RNA–Protein interactions for RNA: ENST00000393561.5

LAMB1-204, Transcript of laminin subunit beta 1, humanhuman

TSL 5 BASIC

Gene LAMB1, Length 5,766 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB1-204ENST00000393561 MT4P47944 62 aa3.53□□□□□ -1.84
LAMB1-204ENST00000393561 LOC100996750A0A140TA64 210 aa3.53□□□□□ -1.84
LAMB1-204ENST00000393561 PRM1P04553 51 aa3.52□□□□□ -1.85
LAMB1-204ENST00000393561 KRTAP4-3Q9BYR4 195 aa3.49□□□□□ -1.85
LAMB1-204ENST00000393561 KRTAP9-2Q9BYQ4 174 aa3.48□□□□□ -1.85
LAMB1-204ENST00000393561 KRTAP19-7Q3SYF9 63 aa3.45□□□□□ -1.86
LAMB1-204ENST00000393561 MUC2Q02817 5179 aa3.45□□□□□ -1.86
LAMB1-204ENST00000393561 MT1AP04731 61 aa3.44□□□□□ -1.86
LAMB1-204ENST00000393561 LCE1BQ5T7P3 118 aa3.42□□□□□ -1.86
LAMB1-204ENST00000393561 LCE2AQ5TA79 106 aaPredicted RBP3.42□□□□□ -1.86
LAMB1-204ENST00000393561 KRTAP9-6A0A140TA67 174 aa3.41□□□□□ -1.86
LAMB1-204ENST00000393561 LCE1DQ5T752 114 aa3.41□□□□□ -1.86
LAMB1-204ENST00000393561 KRTAP2-3P0C7H8 128 aa3.35□□□□□ -1.87
LAMB1-204ENST00000393561 KRTAP2-4Q9BYR9 128 aa3.35□□□□□ -1.87
LAMB1-204ENST00000393561 KRTAP2-1Q9BYU5 128 aa3.35□□□□□ -1.87
LAMB1-204ENST00000393561 RNF213Q63HN8 5207 aa3.35□□□□□ -1.87
LAMB1-204ENST00000393561 FAT4Q6V0I7 4981 aa3.32□□□□□ -1.88
LAMB1-204ENST00000393561 SYNE1Q8NF91 8797 aaKnown RBP3.3□□□□□ -1.88
LAMB1-204ENST00000393561 HMCN2Q8NDA2 5059 aa3.3□□□□□ -1.88
LAMB1-204ENST00000393561 KRTAP4-9Q9BYQ8 210 aa3.27□□□□□ -1.89
LAMB1-204ENST00000393561 UBR4Q5T4S7 5183 aa3.26□□□□□ -1.89
LAMB1-204ENST00000393561 LCE1AQ5T7P2 110 aa3.26□□□□□ -1.89
LAMB1-204ENST00000393561 KRTAP20-1Q3LI63 56 aa3.25□□□□□ -1.89
LAMB1-204ENST00000393561 LCE5AQ5TCM9 118 aa3.21□□□□□ -1.9
LAMB1-204ENST00000393561 KRTAP9-7A8MTY7 169 aa3.19□□□□□ -1.9
LAMB1-204ENST00000393561 KRTAP6-3Q3LI67 103 aa3.18□□□□□ -1.9
LAMB1-204ENST00000393561 KRTAP6-1Q3LI64 71 aa3.17□□□□□ -1.9
LAMB1-204ENST00000393561 KRTAP9-4Q9BYQ2 154 aa3.16□□□□□ -1.9
LAMB1-204ENST00000393561 KRTAP6-2Q3LI66 62 aa3.14□□□□□ -1.91
LAMB1-204ENST00000393561 KRTAP9-6A8MVA2 160 aa3.14□□□□□ -1.91
LAMB1-204ENST00000393561 LCE4AQ5TA78 99 aa3.12□□□□□ -1.91
LAMB1-204ENST00000393561 FSIP2Q5CZC0 6907 aa3.11□□□□□ -1.91
LAMB1-204ENST00000393561 SYNE2Q8WXH0 6885 aaKnown RBP3.06□□□□□ -1.92
LAMB1-204ENST00000393561 OBSCNQ5VST9 7968 aa3.04□□□□□ -1.92
LAMB1-204ENST00000393561 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.02□□□□□ -1.93
LAMB1-204ENST00000393561 KRTAP2-2Q9BYT5 123 aa3.01□□□□□ -1.93
LAMB1-204ENST00000393561 LCE1CQ5T751 118 aa2.91□□□□□ -1.94
LAMB1-204ENST00000393561 LCE1EQ5T753 118 aa2.91□□□□□ -1.94
LAMB1-204ENST00000393561 LCE1FQ5T754 118 aa2.91□□□□□ -1.94
LAMB1-204ENST00000393561 USH2AO75445 5202 aa2.86□□□□□ -1.95
LAMB1-204ENST00000393561 FCGBPQ9Y6R7 5405 aaPredicted RBP2.71□□□□□ -1.98
LAMB1-204ENST00000393561 KMT2DO14686 5537 aa2.7□□□□□ -1.98
LAMB1-204ENST00000393561 KRTAP9-9Q9BYP9 154 aa2.7□□□□□ -1.98
LAMB1-204ENST00000393561 KRTAP5-9P26371 169 aa2.69□□□□□ -1.98
LAMB1-204ENST00000393561 SSPOA2VEC9 5147 aa2.61□□□□□ -1.99
LAMB1-204ENST00000393561 MACF1Q9UPN3 7388 aaKnown RBP2.59□□□□□ -1.99
LAMB1-204ENST00000393561 NEBP20929 6669 aa2.59□□□□□ -1.99
LAMB1-204ENST00000393561 DSTQ03001 7570 aaKnown RBP2.59□□□□□ -2
LAMB1-204ENST00000393561 KRTAP20-2Q3LI61 65 aa2.58□□□□□ -2
LAMB1-204ENST00000393561 KRTAP4-6Q9BYQ5 205 aa2.57□□□□□ -2
LAMB1-204ENST00000393561 KRTAP4-11Q9BYQ6 195 aa2.57□□□□□ -2
LAMB1-204ENST00000393561 GPR98Q8WXG9 6306 aa2.55□□□□□ -2
LAMB1-204ENST00000393561 KRTAP5-4Q6L8H1 288 aa2.41□□□□□ -2.02
LAMB1-204ENST00000393561 MDN1Q9NU22 5596 aa2.39□□□□□ -2.03
LAMB1-204ENST00000393561 MUC12Q9UKN1 5478 aa2.39□□□□□ -2.03
LAMB1-204ENST00000393561 MUC19Q7Z5P9 8384 aa2.38□□□□□ -2.03
LAMB1-204ENST00000393561 KRTAP4-4Q9BYR3 166 aa2.35□□□□□ -2.03
LAMB1-204ENST00000393561 KRTAP5-5Q701N2 237 aaPredicted RBP2.34□□□□□ -2.04
LAMB1-204ENST00000393561 KRTAP4-12Q9BQ66 201 aa2.31□□□□□ -2.04
LAMB1-204ENST00000393561 KRTAP4-2Q9BYR5 136 aa2.31□□□□□ -2.04
LAMB1-204ENST00000393561 KRTAP5-3Q6L8H2 238 aa2.1□□□□□ -2.07
LAMB1-204ENST00000393561 MUC5ACP98088 5654 aa2.02□□□□□ -2.09
LAMB1-204ENST00000393561 AHNAK2Q8IVF2 5795 aa1.94□□□□□ -2.1
LAMB1-204ENST00000393561 HMCN1Q96RW7 5635 aa1.92□□□□□ -2.1
LAMB1-204ENST00000393561 KRTAP5-10Q6L8G5 202 aa1.89□□□□□ -2.11
LAMB1-204ENST00000393561 KRTAP5-8O75690 187 aa1.88□□□□□ -2.11
LAMB1-204ENST00000393561 KRTAP5-2Q701N4 177 aa1.85□□□□□ -2.11
LAMB1-204ENST00000393561 PHGR1C9JFL3 82 aa1.79□□□□□ -2.12
LAMB1-204ENST00000393561 MUC5BQ9HC84 5762 aaPredicted RBP1.75□□□□□ -2.13
LAMB1-204ENST00000393561 KRTAP5-11Q6L8G4 156 aa1.71□□□□□ -2.14
LAMB1-204ENST00000393561 KRTAP5-1Q6L8H4 278 aa1.67□□□□□ -2.14
LAMB1-204ENST00000393561 AHNAKQ09666 5890 aaKnown RBP1.61□□□□□ -2.15
LAMB1-204ENST00000393561 KRTAP21-2Q3LI59 83 aa1.59□□□□□ -2.15
LAMB1-204ENST00000393561 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.5□□□□□ -2.17
LAMB1-204ENST00000393561 KRTAP21-1Q3LI58 79 aa1.49□□□□□ -2.17
LAMB1-204ENST00000393561 KRTAP5-7Q6L8G8 165 aa1.36□□□□□ -2.19
LAMB1-204ENST00000393561 MUC16Q8WXI7 14507 aa1.02□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 13.4 ms