RNA–Protein interactions for RNA: ENST00000391993.7

TRAF3IP1-202, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-202ENST00000391993 KRTAP2-3P0C7H8 128 aa5.56□□□□□ -1.52
TRAF3IP1-202ENST00000391993 KRTAP2-4Q9BYR9 128 aa5.56□□□□□ -1.52
TRAF3IP1-202ENST00000391993 KRTAP2-1Q9BYU5 128 aa5.56□□□□□ -1.52
TRAF3IP1-202ENST00000391993 MT1LQ93083 61 aa5.51□□□□□ -1.53
TRAF3IP1-202ENST00000391993 KRTAP19-7Q3SYF9 63 aa5.47□□□□□ -1.53
TRAF3IP1-202ENST00000391993 KRTAP4-9Q9BYQ8 210 aa5.46□□□□□ -1.54
TRAF3IP1-202ENST00000391993 MT1EP04732 61 aa5.4□□□□□ -1.55
TRAF3IP1-202ENST00000391993 MUC12Q9UKN1 5478 aa5.33□□□□□ -1.56
TRAF3IP1-202ENST00000391993 SYNE2Q8WXH0 6885 aaKnown RBP5.31□□□□□ -1.56
TRAF3IP1-202ENST00000391993 SPRR2FQ96RM1 72 aa5.3□□□□□ -1.56
TRAF3IP1-202ENST00000391993 PRM1P04553 51 aa5.28□□□□□ -1.56
TRAF3IP1-202ENST00000391993 LCE3DQ9BYE3 92 aa5.26□□□□□ -1.57
TRAF3IP1-202ENST00000391993 LCE2AQ5TA79 106 aaPredicted RBP5.24□□□□□ -1.57
TRAF3IP1-202ENST00000391993 LCE3EQ5T5B0 92 aa5.18□□□□□ -1.58
TRAF3IP1-202ENST00000391993 KRTAP19-4Q3LI73 84 aa5.14□□□□□ -1.59
TRAF3IP1-202ENST00000391993 MT1MQ8N339 61 aa5.1□□□□□ -1.59
TRAF3IP1-202ENST00000391993 KRTAP9-7A8MTY7 169 aa5.1□□□□□ -1.59
TRAF3IP1-202ENST00000391993 SSPOA2VEC9 5147 aa5.09□□□□□ -1.59
TRAF3IP1-202ENST00000391993 KRTAP19-3Q7Z4W3 81 aa5.08□□□□□ -1.6
TRAF3IP1-202ENST00000391993 KRTAP9-2Q9BYQ4 174 aa4.93□□□□□ -1.62
TRAF3IP1-202ENST00000391993 KRTAP19-6Q3LI70 58 aa4.89□□□□□ -1.63
TRAF3IP1-202ENST00000391993 LCE2DQ5TA82 110 aaPredicted RBP4.81□□□□□ -1.64
TRAF3IP1-202ENST00000391993 KRTAP6-1Q3LI64 71 aa4.81□□□□□ -1.64
TRAF3IP1-202ENST00000391993 MUC19Q7Z5P9 8384 aa4.76□□□□□ -1.65
TRAF3IP1-202ENST00000391993 KRTAP6-2Q3LI66 62 aa4.75□□□□□ -1.65
TRAF3IP1-202ENST00000391993 MACF1Q9UPN3 7388 aaKnown RBP4.6□□□□□ -1.67
TRAF3IP1-202ENST00000391993 SPRR2EP22531 72 aa4.59□□□□□ -1.67
TRAF3IP1-202ENST00000391993 SPRR2BP35325 72 aa4.59□□□□□ -1.67
TRAF3IP1-202ENST00000391993 SPRR2AP35326 72 aa4.59□□□□□ -1.67
TRAF3IP1-202ENST00000391993 MT1AP04731 61 aa4.58□□□□□ -1.68
TRAF3IP1-202ENST00000391993 LCE1AQ5T7P2 110 aa4.54□□□□□ -1.68
TRAF3IP1-202ENST00000391993 LCE5AQ5TCM9 118 aa4.53□□□□□ -1.68
TRAF3IP1-202ENST00000391993 KRTAP5-5Q701N2 237 aaPredicted RBP4.49□□□□□ -1.69
TRAF3IP1-202ENST00000391993 KRTAP9-6A0A140TA67 174 aa4.49□□□□□ -1.69
TRAF3IP1-202ENST00000391993 MDN1Q9NU22 5596 aa4.43□□□□□ -1.7
TRAF3IP1-202ENST00000391993 KRTAP2-2Q9BYT5 123 aa4.42□□□□□ -1.7
TRAF3IP1-202ENST00000391993 MT3P25713 68 aa4.41□□□□□ -1.7
TRAF3IP1-202ENST00000391993 KRTAP6-3Q3LI67 103 aa4.4□□□□□ -1.71
TRAF3IP1-202ENST00000391993 LCE1EQ5T753 118 aa4.39□□□□□ -1.71
TRAF3IP1-202ENST00000391993 SPRR2DP22532 72 aa4.35□□□□□ -1.71
TRAF3IP1-202ENST00000391993 KRTAP9-4Q9BYQ2 154 aa4.24□□□□□ -1.73
TRAF3IP1-202ENST00000391993 LCE1DQ5T752 114 aa4.18□□□□□ -1.74
TRAF3IP1-202ENST00000391993 LCE1BQ5T7P3 118 aa4.17□□□□□ -1.74
TRAF3IP1-202ENST00000391993 MT4P47944 62 aa4.16□□□□□ -1.74
TRAF3IP1-202ENST00000391993 KRTAP4-11Q9BYQ6 195 aa4.05□□□□□ -1.76
TRAF3IP1-202ENST00000391993 KRTAP5-9P26371 169 aa3.96□□□□□ -1.78
TRAF3IP1-202ENST00000391993 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.86□□□□□ -1.79
TRAF3IP1-202ENST00000391993 KRTAP4-6Q9BYQ5 205 aa3.73□□□□□ -1.81
TRAF3IP1-202ENST00000391993 MUC5ACP98088 5654 aa3.65□□□□□ -1.82
TRAF3IP1-202ENST00000391993 NEBP20929 6669 aa3.52□□□□□ -1.85
TRAF3IP1-202ENST00000391993 KRTAP20-2Q3LI61 65 aa3.48□□□□□ -1.85
TRAF3IP1-202ENST00000391993 KRTAP4-4Q9BYR3 166 aa3.46□□□□□ -1.86
TRAF3IP1-202ENST00000391993 LCE4AQ5TA78 99 aa3.43□□□□□ -1.86
TRAF3IP1-202ENST00000391993 HMCN1Q96RW7 5635 aa3.42□□□□□ -1.86
TRAF3IP1-202ENST00000391993 LCE1FQ5T754 118 aa3.39□□□□□ -1.87
TRAF3IP1-202ENST00000391993 KRTAP5-4Q6L8H1 288 aa3.35□□□□□ -1.87
TRAF3IP1-202ENST00000391993 KRTAP5-10Q6L8G5 202 aa3.23□□□□□ -1.89
TRAF3IP1-202ENST00000391993 KRTAP20-1Q3LI63 56 aa3.22□□□□□ -1.89
TRAF3IP1-202ENST00000391993 KRTAP5-2Q701N4 177 aa3.11□□□□□ -1.91
TRAF3IP1-202ENST00000391993 KRTAP4-12Q9BQ66 201 aa3.08□□□□□ -1.92
TRAF3IP1-202ENST00000391993 KRTAP4-2Q9BYR5 136 aa3.08□□□□□ -1.92
TRAF3IP1-202ENST00000391993 KRTAP5-3Q6L8H2 238 aa3.04□□□□□ -1.92
TRAF3IP1-202ENST00000391993 LCE1CQ5T751 118 aa3.02□□□□□ -1.93
TRAF3IP1-202ENST00000391993 GPR98Q8WXG9 6306 aa2.91□□□□□ -1.94
TRAF3IP1-202ENST00000391993 MUC5BQ9HC84 5762 aaPredicted RBP2.8□□□□□ -1.96
TRAF3IP1-202ENST00000391993 KRTAP5-1Q6L8H4 278 aa2.75□□□□□ -1.97
TRAF3IP1-202ENST00000391993 AHNAK2Q8IVF2 5795 aa2.75□□□□□ -1.97
TRAF3IP1-202ENST00000391993 KRTAP21-2Q3LI59 83 aa2.73□□□□□ -1.97
TRAF3IP1-202ENST00000391993 KRTAP21-1Q3LI58 79 aa2.72□□□□□ -1.97
TRAF3IP1-202ENST00000391993 KRTAP5-8O75690 187 aa2.61□□□□□ -1.99
TRAF3IP1-202ENST00000391993 KRTAP9-9Q9BYP9 154 aa2.55□□□□□ -2
TRAF3IP1-202ENST00000391993 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.44□□□□□ -2.02
TRAF3IP1-202ENST00000391993 KRTAP5-11Q6L8G4 156 aa2.39□□□□□ -2.03
TRAF3IP1-202ENST00000391993 KRTAP5-7Q6L8G8 165 aa2.23□□□□□ -2.05
TRAF3IP1-202ENST00000391993 AHNAKQ09666 5890 aaKnown RBP2.19□□□□□ -2.06
TRAF3IP1-202ENST00000391993 PHGR1C9JFL3 82 aa2.08□□□□□ -2.08
TRAF3IP1-202ENST00000391993 MUC16Q8WXI7 14507 aa1.54□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 52.7 ms