RNA–Protein interactions for RNA: ENST00000393120.6

MKS1-203, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 1,926 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-203ENST00000393120 KRTAP4-7Q9BYR0 210 aa4.91□□□□□ -1.62
MKS1-203ENST00000393120 KRTAP9-6A0A140TA67 174 aa4.89□□□□□ -1.63
MKS1-203ENST00000393120 FCGBPQ9Y6R7 5405 aaPredicted RBP4.88□□□□□ -1.63
MKS1-203ENST00000393120 MT1GP13640 62 aa4.8□□□□□ -1.64
MKS1-203ENST00000393120 KRTAP19-3Q7Z4W3 81 aa4.8□□□□□ -1.64
MKS1-203ENST00000393120 MT1MQ8N339 61 aa4.75□□□□□ -1.65
MKS1-203ENST00000393120 KRTAP2-3P0C7H8 128 aa4.74□□□□□ -1.65
MKS1-203ENST00000393120 KRTAP2-4Q9BYR9 128 aa4.74□□□□□ -1.65
MKS1-203ENST00000393120 KRTAP2-1Q9BYU5 128 aa4.74□□□□□ -1.65
MKS1-203ENST00000393120 LCE5AQ5TCM9 118 aa4.69□□□□□ -1.66
MKS1-203ENST00000393120 SPRR2FQ96RM1 72 aa4.68□□□□□ -1.66
MKS1-203ENST00000393120 KRTAP4-3Q9BYR4 195 aa4.68□□□□□ -1.66
MKS1-203ENST00000393120 MUC12Q9UKN1 5478 aa4.61□□□□□ -1.67
MKS1-203ENST00000393120 LOC100996750A0A140TA64 210 aa4.6□□□□□ -1.67
MKS1-203ENST00000393120 MACF1Q9UPN3 7388 aaKnown RBP4.6□□□□□ -1.67
MKS1-203ENST00000393120 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.57□□□□□ -1.68
MKS1-203ENST00000393120 KRTAP5-9P26371 169 aa4.55□□□□□ -1.68
MKS1-203ENST00000393120 LCE1AQ5T7P2 110 aa4.46□□□□□ -1.7
MKS1-203ENST00000393120 KRTAP6-3Q3LI67 103 aa4.45□□□□□ -1.7
MKS1-203ENST00000393120 SYNE2Q8WXH0 6885 aaKnown RBP4.42□□□□□ -1.7
MKS1-203ENST00000393120 KRTAP9-7A8MTY7 169 aa4.4□□□□□ -1.7
MKS1-203ENST00000393120 SPRR2EP22531 72 aa4.34□□□□□ -1.71
MKS1-203ENST00000393120 SPRR2BP35325 72 aa4.34□□□□□ -1.71
MKS1-203ENST00000393120 SPRR2AP35326 72 aa4.34□□□□□ -1.71
MKS1-203ENST00000393120 DSTQ03001 7570 aaKnown RBP4.31□□□□□ -1.72
MKS1-203ENST00000393120 MDN1Q9NU22 5596 aa4.3□□□□□ -1.72
MKS1-203ENST00000393120 MT1AP04731 61 aa4.27□□□□□ -1.73
MKS1-203ENST00000393120 KRTAP5-5Q701N2 237 aaPredicted RBP4.27□□□□□ -1.73
MKS1-203ENST00000393120 KRTAP6-1Q3LI64 71 aa4.23□□□□□ -1.73
MKS1-203ENST00000393120 LCE3BQ5TA77 95 aa4.18□□□□□ -1.74
MKS1-203ENST00000393120 SPRR2DP22532 72 aa4.17□□□□□ -1.74
MKS1-203ENST00000393120 KRTAP12-4P60329 112 aa4.08□□□□□ -1.76
MKS1-203ENST00000393120 KRTAP9-4Q9BYQ2 154 aa4.03□□□□□ -1.76
MKS1-203ENST00000393120 NEBP20929 6669 aa4.03□□□□□ -1.76
MKS1-203ENST00000393120 KRTAP4-9Q9BYQ8 210 aa4.01□□□□□ -1.77
MKS1-203ENST00000393120 SYNE1Q8NF91 8797 aaKnown RBP3.96□□□□□ -1.77
MKS1-203ENST00000393120 LCE3DQ9BYE3 92 aa3.95□□□□□ -1.78
MKS1-203ENST00000393120 KRTAP5-4Q6L8H1 288 aa3.9□□□□□ -1.78
MKS1-203ENST00000393120 LCE3EQ5T5B0 92 aa3.89□□□□□ -1.79
MKS1-203ENST00000393120 KRTAP20-1Q3LI63 56 aa3.86□□□□□ -1.79
MKS1-203ENST00000393120 MT3P25713 68 aa3.85□□□□□ -1.79
MKS1-203ENST00000393120 KRTAP6-2Q3LI66 62 aa3.83□□□□□ -1.8
MKS1-203ENST00000393120 KRTAP4-6Q9BYQ5 205 aa3.83□□□□□ -1.8
MKS1-203ENST00000393120 KRTAP2-2Q9BYT5 123 aa3.83□□□□□ -1.8
MKS1-203ENST00000393120 LCE4AQ5TA78 99 aa3.72□□□□□ -1.81
MKS1-203ENST00000393120 MT4P47944 62 aa3.61□□□□□ -1.83
MKS1-203ENST00000393120 KRTAP20-2Q3LI61 65 aa3.61□□□□□ -1.83
MKS1-203ENST00000393120 KRTAP5-2Q701N4 177 aa3.6□□□□□ -1.83
MKS1-203ENST00000393120 LCE1DQ5T752 114 aa3.55□□□□□ -1.84
MKS1-203ENST00000393120 PRM1P04553 51 aa3.54□□□□□ -1.84
MKS1-203ENST00000393120 KRTAP5-3Q6L8H2 238 aa3.48□□□□□ -1.85
MKS1-203ENST00000393120 OBSCNQ5VST9 7968 aa3.47□□□□□ -1.85
MKS1-203ENST00000393120 HMCN1Q96RW7 5635 aa3.42□□□□□ -1.86
MKS1-203ENST00000393120 KRTAP4-12Q9BQ66 201 aa3.32□□□□□ -1.88
MKS1-203ENST00000393120 GPR98Q8WXG9 6306 aa3.3□□□□□ -1.88
MKS1-203ENST00000393120 LCE1EQ5T753 118 aa3.27□□□□□ -1.89
MKS1-203ENST00000393120 KRTAP9-9Q9BYP9 154 aa3.25□□□□□ -1.89
MKS1-203ENST00000393120 KRTAP5-10Q6L8G5 202 aa3.08□□□□□ -1.92
MKS1-203ENST00000393120 MUC5ACP98088 5654 aa3.08□□□□□ -1.92
MKS1-203ENST00000393120 LCE1CQ5T751 118 aa3.06□□□□□ -1.92
MKS1-203ENST00000393120 LCE1BQ5T7P3 118 aa3.06□□□□□ -1.92
MKS1-203ENST00000393120 KRTAP5-1Q6L8H4 278 aa3.06□□□□□ -1.92
MKS1-203ENST00000393120 AHNAK2Q8IVF2 5795 aa3.05□□□□□ -1.92
MKS1-203ENST00000393120 KRTAP4-11Q9BYQ6 195 aa3.05□□□□□ -1.92
MKS1-203ENST00000393120 KRTAP4-2Q9BYR5 136 aa3.03□□□□□ -1.92
MKS1-203ENST00000393120 KRTAP5-8O75690 187 aa2.93□□□□□ -1.94
MKS1-203ENST00000393120 KRTAP5-7Q6L8G8 165 aa2.93□□□□□ -1.94
MKS1-203ENST00000393120 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.9□□□□□ -1.95
MKS1-203ENST00000393120 KRTAP21-2Q3LI59 83 aa2.78□□□□□ -1.97
MKS1-203ENST00000393120 LCE1FQ5T754 118 aa2.74□□□□□ -1.97
MKS1-203ENST00000393120 KRTAP5-11Q6L8G4 156 aa2.65□□□□□ -1.99
MKS1-203ENST00000393120 AHNAKQ09666 5890 aaKnown RBP2.56□□□□□ -2
MKS1-203ENST00000393120 MUC5BQ9HC84 5762 aaPredicted RBP2.52□□□□□ -2.01
MKS1-203ENST00000393120 KRTAP4-4Q9BYR3 166 aa2.41□□□□□ -2.02
MKS1-203ENST00000393120 PHGR1C9JFL3 82 aa2.28□□□□□ -2.04
MKS1-203ENST00000393120 KRTAP21-1Q3LI58 79 aa2.26□□□□□ -2.05
MKS1-203ENST00000393120 MUC19Q7Z5P9 8384 aa2.05□□□□□ -2.08
MKS1-203ENST00000393120 MUC16Q8WXI7 14507 aa1.51□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 55 ms