RNA–Protein interactions for RNA: ENST00000394185.6

CLDND1-204, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLDND1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-204ENST00000394185 MT1LQ93083 61 aa6.35□□□□□ -1.39
CLDND1-204ENST00000394185 KRTAP4-7Q9BYR0 210 aa6.33□□□□□ -1.4
CLDND1-204ENST00000394185 SPRR2FQ96RM1 72 aa6.21□□□□□ -1.41
CLDND1-204ENST00000394185 MDN1Q9NU22 5596 aa6.17□□□□□ -1.42
CLDND1-204ENST00000394185 KRTAP9-6A8MVA2 160 aa6.16□□□□□ -1.42
CLDND1-204ENST00000394185 KRTAP19-3Q7Z4W3 81 aa6.13□□□□□ -1.43
CLDND1-204ENST00000394185 KRTAP4-3Q9BYR4 195 aa6.09□□□□□ -1.43
CLDND1-204ENST00000394185 KRTAP19-4Q3LI73 84 aa6.08□□□□□ -1.44
CLDND1-204ENST00000394185 MT1MQ8N339 61 aa6.06□□□□□ -1.44
CLDND1-204ENST00000394185 MT1GP13640 62 aa6.05□□□□□ -1.44
CLDND1-204ENST00000394185 DSTQ03001 7570 aaKnown RBP6.02□□□□□ -1.45
CLDND1-204ENST00000394185 LCE5AQ5TCM9 118 aa6.01□□□□□ -1.45
CLDND1-204ENST00000394185 KRTAP5-9P26371 169 aa6□□□□□ -1.45
CLDND1-204ENST00000394185 KRTAP9-6A0A140TA67 174 aa5.97□□□□□ -1.45
CLDND1-204ENST00000394185 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.93□□□□□ -1.46
CLDND1-204ENST00000394185 LCE1AQ5T7P2 110 aa5.9□□□□□ -1.47
CLDND1-204ENST00000394185 SPRR2EP22531 72 aa5.81□□□□□ -1.48
CLDND1-204ENST00000394185 SPRR2BP35325 72 aa5.81□□□□□ -1.48
CLDND1-204ENST00000394185 SPRR2AP35326 72 aa5.81□□□□□ -1.48
CLDND1-204ENST00000394185 KRTAP6-3Q3LI67 103 aa5.77□□□□□ -1.49
CLDND1-204ENST00000394185 KRTAP2-3P0C7H8 128 aa5.65□□□□□ -1.51
CLDND1-204ENST00000394185 KRTAP2-4Q9BYR9 128 aa5.65□□□□□ -1.51
CLDND1-204ENST00000394185 KRTAP2-1Q9BYU5 128 aa5.65□□□□□ -1.51
CLDND1-204ENST00000394185 A0A0A0MQY5 61 aa5.59□□□□□ -1.51
CLDND1-204ENST00000394185 SPRR2DP22532 72 aa5.57□□□□□ -1.52
CLDND1-204ENST00000394185 KRTAP9-7A8MTY7 169 aa5.52□□□□□ -1.53
CLDND1-204ENST00000394185 NEBP20929 6669 aa5.52□□□□□ -1.53
CLDND1-204ENST00000394185 KRTAP5-3Q6L8H2 238 aa5.48□□□□□ -1.53
CLDND1-204ENST00000394185 KRTAP5-5Q701N2 237 aaPredicted RBP5.44□□□□□ -1.54
CLDND1-204ENST00000394185 KRTAP6-1Q3LI64 71 aa5.39□□□□□ -1.55
CLDND1-204ENST00000394185 SYNE1Q8NF91 8797 aaKnown RBP5.36□□□□□ -1.55
CLDND1-204ENST00000394185 LCE3BQ5TA77 95 aa5.35□□□□□ -1.55
CLDND1-204ENST00000394185 MT1AP04731 61 aa5.33□□□□□ -1.56
CLDND1-204ENST00000394185 INE1O15225 51 aa5.18□□□□□ -1.58
CLDND1-204ENST00000394185 KRTAP9-9Q9BYP9 154 aa5.18□□□□□ -1.58
CLDND1-204ENST00000394185 KRTAP9-4Q9BYQ2 154 aa5.18□□□□□ -1.58
CLDND1-204ENST00000394185 KRTAP4-9Q9BYQ8 210 aa5.13□□□□□ -1.59
CLDND1-204ENST00000394185 KRTAP4-2Q9BYR5 136 aa5.08□□□□□ -1.6
CLDND1-204ENST00000394185 KRTAP5-4Q6L8H1 288 aa5.06□□□□□ -1.6
CLDND1-204ENST00000394185 KRTAP6-2Q3LI66 62 aa4.94□□□□□ -1.62
CLDND1-204ENST00000394185 KRTAP12-4P60329 112 aa4.93□□□□□ -1.62
CLDND1-204ENST00000394185 MT4P47944 62 aa4.92□□□□□ -1.62
CLDND1-204ENST00000394185 KRTAP2-2Q9BYT5 123 aa4.91□□□□□ -1.62
CLDND1-204ENST00000394185 LCE1DQ5T752 114 aa4.9□□□□□ -1.62
CLDND1-204ENST00000394185 HMCN1Q96RW7 5635 aa4.88□□□□□ -1.63
CLDND1-204ENST00000394185 KRTAP20-1Q3LI63 56 aa4.87□□□□□ -1.63
CLDND1-204ENST00000394185 OBSCNQ5VST9 7968 aa4.86□□□□□ -1.63
CLDND1-204ENST00000394185 LCE4AQ5TA78 99 aa4.85□□□□□ -1.63
CLDND1-204ENST00000394185 KRTAP4-12Q9BQ66 201 aa4.82□□□□□ -1.64
CLDND1-204ENST00000394185 MT3P25713 68 aa4.81□□□□□ -1.64
CLDND1-204ENST00000394185 LCE3DQ9BYE3 92 aa4.8□□□□□ -1.64
CLDND1-204ENST00000394185 KRTAP20-2Q3LI61 65 aa4.76□□□□□ -1.65
CLDND1-204ENST00000394185 LCE3EQ5T5B0 92 aa4.67□□□□□ -1.66
CLDND1-204ENST00000394185 KRTAP5-2Q701N4 177 aa4.63□□□□□ -1.67
CLDND1-204ENST00000394185 KRTAP4-11Q9BYQ6 195 aa4.53□□□□□ -1.68
CLDND1-204ENST00000394185 PRM1P04553 51 aa4.24□□□□□ -1.73
CLDND1-204ENST00000394185 AHNAK2Q8IVF2 5795 aa4.14□□□□□ -1.75
CLDND1-204ENST00000394185 LCE1EQ5T753 118 aa4.09□□□□□ -1.76
CLDND1-204ENST00000394185 MUC5ACP98088 5654 aa4.07□□□□□ -1.76
CLDND1-204ENST00000394185 KRTAP5-1Q6L8H4 278 aa4.02□□□□□ -1.77
CLDND1-204ENST00000394185 LCE1BQ5T7P3 118 aa3.99□□□□□ -1.77
CLDND1-204ENST00000394185 KRTAP5-8O75690 187 aa3.93□□□□□ -1.78
CLDND1-204ENST00000394185 KRTAP5-10Q6L8G5 202 aa3.91□□□□□ -1.78
CLDND1-204ENST00000394185 LCE1CQ5T751 118 aa3.85□□□□□ -1.79
CLDND1-204ENST00000394185 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.85□□□□□ -1.79
CLDND1-204ENST00000394185 KRTAP5-7Q6L8G8 165 aa3.76□□□□□ -1.81
CLDND1-204ENST00000394185 GPR98Q8WXG9 6306 aa3.65□□□□□ -1.83
CLDND1-204ENST00000394185 MUC5BQ9HC84 5762 aaPredicted RBP3.59□□□□□ -1.83
CLDND1-204ENST00000394185 KRTAP21-2Q3LI59 83 aa3.51□□□□□ -1.85
CLDND1-204ENST00000394185 KRTAP5-11Q6L8G4 156 aa3.37□□□□□ -1.87
CLDND1-204ENST00000394185 KRTAP4-4Q9BYR3 166 aa3.22□□□□□ -1.89
CLDND1-204ENST00000394185 AHNAKQ09666 5890 aaKnown RBP2.99□□□□□ -1.93
CLDND1-204ENST00000394185 PHGR1C9JFL3 82 aa2.92□□□□□ -1.94
CLDND1-204ENST00000394185 LCE1FQ5T754 118 aa2.91□□□□□ -1.94
CLDND1-204ENST00000394185 MUC19Q7Z5P9 8384 aa2.88□□□□□ -1.95
CLDND1-204ENST00000394185 KRTAP21-1Q3LI58 79 aa2.57□□□□□ -2
CLDND1-204ENST00000394185 MUC16Q8WXI7 14507 aa1.88□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 59.5 ms