RNA–Protein interactions for RNA: ENST00000393164.6

ATP2B1-203, Transcript of ATPase plasma membrane Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2B1, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1-203ENST00000393164 KRTAP10-5P60370 271 aa1.48□□□□□ -2.17
ATP2B1-203ENST00000393164 NDUFAF8A1L188 74 aa1.46□□□□□ -2.17
ATP2B1-203ENST00000393164 USH2AO75445 5202 aa1.46□□□□□ -2.18
ATP2B1-203ENST00000393164 MT1XP80297 61 aa1.46□□□□□ -2.18
ATP2B1-203ENST00000393164 KRTAP5-7Q6L8G8 165 aa1.45□□□□□ -2.18
ATP2B1-203ENST00000393164 TNP1P09430 55 aa1.45□□□□□ -2.18
ATP2B1-203ENST00000393164 FCGBPQ9Y6R7 5405 aaPredicted RBP1.44□□□□□ -2.18
ATP2B1-203ENST00000393164 SYNE2Q8WXH0 6885 aaKnown RBP1.44□□□□□ -2.18
ATP2B1-203ENST00000393164 KRTAP2-2Q9BYT5 123 aa1.44□□□□□ -2.18
ATP2B1-203ENST00000393164 KRTAP2-1Q9BYU5 128 aa1.44□□□□□ -2.18
ATP2B1-203ENST00000393164 KRTAP25-1Q3LHN0 102 aa1.43□□□□□ -2.18
ATP2B1-203ENST00000393164 MACF1Q9UPN3 7388 aaKnown RBP1.43□□□□□ -2.18
ATP2B1-203ENST00000393164 C10orf95Q9H7T3 257 aa1.42□□□□□ -2.18
ATP2B1-203ENST00000393164 KRTAP5-9P26371 169 aa1.4□□□□□ -2.18
ATP2B1-203ENST00000393164 KRTAP10-12P60413 245 aa1.4□□□□□ -2.18
ATP2B1-203ENST00000393164 KRTAP15-1Q3LI76 137 aa1.4□□□□□ -2.19
ATP2B1-203ENST00000393164 KRTAP10-7P60409 375 aaPredicted RBP1.39□□□□□ -2.19
ATP2B1-203ENST00000393164 PP632Q6XCG6 107 aa1.39□□□□□ -2.19
ATP2B1-203ENST00000393164 KRTAP8-1Q8IUC2 63 aa1.38□□□□□ -2.19
ATP2B1-203ENST00000393164 KRTAP4-4Q9BYR3 166 aa1.38□□□□□ -2.19
ATP2B1-203ENST00000393164 LCE3AQ5TA76 89 aa1.35□□□□□ -2.19
ATP2B1-203ENST00000393164 LCE5AQ5TCM9 118 aa1.34□□□□□ -2.19
ATP2B1-203ENST00000393164 SPRR2FQ96RM1 72 aa1.34□□□□□ -2.2
ATP2B1-203ENST00000393164 KRTAP12-3P60328 96 aa1.32□□□□□ -2.2
ATP2B1-203ENST00000393164 LCE1AQ5T7P2 110 aa1.32□□□□□ -2.2
ATP2B1-203ENST00000393164 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.32□□□□□ -2.2
ATP2B1-203ENST00000393164 KRTAP19-5Q3LI72 72 aa1.31□□□□□ -2.2
ATP2B1-203ENST00000393164 KRTAP5-10Q6L8G5 202 aa1.3□□□□□ -2.2
ATP2B1-203ENST00000393164 KRTAP19-7Q3SYF9 63 aa1.3□□□□□ -2.2
ATP2B1-203ENST00000393164 MT1EP04732 61 aa1.29□□□□□ -2.2
ATP2B1-203ENST00000393164 SPRR2EP22531 72 aa1.29□□□□□ -2.2
ATP2B1-203ENST00000393164 SPRR2BP35325 72 aa1.29□□□□□ -2.2
ATP2B1-203ENST00000393164 SPRR2AP35326 72 aa1.29□□□□□ -2.2
ATP2B1-203ENST00000393164 MUC12Q9UKN1 5478 aa1.28□□□□□ -2.2
ATP2B1-203ENST00000393164 KMT2DO14686 5537 aa1.28□□□□□ -2.2
ATP2B1-203ENST00000393164 KRTAP19-3Q7Z4W3 81 aa1.27□□□□□ -2.21
ATP2B1-203ENST00000393164 MT1GP13640 62 aa1.27□□□□□ -2.21
ATP2B1-203ENST00000393164 MT3P25713 68 aa1.26□□□□□ -2.21
ATP2B1-203ENST00000393164 MT1LQ93083 61 aa1.26□□□□□ -2.21
ATP2B1-203ENST00000393164 SPRR2DP22532 72 aa1.25□□□□□ -2.21
ATP2B1-203ENST00000393164 AHNAK2Q8IVF2 5795 aa1.23□□□□□ -2.21
ATP2B1-203ENST00000393164 MT1MQ8N339 61 aa1.22□□□□□ -2.21
ATP2B1-203ENST00000393164 LCE3CQ5T5A8 94 aa1.22□□□□□ -2.21
ATP2B1-203ENST00000393164 MDN1Q9NU22 5596 aa1.22□□□□□ -2.21
ATP2B1-203ENST00000393164 LCE4AQ5TA78 99 aa1.21□□□□□ -2.22
ATP2B1-203ENST00000393164 SPRR5A0A1B0GTR4 108 aa1.19□□□□□ -2.22
ATP2B1-203ENST00000393164 INE1O15225 51 aa1.15□□□□□ -2.22
ATP2B1-203ENST00000393164 KRTAP4-3Q9BYR4 195 aa1.15□□□□□ -2.22
ATP2B1-203ENST00000393164 KRTAP5-5Q701N2 237 aaPredicted RBP1.14□□□□□ -2.23
ATP2B1-203ENST00000393164 KRTAP5-8O75690 187 aa1.12□□□□□ -2.23
ATP2B1-203ENST00000393164 KRTAP5-4Q6L8H1 288 aa1.11□□□□□ -2.23
ATP2B1-203ENST00000393164 DSTQ03001 7570 aaKnown RBP1.1□□□□□ -2.23
ATP2B1-203ENST00000393164 KRTAP9-6A8MVA2 160 aa1.1□□□□□ -2.23
ATP2B1-203ENST00000393164 KRTAP12-4P60329 112 aa1.09□□□□□ -2.23
ATP2B1-203ENST00000393164 MT1AP04731 61 aa1.09□□□□□ -2.24
ATP2B1-203ENST00000393164 MT4P47944 62 aa1.06□□□□□ -2.24
ATP2B1-203ENST00000393164 MUC5ACP98088 5654 aa1.05□□□□□ -2.24
ATP2B1-203ENST00000393164 KRTAP6-1Q3LI64 71 aa1.04□□□□□ -2.24
ATP2B1-203ENST00000393164 KRTAP20-2Q3LI61 65 aa1.02□□□□□ -2.25
ATP2B1-203ENST00000393164 KRTAP5-11Q6L8G4 156 aa1.02□□□□□ -2.25
ATP2B1-203ENST00000393164 SYNE1Q8NF91 8797 aaKnown RBP1.02□□□□□ -2.25
ATP2B1-203ENST00000393164 LCE1EQ5T753 118 aa1.01□□□□□ -2.25
ATP2B1-203ENST00000393164 KRTAP5-1Q6L8H4 278 aa1.01□□□□□ -2.25
ATP2B1-203ENST00000393164 KRTAP5-2Q701N4 177 aa1□□□□□ -2.25
ATP2B1-203ENST00000393164 KRTAP6-2Q3LI66 62 aa0.99□□□□□ -2.25
ATP2B1-203ENST00000393164 LCE1FQ5T754 118 aa0.95□□□□□ -2.26
ATP2B1-203ENST00000393164 LCE3DQ9BYE3 92 aa0.92□□□□□ -2.26
ATP2B1-203ENST00000393164 LCE3EQ5T5B0 92 aa0.89□□□□□ -2.27
ATP2B1-203ENST00000393164 OBSCNQ5VST9 7968 aa0.86□□□□□ -2.27
ATP2B1-203ENST00000393164 LCE1BQ5T7P3 118 aa0.82□□□□□ -2.28
ATP2B1-203ENST00000393164 LCE1CQ5T751 118 aa0.82□□□□□ -2.28
ATP2B1-203ENST00000393164 PHGR1C9JFL3 82 aa0.72□□□□□ -2.29
ATP2B1-203ENST00000393164 PRM1P04553 51 aa0.72□□□□□ -2.29
ATP2B1-203ENST00000393164 KRTAP21-1Q3LI58 79 aa0.72□□□□□ -2.29
ATP2B1-203ENST00000393164 KRTAP21-2Q3LI59 83 aa0.69□□□□□ -2.3
ATP2B1-203ENST00000393164 MUC19Q7Z5P9 8384 aa0.62□□□□□ -2.31
ATP2B1-203ENST00000393164 MUC16Q8WXI7 14507 aa0.56□□□□□ -2.32
Retrieved 77 of 20,778 RNA–protein pairs in 17.1 ms