RNA–Protein interactions for RNA: ENST00000389547.7

PPFIA1-202, Transcript of PTPRF interacting protein alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPFIA1, Length 4,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-202ENST00000389547 MT1LQ93083 61 aa6.34□□□□□ -1.39
PPFIA1-202ENST00000389547 SPRR2EP22531 72 aa6.31□□□□□ -1.4
PPFIA1-202ENST00000389547 SPRR2BP35325 72 aa6.31□□□□□ -1.4
PPFIA1-202ENST00000389547 SPRR2AP35326 72 aa6.31□□□□□ -1.4
PPFIA1-202ENST00000389547 SYNE1Q8NF91 8797 aaKnown RBP6.31□□□□□ -1.4
PPFIA1-202ENST00000389547 MT1GP13640 62 aa6.31□□□□□ -1.4
PPFIA1-202ENST00000389547 FCGBPQ9Y6R7 5405 aaPredicted RBP6.3□□□□□ -1.4
PPFIA1-202ENST00000389547 OBSCNQ5VST9 7968 aa6.26□□□□□ -1.41
PPFIA1-202ENST00000389547 KRTAP19-3Q7Z4W3 81 aa6.24□□□□□ -1.41
PPFIA1-202ENST00000389547 MUC12Q9UKN1 5478 aa6.23□□□□□ -1.41
PPFIA1-202ENST00000389547 KRTAP4-3Q9BYR4 195 aa6.22□□□□□ -1.41
PPFIA1-202ENST00000389547 KRTAP9-6A8MVA2 160 aa6.19□□□□□ -1.42
PPFIA1-202ENST00000389547 MACF1Q9UPN3 7388 aaKnown RBP6.18□□□□□ -1.42
PPFIA1-202ENST00000389547 SYNE2Q8WXH0 6885 aaKnown RBP6.17□□□□□ -1.42
PPFIA1-202ENST00000389547 KRTAP19-4Q3LI73 84 aa6.15□□□□□ -1.42
PPFIA1-202ENST00000389547 KRTAP2-3P0C7H8 128 aa6.14□□□□□ -1.43
PPFIA1-202ENST00000389547 KRTAP2-4Q9BYR9 128 aa6.14□□□□□ -1.43
PPFIA1-202ENST00000389547 KRTAP2-1Q9BYU5 128 aa6.14□□□□□ -1.43
PPFIA1-202ENST00000389547 MT1MQ8N339 61 aa6.09□□□□□ -1.44
PPFIA1-202ENST00000389547 LOC100996750A0A140TA64 210 aa6.08□□□□□ -1.44
PPFIA1-202ENST00000389547 LCE3BQ5TA77 95 aa6.07□□□□□ -1.44
PPFIA1-202ENST00000389547 SPRR2DP22532 72 aa6.06□□□□□ -1.44
PPFIA1-202ENST00000389547 KRTAP9-6A0A140TA67 174 aa6.04□□□□□ -1.44
PPFIA1-202ENST00000389547 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.81□□□□□ -1.48
PPFIA1-202ENST00000389547 LCE3DQ9BYE3 92 aa5.78□□□□□ -1.48
PPFIA1-202ENST00000389547 LCE5AQ5TCM9 118 aa5.75□□□□□ -1.49
PPFIA1-202ENST00000389547 LCE1AQ5T7P2 110 aa5.74□□□□□ -1.49
PPFIA1-202ENST00000389547 PRM1P04553 51 aa5.74□□□□□ -1.49
PPFIA1-202ENST00000389547 LCE3EQ5T5B0 92 aa5.73□□□□□ -1.49
PPFIA1-202ENST00000389547 KRTAP4-9Q9BYQ8 210 aa5.71□□□□□ -1.5
PPFIA1-202ENST00000389547 KRTAP9-7A8MTY7 169 aa5.68□□□□□ -1.5
PPFIA1-202ENST00000389547 MDN1Q9NU22 5596 aa5.67□□□□□ -1.5
PPFIA1-202ENST00000389547 KRTAP6-3Q3LI67 103 aa5.63□□□□□ -1.51
PPFIA1-202ENST00000389547 MT4P47944 62 aa5.5□□□□□ -1.53
PPFIA1-202ENST00000389547 KRTAP5-9P26371 169 aa5.46□□□□□ -1.54
PPFIA1-202ENST00000389547 KRTAP6-1Q3LI64 71 aa5.42□□□□□ -1.54
PPFIA1-202ENST00000389547 MT1AP04731 61 aa5.41□□□□□ -1.54
PPFIA1-202ENST00000389547 MT3P25713 68 aa5.22□□□□□ -1.57
PPFIA1-202ENST00000389547 KRTAP6-2Q3LI66 62 aa5.16□□□□□ -1.58
PPFIA1-202ENST00000389547 KRTAP20-1Q3LI63 56 aa5.15□□□□□ -1.59
PPFIA1-202ENST00000389547 NEBP20929 6669 aa5.09□□□□□ -1.59
PPFIA1-202ENST00000389547 KRTAP9-4Q9BYQ2 154 aa5.06□□□□□ -1.6
PPFIA1-202ENST00000389547 KRTAP2-2Q9BYT5 123 aa5.05□□□□□ -1.6
PPFIA1-202ENST00000389547 KRTAP4-6Q9BYQ5 205 aa4.91□□□□□ -1.62
PPFIA1-202ENST00000389547 LCE4AQ5TA78 99 aa4.9□□□□□ -1.63
PPFIA1-202ENST00000389547 LCE1DQ5T752 114 aa4.88□□□□□ -1.63
PPFIA1-202ENST00000389547 KRTAP5-5Q701N2 237 aaPredicted RBP4.84□□□□□ -1.64
PPFIA1-202ENST00000389547 LCE1BQ5T7P3 118 aa4.78□□□□□ -1.64
PPFIA1-202ENST00000389547 LCE1EQ5T753 118 aa4.66□□□□□ -1.66
PPFIA1-202ENST00000389547 KRTAP20-2Q3LI61 65 aa4.65□□□□□ -1.67
PPFIA1-202ENST00000389547 MUC19Q7Z5P9 8384 aa4.55□□□□□ -1.68
PPFIA1-202ENST00000389547 HMCN1Q96RW7 5635 aa4.46□□□□□ -1.7
PPFIA1-202ENST00000389547 KRTAP5-4Q6L8H1 288 aa4.45□□□□□ -1.7
PPFIA1-202ENST00000389547 KRTAP4-11Q9BYQ6 195 aa4.31□□□□□ -1.72
PPFIA1-202ENST00000389547 MUC5ACP98088 5654 aa4.27□□□□□ -1.73
PPFIA1-202ENST00000389547 GPR98Q8WXG9 6306 aa4.21□□□□□ -1.74
PPFIA1-202ENST00000389547 KRTAP5-3Q6L8H2 238 aa4.03□□□□□ -1.76
PPFIA1-202ENST00000389547 KRTAP5-2Q701N4 177 aa3.99□□□□□ -1.77
PPFIA1-202ENST00000389547 KRTAP9-9Q9BYP9 154 aa3.88□□□□□ -1.79
PPFIA1-202ENST00000389547 AHNAK2Q8IVF2 5795 aa3.86□□□□□ -1.79
PPFIA1-202ENST00000389547 KRTAP4-12Q9BQ66 201 aa3.75□□□□□ -1.81
PPFIA1-202ENST00000389547 KRTAP4-2Q9BYR5 136 aa3.75□□□□□ -1.81
PPFIA1-202ENST00000389547 LCE1CQ5T751 118 aa3.7□□□□□ -1.82
PPFIA1-202ENST00000389547 LCE1FQ5T754 118 aa3.7□□□□□ -1.82
PPFIA1-202ENST00000389547 KRTAP5-8O75690 187 aa3.69□□□□□ -1.82
PPFIA1-202ENST00000389547 KRTAP4-4Q9BYR3 166 aa3.69□□□□□ -1.82
PPFIA1-202ENST00000389547 KRTAP5-1Q6L8H4 278 aa3.58□□□□□ -1.84
PPFIA1-202ENST00000389547 MUC5BQ9HC84 5762 aaPredicted RBP3.54□□□□□ -1.84
PPFIA1-202ENST00000389547 KRTAP5-10Q6L8G5 202 aa3.51□□□□□ -1.85
PPFIA1-202ENST00000389547 KRTAP21-2Q3LI59 83 aa3.2□□□□□ -1.9
PPFIA1-202ENST00000389547 AHNAKQ09666 5890 aaKnown RBP3.16□□□□□ -1.9
PPFIA1-202ENST00000389547 KRTAP5-11Q6L8G4 156 aa3.12□□□□□ -1.91
PPFIA1-202ENST00000389547 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.04□□□□□ -1.92
PPFIA1-202ENST00000389547 KRTAP21-1Q3LI58 79 aa3.04□□□□□ -1.92
PPFIA1-202ENST00000389547 KRTAP5-7Q6L8G8 165 aa3.04□□□□□ -1.92
PPFIA1-202ENST00000389547 PHGR1C9JFL3 82 aa2.69□□□□□ -1.98
PPFIA1-202ENST00000389547 MUC16Q8WXI7 14507 aa1.78□□□□□ -2.12
Retrieved 77 of 20,778 RNA–protein pairs in 14.3 ms