RNA–Protein interactions for RNA: ENST00000389005.5

NCBP3-201, Transcript of nuclear cap binding subunit 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NCBP3, Length 12,770 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-201ENST00000389005 SYNE1Q8NF91 8797 aaKnown RBP2.52□□□□□ -2.01
NCBP3-201ENST00000389005 HMCN2Q8NDA2 5059 aa2.5□□□□□ -2.01
NCBP3-201ENST00000389005 MT1MQ8N339 61 aa2.5□□□□□ -2.01
NCBP3-201ENST00000389005 SPRR2DP22532 72 aa2.49□□□□□ -2.01
NCBP3-201ENST00000389005 LOC100996750A0A140TA64 210 aa2.47□□□□□ -2.01
NCBP3-201ENST00000389005 KRTAP19-7Q3SYF9 63 aa2.46□□□□□ -2.01
NCBP3-201ENST00000389005 KRTAP2-3P0C7H8 128 aa2.46□□□□□ -2.02
NCBP3-201ENST00000389005 KRTAP2-4Q9BYR9 128 aa2.46□□□□□ -2.02
NCBP3-201ENST00000389005 KRTAP2-1Q9BYU5 128 aa2.46□□□□□ -2.02
NCBP3-201ENST00000389005 KRTAP4-3Q9BYR4 195 aa2.44□□□□□ -2.02
NCBP3-201ENST00000389005 MUC2Q02817 5179 aa2.44□□□□□ -2.02
NCBP3-201ENST00000389005 PRM1P04553 51 aa2.41□□□□□ -2.02
NCBP3-201ENST00000389005 KRTAP19-6Q3LI70 58 aa2.4□□□□□ -2.02
NCBP3-201ENST00000389005 FSIP2Q5CZC0 6907 aa2.4□□□□□ -2.03
NCBP3-201ENST00000389005 USH2AO75445 5202 aa2.37□□□□□ -2.03
NCBP3-201ENST00000389005 KRTAP9-6A8MVA2 160 aa2.37□□□□□ -2.03
NCBP3-201ENST00000389005 LCE2AQ5TA79 106 aaPredicted RBP2.33□□□□□ -2.04
NCBP3-201ENST00000389005 MT1AP04731 61 aa2.33□□□□□ -2.04
NCBP3-201ENST00000389005 KRTAP4-9Q9BYQ8 210 aa2.32□□□□□ -2.04
NCBP3-201ENST00000389005 OBSCNQ5VST9 7968 aa2.23□□□□□ -2.05
NCBP3-201ENST00000389005 FCGBPQ9Y6R7 5405 aaPredicted RBP2.22□□□□□ -2.05
NCBP3-201ENST00000389005 MT4P47944 62 aa2.22□□□□□ -2.05
NCBP3-201ENST00000389005 KRTAP6-1Q3LI64 71 aa2.22□□□□□ -2.05
NCBP3-201ENST00000389005 LCE1AQ5T7P2 110 aa2.2□□□□□ -2.06
NCBP3-201ENST00000389005 LCE1DQ5T752 114 aa2.19□□□□□ -2.06
NCBP3-201ENST00000389005 LCE5AQ5TCM9 118 aa2.19□□□□□ -2.06
NCBP3-201ENST00000389005 LCE1BQ5T7P3 118 aa2.17□□□□□ -2.06
NCBP3-201ENST00000389005 KRTAP9-2Q9BYQ4 174 aa2.17□□□□□ -2.06
NCBP3-201ENST00000389005 KRTAP6-2Q3LI66 62 aa2.16□□□□□ -2.06
NCBP3-201ENST00000389005 KMT2DO14686 5537 aa2.15□□□□□ -2.07
NCBP3-201ENST00000389005 KRTAP9-7A8MTY7 169 aa2.13□□□□□ -2.07
NCBP3-201ENST00000389005 SYNE2Q8WXH0 6885 aaKnown RBP2.12□□□□□ -2.07
NCBP3-201ENST00000389005 KRTAP9-4Q9BYQ2 154 aa2.1□□□□□ -2.07
NCBP3-201ENST00000389005 LCE4AQ5TA78 99 aa2.1□□□□□ -2.07
NCBP3-201ENST00000389005 DSTQ03001 7570 aaKnown RBP2.07□□□□□ -2.08
NCBP3-201ENST00000389005 MUC12Q9UKN1 5478 aa2.07□□□□□ -2.08
NCBP3-201ENST00000389005 SSPOA2VEC9 5147 aa2.03□□□□□ -2.08
NCBP3-201ENST00000389005 KRTAP6-3Q3LI67 103 aa1.98□□□□□ -2.09
NCBP3-201ENST00000389005 KRTAP9-6A0A140TA67 174 aa1.98□□□□□ -2.09
NCBP3-201ENST00000389005 MDN1Q9NU22 5596 aa1.97□□□□□ -2.09
NCBP3-201ENST00000389005 KRTAP20-1Q3LI63 56 aa1.97□□□□□ -2.09
NCBP3-201ENST00000389005 GPR98Q8WXG9 6306 aa1.97□□□□□ -2.09
NCBP3-201ENST00000389005 NEBP20929 6669 aa1.96□□□□□ -2.1
NCBP3-201ENST00000389005 KRTAP2-2Q9BYT5 123 aa1.96□□□□□ -2.1
NCBP3-201ENST00000389005 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.9□□□□□ -2.1
NCBP3-201ENST00000389005 MACF1Q9UPN3 7388 aaKnown RBP1.9□□□□□ -2.11
NCBP3-201ENST00000389005 KRTAP5-9P26371 169 aa1.82□□□□□ -2.12
NCBP3-201ENST00000389005 KRTAP9-9Q9BYP9 154 aa1.82□□□□□ -2.12
NCBP3-201ENST00000389005 KRTAP5-5Q701N2 237 aaPredicted RBP1.8□□□□□ -2.12
NCBP3-201ENST00000389005 AHNAK2Q8IVF2 5795 aa1.8□□□□□ -2.12
NCBP3-201ENST00000389005 KRTAP4-11Q9BYQ6 195 aa1.77□□□□□ -2.13
NCBP3-201ENST00000389005 LCE1CQ5T751 118 aa1.76□□□□□ -2.13
NCBP3-201ENST00000389005 LCE1EQ5T753 118 aa1.76□□□□□ -2.13
NCBP3-201ENST00000389005 LCE1FQ5T754 118 aa1.76□□□□□ -2.13
NCBP3-201ENST00000389005 MUC19Q7Z5P9 8384 aa1.76□□□□□ -2.13
NCBP3-201ENST00000389005 KRTAP4-6Q9BYQ5 205 aa1.74□□□□□ -2.13
NCBP3-201ENST00000389005 KRTAP20-2Q3LI61 65 aa1.72□□□□□ -2.13
NCBP3-201ENST00000389005 HMCN1Q96RW7 5635 aa1.7□□□□□ -2.14
NCBP3-201ENST00000389005 MUC5ACP98088 5654 aa1.65□□□□□ -2.15
NCBP3-201ENST00000389005 KRTAP4-4Q9BYR3 166 aa1.58□□□□□ -2.16
NCBP3-201ENST00000389005 KRTAP5-4Q6L8H1 288 aa1.57□□□□□ -2.16
NCBP3-201ENST00000389005 AHNAKQ09666 5890 aaKnown RBP1.55□□□□□ -2.16
NCBP3-201ENST00000389005 KRTAP4-12Q9BQ66 201 aa1.49□□□□□ -2.17
NCBP3-201ENST00000389005 KRTAP4-2Q9BYR5 136 aa1.49□□□□□ -2.17
NCBP3-201ENST00000389005 KRTAP5-10Q6L8G5 202 aa1.38□□□□□ -2.19
NCBP3-201ENST00000389005 KRTAP5-3Q6L8H2 238 aa1.37□□□□□ -2.19
NCBP3-201ENST00000389005 KRTAP5-2Q701N4 177 aa1.34□□□□□ -2.19
NCBP3-201ENST00000389005 MUC5BQ9HC84 5762 aaPredicted RBP1.34□□□□□ -2.2
NCBP3-201ENST00000389005 KRTAP5-8O75690 187 aa1.23□□□□□ -2.21
NCBP3-201ENST00000389005 KRTAP5-1Q6L8H4 278 aa1.2□□□□□ -2.22
NCBP3-201ENST00000389005 KRTAP21-2Q3LI59 83 aa1.18□□□□□ -2.22
NCBP3-201ENST00000389005 KRTAP5-11Q6L8G4 156 aa1.18□□□□□ -2.22
NCBP3-201ENST00000389005 PHGR1C9JFL3 82 aa1.12□□□□□ -2.23
NCBP3-201ENST00000389005 KRTAP21-1Q3LI58 79 aa1.12□□□□□ -2.23
NCBP3-201ENST00000389005 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.09□□□□□ -2.23
NCBP3-201ENST00000389005 KRTAP5-7Q6L8G8 165 aa0.93□□□□□ -2.26
NCBP3-201ENST00000389005 MUC16Q8WXI7 14507 aa0.73□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 11 ms