RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 SYNE2Q8WXH0 6885 aaKnown RBP4.48□□□□□ -1.69
SPTBN1-203ENST00000389980 MUC12Q9UKN1 5478 aa4.46□□□□□ -1.7
SPTBN1-203ENST00000389980 MT1EP04732 61 aa4.42□□□□□ -1.7
SPTBN1-203ENST00000389980 SPRR2FQ96RM1 72 aa4.37□□□□□ -1.71
SPTBN1-203ENST00000389980 MT1LQ93083 61 aa4.33□□□□□ -1.72
SPTBN1-203ENST00000389980 MDN1Q9NU22 5596 aa4.3□□□□□ -1.72
SPTBN1-203ENST00000389980 KRTAP4-7Q9BYR0 210 aa4.28□□□□□ -1.72
SPTBN1-203ENST00000389980 LCE3CQ5T5A8 94 aa4.27□□□□□ -1.73
SPTBN1-203ENST00000389980 KRTAP5-9P26371 169 aa4.26□□□□□ -1.73
SPTBN1-203ENST00000389980 KRTAP19-3Q7Z4W3 81 aa4.24□□□□□ -1.73
SPTBN1-203ENST00000389980 MT1GP13640 62 aa4.18□□□□□ -1.74
SPTBN1-203ENST00000389980 KRTAP6-3Q3LI67 103 aa4.17□□□□□ -1.74
SPTBN1-203ENST00000389980 LCE5AQ5TCM9 118 aa4.16□□□□□ -1.74
SPTBN1-203ENST00000389980 MT1MQ8N339 61 aa4.16□□□□□ -1.74
SPTBN1-203ENST00000389980 KRTAP4-3Q9BYR4 195 aa4.16□□□□□ -1.74
SPTBN1-203ENST00000389980 LCE1AQ5T7P2 110 aa4.15□□□□□ -1.75
SPTBN1-203ENST00000389980 KRTAP19-4Q3LI73 84 aa4.14□□□□□ -1.75
SPTBN1-203ENST00000389980 SPRR2EP22531 72 aa4.13□□□□□ -1.75
SPTBN1-203ENST00000389980 SPRR2BP35325 72 aa4.13□□□□□ -1.75
SPTBN1-203ENST00000389980 SPRR2AP35326 72 aa4.13□□□□□ -1.75
SPTBN1-203ENST00000389980 DSTQ03001 7570 aaKnown RBP4.12□□□□□ -1.75
SPTBN1-203ENST00000389980 KRTAP9-6A8MVA2 160 aa4.1□□□□□ -1.75
SPTBN1-203ENST00000389980 NEBP20929 6669 aa4.05□□□□□ -1.76
SPTBN1-203ENST00000389980 LOC100996750A0A140TA64 210 aa4.02□□□□□ -1.77
SPTBN1-203ENST00000389980 KRTAP20-1Q3LI63 56 aa3.98□□□□□ -1.77
SPTBN1-203ENST00000389980 SPRR2DP22532 72 aa3.97□□□□□ -1.77
SPTBN1-203ENST00000389980 KRTAP2-3P0C7H8 128 aa3.92□□□□□ -1.78
SPTBN1-203ENST00000389980 KRTAP2-4Q9BYR9 128 aa3.92□□□□□ -1.78
SPTBN1-203ENST00000389980 KRTAP2-1Q9BYU5 128 aa3.92□□□□□ -1.78
SPTBN1-203ENST00000389980 LCE3BQ5TA77 95 aa3.8□□□□□ -1.8
SPTBN1-203ENST00000389980 KRTAP4-6Q9BYQ5 205 aa3.77□□□□□ -1.81
SPTBN1-203ENST00000389980 KRTAP5-5Q701N2 237 aaPredicted RBP3.74□□□□□ -1.81
SPTBN1-203ENST00000389980 KRTAP6-1Q3LI64 71 aa3.68□□□□□ -1.82
SPTBN1-203ENST00000389980 SYNE1Q8NF91 8797 aaKnown RBP3.66□□□□□ -1.82
SPTBN1-203ENST00000389980 MT1AP04731 61 aa3.66□□□□□ -1.82
SPTBN1-203ENST00000389980 KRTAP2-2Q9BYT5 123 aa3.63□□□□□ -1.83
SPTBN1-203ENST00000389980 GPR98Q8WXG9 6306 aa3.63□□□□□ -1.83
SPTBN1-203ENST00000389980 KRTAP5-4Q6L8H1 288 aa3.55□□□□□ -1.84
SPTBN1-203ENST00000389980 MT4P47944 62 aa3.49□□□□□ -1.85
SPTBN1-203ENST00000389980 KRTAP9-4Q9BYQ2 154 aa3.49□□□□□ -1.85
SPTBN1-203ENST00000389980 KRTAP12-4P60329 112 aa3.48□□□□□ -1.85
SPTBN1-203ENST00000389980 KRTAP4-9Q9BYQ8 210 aa3.47□□□□□ -1.85
SPTBN1-203ENST00000389980 LCE4AQ5TA78 99 aa3.46□□□□□ -1.85
SPTBN1-203ENST00000389980 HMCN1Q96RW7 5635 aa3.44□□□□□ -1.86
SPTBN1-203ENST00000389980 LCE1DQ5T752 114 aa3.4□□□□□ -1.87
SPTBN1-203ENST00000389980 KRTAP6-2Q3LI66 62 aa3.39□□□□□ -1.87
SPTBN1-203ENST00000389980 KRTAP20-2Q3LI61 65 aa3.35□□□□□ -1.87
SPTBN1-203ENST00000389980 MT3P25713 68 aa3.31□□□□□ -1.88
SPTBN1-203ENST00000389980 OBSCNQ5VST9 7968 aa3.28□□□□□ -1.88
SPTBN1-203ENST00000389980 KRTAP5-2Q701N4 177 aa3.22□□□□□ -1.89
SPTBN1-203ENST00000389980 KRTAP5-3Q6L8H2 238 aa3.22□□□□□ -1.89
SPTBN1-203ENST00000389980 LCE3DQ9BYE3 92 aa3.21□□□□□ -1.9
SPTBN1-203ENST00000389980 KRTAP5-10Q6L8G5 202 aa3.17□□□□□ -1.9
SPTBN1-203ENST00000389980 LCE3EQ5T5B0 92 aa3.15□□□□□ -1.9
SPTBN1-203ENST00000389980 AHNAK2Q8IVF2 5795 aa3.14□□□□□ -1.91
SPTBN1-203ENST00000389980 KRTAP9-9Q9BYP9 154 aa3.13□□□□□ -1.91
SPTBN1-203ENST00000389980 KRTAP5-7Q6L8G8 165 aa3.12□□□□□ -1.91
SPTBN1-203ENST00000389980 PRM1P04553 51 aa3.09□□□□□ -1.91
SPTBN1-203ENST00000389980 KRTAP4-12Q9BQ66 201 aa3.03□□□□□ -1.92
SPTBN1-203ENST00000389980 KRTAP4-2Q9BYR5 136 aa2.93□□□□□ -1.94
SPTBN1-203ENST00000389980 LCE1FQ5T754 118 aa2.91□□□□□ -1.94
SPTBN1-203ENST00000389980 KRTAP4-11Q9BYQ6 195 aa2.9□□□□□ -1.94
SPTBN1-203ENST00000389980 LCE1EQ5T753 118 aa2.84□□□□□ -1.96
SPTBN1-203ENST00000389980 KRTAP5-1Q6L8H4 278 aa2.81□□□□□ -1.96
SPTBN1-203ENST00000389980 KRTAP5-8O75690 187 aa2.8□□□□□ -1.96
SPTBN1-203ENST00000389980 AHNAKQ09666 5890 aaKnown RBP2.78□□□□□ -1.96
SPTBN1-203ENST00000389980 MUC5ACP98088 5654 aa2.77□□□□□ -1.97
SPTBN1-203ENST00000389980 LCE1BQ5T7P3 118 aa2.76□□□□□ -1.97
SPTBN1-203ENST00000389980 LCE1CQ5T751 118 aa2.66□□□□□ -1.98
SPTBN1-203ENST00000389980 MUC5BQ9HC84 5762 aaPredicted RBP2.65□□□□□ -1.99
SPTBN1-203ENST00000389980 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.47□□□□□ -2.01
SPTBN1-203ENST00000389980 KRTAP21-2Q3LI59 83 aa2.39□□□□□ -2.03
SPTBN1-203ENST00000389980 KRTAP5-11Q6L8G4 156 aa2.34□□□□□ -2.03
SPTBN1-203ENST00000389980 KRTAP4-4Q9BYR3 166 aa2.2□□□□□ -2.06
SPTBN1-203ENST00000389980 KRTAP21-1Q3LI58 79 aa2.07□□□□□ -2.08
SPTBN1-203ENST00000389980 PHGR1C9JFL3 82 aa2.03□□□□□ -2.08
SPTBN1-203ENST00000389980 MUC19Q7Z5P9 8384 aa1.96□□□□□ -2.1
SPTBN1-203ENST00000389980 MUC16Q8WXI7 14507 aa1.31□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 13.1 ms