RNA–Protein interactions for RNA: ENST00000392745.6

TRAF3-203, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 2,459 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-203ENST00000392745 MT1LQ93083 61 aa6.37□□□□□ -1.39
TRAF3-203ENST00000392745 KRTAP2-3P0C7H8 128 aa6.33□□□□□ -1.4
TRAF3-203ENST00000392745 KRTAP2-4Q9BYR9 128 aa6.33□□□□□ -1.4
TRAF3-203ENST00000392745 KRTAP2-1Q9BYU5 128 aa6.33□□□□□ -1.4
TRAF3-203ENST00000392745 MUC12Q9UKN1 5478 aa6.31□□□□□ -1.4
TRAF3-203ENST00000392745 MACF1Q9UPN3 7388 aaKnown RBP6.31□□□□□ -1.4
TRAF3-203ENST00000392745 KRTAP19-4Q3LI73 84 aa6.22□□□□□ -1.41
TRAF3-203ENST00000392745 SPRR2FQ96RM1 72 aa6.18□□□□□ -1.42
TRAF3-203ENST00000392745 SYNE2Q8WXH0 6885 aaKnown RBP6.15□□□□□ -1.43
TRAF3-203ENST00000392745 KRTAP19-3Q7Z4W3 81 aa6.15□□□□□ -1.43
TRAF3-203ENST00000392745 MT1GP13640 62 aa6.09□□□□□ -1.43
TRAF3-203ENST00000392745 KRTAP4-3Q9BYR4 195 aa6.07□□□□□ -1.44
TRAF3-203ENST00000392745 MT1MQ8N339 61 aa6.07□□□□□ -1.44
TRAF3-203ENST00000392745 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.02□□□□□ -1.45
TRAF3-203ENST00000392745 LCE5AQ5TCM9 118 aa6.02□□□□□ -1.45
TRAF3-203ENST00000392745 KRTAP5-9P26371 169 aa5.99□□□□□ -1.45
TRAF3-203ENST00000392745 MDN1Q9NU22 5596 aa5.96□□□□□ -1.46
TRAF3-203ENST00000392745 LOC100996750A0A140TA64 210 aa5.93□□□□□ -1.46
TRAF3-203ENST00000392745 DSTQ03001 7570 aaKnown RBP5.89□□□□□ -1.47
TRAF3-203ENST00000392745 LCE1AQ5T7P2 110 aa5.87□□□□□ -1.47
TRAF3-203ENST00000392745 KRTAP9-7A8MTY7 169 aa5.84□□□□□ -1.47
TRAF3-203ENST00000392745 SPRR2EP22531 72 aa5.77□□□□□ -1.49
TRAF3-203ENST00000392745 SPRR2BP35325 72 aa5.77□□□□□ -1.49
TRAF3-203ENST00000392745 SPRR2AP35326 72 aa5.77□□□□□ -1.49
TRAF3-203ENST00000392745 KRTAP6-3Q3LI67 103 aa5.74□□□□□ -1.49
TRAF3-203ENST00000392745 KRTAP12-4P60329 112 aa5.7□□□□□ -1.5
TRAF3-203ENST00000392745 SPRR2DP22532 72 aa5.54□□□□□ -1.52
TRAF3-203ENST00000392745 NEBP20929 6669 aa5.51□□□□□ -1.53
TRAF3-203ENST00000392745 LCE3BQ5TA77 95 aa5.46□□□□□ -1.54
TRAF3-203ENST00000392745 KRTAP5-5Q701N2 237 aaPredicted RBP5.45□□□□□ -1.54
TRAF3-203ENST00000392745 KRTAP4-9Q9BYQ8 210 aa5.45□□□□□ -1.54
TRAF3-203ENST00000392745 KRTAP6-1Q3LI64 71 aa5.4□□□□□ -1.54
TRAF3-203ENST00000392745 MT1AP04731 61 aa5.37□□□□□ -1.55
TRAF3-203ENST00000392745 SYNE1Q8NF91 8797 aaKnown RBP5.36□□□□□ -1.55
TRAF3-203ENST00000392745 LCE3DQ9BYE3 92 aa5.18□□□□□ -1.58
TRAF3-203ENST00000392745 KRTAP20-1Q3LI63 56 aa5.14□□□□□ -1.59
TRAF3-203ENST00000392745 LCE3EQ5T5B0 92 aa5.13□□□□□ -1.59
TRAF3-203ENST00000392745 KRTAP9-4Q9BYQ2 154 aa5.11□□□□□ -1.59
TRAF3-203ENST00000392745 PRM1P04553 51 aa5.08□□□□□ -1.6
TRAF3-203ENST00000392745 KRTAP5-4Q6L8H1 288 aa5.06□□□□□ -1.6
TRAF3-203ENST00000392745 KRTAP6-2Q3LI66 62 aa4.92□□□□□ -1.62
TRAF3-203ENST00000392745 KRTAP2-2Q9BYT5 123 aa4.92□□□□□ -1.62
TRAF3-203ENST00000392745 KRTAP4-6Q9BYQ5 205 aa4.88□□□□□ -1.63
TRAF3-203ENST00000392745 MT4P47944 62 aa4.87□□□□□ -1.63
TRAF3-203ENST00000392745 LCE4AQ5TA78 99 aa4.85□□□□□ -1.63
TRAF3-203ENST00000392745 MT3P25713 68 aa4.84□□□□□ -1.63
TRAF3-203ENST00000392745 OBSCNQ5VST9 7968 aa4.77□□□□□ -1.65
TRAF3-203ENST00000392745 KRTAP20-2Q3LI61 65 aa4.74□□□□□ -1.65
TRAF3-203ENST00000392745 HMCN1Q96RW7 5635 aa4.72□□□□□ -1.65
TRAF3-203ENST00000392745 LCE1DQ5T752 114 aa4.72□□□□□ -1.65
TRAF3-203ENST00000392745 KRTAP5-2Q701N4 177 aa4.63□□□□□ -1.67
TRAF3-203ENST00000392745 KRTAP5-3Q6L8H2 238 aa4.56□□□□□ -1.68
TRAF3-203ENST00000392745 GPR98Q8WXG9 6306 aa4.2□□□□□ -1.74
TRAF3-203ENST00000392745 AHNAK2Q8IVF2 5795 aa4.19□□□□□ -1.74
TRAF3-203ENST00000392745 LCE1EQ5T753 118 aa4.12□□□□□ -1.75
TRAF3-203ENST00000392745 KRTAP4-11Q9BYQ6 195 aa4.05□□□□□ -1.76
TRAF3-203ENST00000392745 MUC5ACP98088 5654 aa4.02□□□□□ -1.77
TRAF3-203ENST00000392745 KRTAP5-1Q6L8H4 278 aa4.01□□□□□ -1.77
TRAF3-203ENST00000392745 KRTAP5-10Q6L8G5 202 aa3.99□□□□□ -1.77
TRAF3-203ENST00000392745 LCE1BQ5T7P3 118 aa3.97□□□□□ -1.77
TRAF3-203ENST00000392745 KRTAP5-8O75690 187 aa3.9□□□□□ -1.78
TRAF3-203ENST00000392745 KRTAP4-2Q9BYR5 136 aa3.9□□□□□ -1.78
TRAF3-203ENST00000392745 LCE1CQ5T751 118 aa3.87□□□□□ -1.79
TRAF3-203ENST00000392745 KRTAP5-7Q6L8G8 165 aa3.77□□□□□ -1.81
TRAF3-203ENST00000392745 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.63□□□□□ -1.83
TRAF3-203ENST00000392745 KRTAP21-2Q3LI59 83 aa3.52□□□□□ -1.85
TRAF3-203ENST00000392745 MUC5BQ9HC84 5762 aaPredicted RBP3.45□□□□□ -1.86
TRAF3-203ENST00000392745 KRTAP9-9Q9BYP9 154 aa3.43□□□□□ -1.86
TRAF3-203ENST00000392745 KRTAP5-11Q6L8G4 156 aa3.38□□□□□ -1.87
TRAF3-203ENST00000392745 AHNAKQ09666 5890 aaKnown RBP3.32□□□□□ -1.88
TRAF3-203ENST00000392745 KRTAP4-12Q9BQ66 201 aa3.27□□□□□ -1.89
TRAF3-203ENST00000392745 KRTAP21-1Q3LI58 79 aa3.19□□□□□ -1.9
TRAF3-203ENST00000392745 KRTAP4-4Q9BYR3 166 aa3.19□□□□□ -1.9
TRAF3-203ENST00000392745 MUC19Q7Z5P9 8384 aa3.15□□□□□ -1.9
TRAF3-203ENST00000392745 LCE1FQ5T754 118 aa2.94□□□□□ -1.94
TRAF3-203ENST00000392745 PHGR1C9JFL3 82 aa2.93□□□□□ -1.94
TRAF3-203ENST00000392745 MUC16Q8WXI7 14507 aa1.89□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 156 ms