61
RCCD1-201ENST00000394258 KRTAP4-6Q9BYQ5 205 aa4.94□□□□□ -1.62
RCCD1-201ENST00000394258 MT4P47944 62 aa4.93□□□□□ -1.62
RCCD1-201ENST00000394258 KRTAP2-2Q9BYT5 123 aa4.81□□□□□ -1.64
RCCD1-201ENST00000394258 KRTAP20-2Q3LI61 65 aa4.73□□□□□ -1.65
RCCD1-201ENST00000394258 HMCN1Q96RW7 5635 aa4.67□□□□□ -1.66
RCCD1-201ENST00000394258 LCE4AQ5TA78 99 aa4.67□□□□□ -1.66
RCCD1-201ENST00000394258 KRTAP5-2Q701N4 177 aa4.61□□□□□ -1.67
RCCD1-201ENST00000394258 LCE1DQ5T752 114 aa4.59□□□□□ -1.67
RCCD1-201ENST00000394258 LCE1EQ5T753 118 aa4.51□□□□□ -1.69
RCCD1-201ENST00000394258 KRTAP5-3Q6L8H2 238 aa4.48□□□□□ -1.69
RCCD1-201ENST00000394258 KRTAP20-1Q3LI63 56 aa4.45□□□□□ -1.7
RCCD1-201ENST00000394258 MUC5ACP98088 5654 aa4.38□□□□□ -1.71
RCCD1-201ENST00000394258 LCE1BQ5T7P3 118 aa4.27□□□□□ -1.73
RCCD1-201ENST00000394258 KRTAP4-11Q9BYQ6 195 aa4.12□□□□□ -1.75
RCCD1-201ENST00000394258 KRTAP5-10Q6L8G5 202 aa4□□□□□ -1.77
RCCD1-201ENST00000394258 KRTAP4-2Q9BYR5 136 aa4□□□□□ -1.77
RCCD1-201ENST00000394258 KRTAP5-1Q6L8H4 278 aa3.98□□□□□ -1.77
RCCD1-201ENST00000394258 LCE1CQ5T751 118 aa3.94□□□□□ -1.78
RCCD1-201ENST00000394258 KRTAP5-8O75690 187 aa3.76□□□□□ -1.81
RCCD1-201ENST00000394258 AHNAK2Q8IVF2 5795 aa3.73□□□□□ -1.81
RCCD1-201ENST00000394258 KRTAP21-2Q3LI59 83 aa3.72□□□□□ -1.81
RCCD1-201ENST00000394258 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.67□□□□□ -1.82
RCCD1-201ENST00000394258 MUC19Q7Z5P9 8384 aa3.61□□□□□ -1.83
RCCD1-201ENST00000394258 KRTAP5-7Q6L8G8 165 aa3.59□□□□□ -1.83
RCCD1-201ENST00000394258 LCE1FQ5T754 118 aa3.55□□□□□ -1.84
RCCD1-201ENST00000394258 KRTAP4-4Q9BYR3 166 aa3.53□□□□□ -1.84
RCCD1-201ENST00000394258 MUC5BQ9HC84 5762 aaPredicted RBP3.5□□□□□ -1.85
RCCD1-201ENST00000394258 KRTAP4-12Q9BQ66 201 aa3.39□□□□□ -1.87
RCCD1-201ENST00000394258 KRTAP5-11Q6L8G4 156 aa3.38□□□□□ -1.87
RCCD1-201ENST00000394258 GPR98Q8WXG9 6306 aa3.36□□□□□ -1.87
RCCD1-201ENST00000394258 KRTAP21-1Q3LI58 79 aa3.33□□□□□ -1.88
RCCD1-201ENST00000394258 KRTAP9-9Q9BYP9 154 aa3.21□□□□□ -1.9
RCCD1-201ENST00000394258 PHGR1C9JFL3 82 aa2.96□□□□□ -1.94
RCCD1-201ENST00000394258 AHNAKQ09666 5890 aaKnown RBP2.69□□□□□ -1.98
RCCD1-201ENST00000394258 MUC16Q8WXI7 14507 aa1.92□□□□□ -2.1
Retrieved 77 of 20,778 RNA–protein pairs in 8.7 ms