RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 LCE5AQ5TCM9 118 aa4.86□□□□□ -1.63
SHANK1-204ENST00000391814 MT1MQ8N339 61 aa4.84□□□□□ -1.63
SHANK1-204ENST00000391814 MT3P25713 68 aa4.82□□□□□ -1.64
SHANK1-204ENST00000391814 KRTAP4-9Q9BYQ8 210 aa4.8□□□□□ -1.64
SHANK1-204ENST00000391814 KRTAP9-6A0A140TA67 174 aa4.79□□□□□ -1.64
SHANK1-204ENST00000391814 KRTAP2-3P0C7H8 128 aa4.75□□□□□ -1.65
SHANK1-204ENST00000391814 KRTAP2-4Q9BYR9 128 aa4.75□□□□□ -1.65
SHANK1-204ENST00000391814 KRTAP2-1Q9BYU5 128 aa4.75□□□□□ -1.65
SHANK1-204ENST00000391814 KRTAP19-2Q3LHN2 52 aa4.74□□□□□ -1.65
SHANK1-204ENST00000391814 LCE1CQ5T751 118 aa4.67□□□□□ -1.66
SHANK1-204ENST00000391814 LCE1EQ5T753 118 aa4.67□□□□□ -1.66
SHANK1-204ENST00000391814 LCE1FQ5T754 118 aa4.67□□□□□ -1.66
SHANK1-204ENST00000391814 LCE1AQ5T7P2 110 aa4.67□□□□□ -1.66
SHANK1-204ENST00000391814 KMT2CQ8NEZ4 4911 aaKnown RBP4.66□□□□□ -1.66
SHANK1-204ENST00000391814 EPPK1P58107 5090 aaKnown RBP4.6□□□□□ -1.67
SHANK1-204ENST00000391814 KRTAP20-1Q3LI63 56 aa4.59□□□□□ -1.67
SHANK1-204ENST00000391814 KRTAP19-6Q3LI70 58 aa4.58□□□□□ -1.68
SHANK1-204ENST00000391814 FSIP2Q5CZC0 6907 aa4.53□□□□□ -1.68
SHANK1-204ENST00000391814 KRTAP6-2Q3LI66 62 aa4.53□□□□□ -1.68
SHANK1-204ENST00000391814 KRTAP19-7Q3SYF9 63 aa4.52□□□□□ -1.69
SHANK1-204ENST00000391814 MT1AP04731 61 aa4.5□□□□□ -1.69
SHANK1-204ENST00000391814 KRTAP9-7A8MTY7 169 aa4.49□□□□□ -1.69
SHANK1-204ENST00000391814 SYNE2Q8WXH0 6885 aaKnown RBP4.46□□□□□ -1.7
SHANK1-204ENST00000391814 ABCA13Q86UQ4 5058 aa4.45□□□□□ -1.7
SHANK1-204ENST00000391814 KRTAP9-6A8MVA2 160 aa4.44□□□□□ -1.7
SHANK1-204ENST00000391814 LCE4AQ5TA78 99 aa4.39□□□□□ -1.71
SHANK1-204ENST00000391814 LCE2AQ5TA79 106 aaPredicted RBP4.35□□□□□ -1.71
SHANK1-204ENST00000391814 KRTAP6-1Q3LI64 71 aa4.35□□□□□ -1.71
SHANK1-204ENST00000391814 FAT4Q6V0I7 4981 aa4.33□□□□□ -1.72
SHANK1-204ENST00000391814 SYNE1Q8NF91 8797 aaKnown RBP4.29□□□□□ -1.72
SHANK1-204ENST00000391814 RNF213Q63HN8 5207 aa4.26□□□□□ -1.73
SHANK1-204ENST00000391814 HMCN2Q8NDA2 5059 aa4.25□□□□□ -1.73
SHANK1-204ENST00000391814 UBR4Q5T4S7 5183 aa4.24□□□□□ -1.73
SHANK1-204ENST00000391814 MUC2Q02817 5179 aa4.23□□□□□ -1.73
SHANK1-204ENST00000391814 KRTAP9-4Q9BYQ2 154 aa4.23□□□□□ -1.73
SHANK1-204ENST00000391814 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.19□□□□□ -1.74
SHANK1-204ENST00000391814 KRTAP6-3Q3LI67 103 aa4.1□□□□□ -1.75
SHANK1-204ENST00000391814 KRTAP2-2Q9BYT5 123 aa4.05□□□□□ -1.76
SHANK1-204ENST00000391814 OBSCNQ5VST9 7968 aa4.02□□□□□ -1.77
SHANK1-204ENST00000391814 KRTAP9-9Q9BYP9 154 aa3.89□□□□□ -1.79
SHANK1-204ENST00000391814 KRTAP4-11Q9BYQ6 195 aa3.86□□□□□ -1.79
SHANK1-204ENST00000391814 KRTAP20-2Q3LI61 65 aa3.84□□□□□ -1.79
SHANK1-204ENST00000391814 USH2AO75445 5202 aa3.65□□□□□ -1.82
SHANK1-204ENST00000391814 FCGBPQ9Y6R7 5405 aaPredicted RBP3.64□□□□□ -1.83
SHANK1-204ENST00000391814 KRTAP4-4Q9BYR3 166 aa3.64□□□□□ -1.83
SHANK1-204ENST00000391814 KRTAP4-6Q9BYQ5 205 aa3.62□□□□□ -1.83
SHANK1-204ENST00000391814 KMT2DO14686 5537 aa3.6□□□□□ -1.83
SHANK1-204ENST00000391814 KRTAP4-12Q9BQ66 201 aa3.59□□□□□ -1.83
SHANK1-204ENST00000391814 KRTAP4-2Q9BYR5 136 aa3.59□□□□□ -1.83
SHANK1-204ENST00000391814 DSTQ03001 7570 aaKnown RBP3.59□□□□□ -1.83
SHANK1-204ENST00000391814 MACF1Q9UPN3 7388 aaKnown RBP3.51□□□□□ -1.85
SHANK1-204ENST00000391814 NEBP20929 6669 aa3.48□□□□□ -1.85
SHANK1-204ENST00000391814 KRTAP5-5Q701N2 237 aaPredicted RBP3.48□□□□□ -1.85
SHANK1-204ENST00000391814 SSPOA2VEC9 5147 aa3.37□□□□□ -1.87
SHANK1-204ENST00000391814 MUC19Q7Z5P9 8384 aa3.35□□□□□ -1.87
SHANK1-204ENST00000391814 KRTAP5-9P26371 169 aa3.33□□□□□ -1.88
SHANK1-204ENST00000391814 MUC12Q9UKN1 5478 aa3.2□□□□□ -1.9
SHANK1-204ENST00000391814 MDN1Q9NU22 5596 aa3.1□□□□□ -1.91
SHANK1-204ENST00000391814 KRTAP5-4Q6L8H1 288 aa3.02□□□□□ -1.93
SHANK1-204ENST00000391814 GPR98Q8WXG9 6306 aa2.89□□□□□ -1.95
SHANK1-204ENST00000391814 KRTAP5-3Q6L8H2 238 aa2.71□□□□□ -1.98
SHANK1-204ENST00000391814 PHGR1C9JFL3 82 aa2.7□□□□□ -1.98
SHANK1-204ENST00000391814 MUC5ACP98088 5654 aa2.69□□□□□ -1.98
SHANK1-204ENST00000391814 KRTAP5-10Q6L8G5 202 aa2.58□□□□□ -2
SHANK1-204ENST00000391814 KRTAP5-8O75690 187 aa2.54□□□□□ -2
SHANK1-204ENST00000391814 KRTAP5-2Q701N4 177 aa2.52□□□□□ -2.01
SHANK1-204ENST00000391814 HMCN1Q96RW7 5635 aa2.45□□□□□ -2.02
SHANK1-204ENST00000391814 AHNAK2Q8IVF2 5795 aa2.31□□□□□ -2.04
SHANK1-204ENST00000391814 KRTAP5-1Q6L8H4 278 aa2.27□□□□□ -2.05
SHANK1-204ENST00000391814 KRTAP21-1Q3LI58 79 aa2.23□□□□□ -2.05
SHANK1-204ENST00000391814 MUC5BQ9HC84 5762 aaPredicted RBP2.18□□□□□ -2.06
SHANK1-204ENST00000391814 KRTAP21-2Q3LI59 83 aa2.09□□□□□ -2.07
SHANK1-204ENST00000391814 AHNAKQ09666 5890 aaKnown RBP2.08□□□□□ -2.08
SHANK1-204ENST00000391814 KRTAP5-11Q6L8G4 156 aa2.02□□□□□ -2.09
SHANK1-204ENST00000391814 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.74□□□□□ -2.13
SHANK1-204ENST00000391814 KRTAP5-7Q6L8G8 165 aa1.73□□□□□ -2.13
SHANK1-204ENST00000391814 MUC16Q8WXI7 14507 aa1.58□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 6.4 ms