RNA–Protein interactions for RNA: ENST00000381810.7

LITAF-202, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-202ENST00000381810 KRTAP19-4Q3LI73 84 aa5.99□□□□□ -1.45
LITAF-202ENST00000381810 MACF1Q9UPN3 7388 aaKnown RBP5.95□□□□□ -1.46
LITAF-202ENST00000381810 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.94□□□□□ -1.46
LITAF-202ENST00000381810 KRTAP4-7Q9BYR0 210 aa5.84□□□□□ -1.47
LITAF-202ENST00000381810 SYNE2Q8WXH0 6885 aaKnown RBP5.84□□□□□ -1.47
LITAF-202ENST00000381810 SPRR2FQ96RM1 72 aa5.83□□□□□ -1.48
LITAF-202ENST00000381810 KRTAP19-3Q7Z4W3 81 aa5.81□□□□□ -1.48
LITAF-202ENST00000381810 MT1GP13640 62 aa5.77□□□□□ -1.49
LITAF-202ENST00000381810 KRTAP9-7A8MTY7 169 aa5.74□□□□□ -1.49
LITAF-202ENST00000381810 MT1MQ8N339 61 aa5.73□□□□□ -1.49
LITAF-202ENST00000381810 KRTAP9-6A8MVA2 160 aa5.72□□□□□ -1.49
LITAF-202ENST00000381810 KRTAP5-9P26371 169 aa5.69□□□□□ -1.5
LITAF-202ENST00000381810 LCE5AQ5TCM9 118 aa5.68□□□□□ -1.5
LITAF-202ENST00000381810 KRTAP6-3Q3LI67 103 aa5.64□□□□□ -1.51
LITAF-202ENST00000381810 KRTAP4-3Q9BYR4 195 aa5.64□□□□□ -1.51
LITAF-202ENST00000381810 MUC12Q9UKN1 5478 aa5.63□□□□□ -1.51
LITAF-202ENST00000381810 LCE1AQ5T7P2 110 aa5.55□□□□□ -1.52
LITAF-202ENST00000381810 MDN1Q9NU22 5596 aa5.54□□□□□ -1.52
LITAF-202ENST00000381810 SPRR2EP22531 72 aa5.49□□□□□ -1.53
LITAF-202ENST00000381810 SPRR2BP35325 72 aa5.49□□□□□ -1.53
LITAF-202ENST00000381810 SPRR2AP35326 72 aa5.49□□□□□ -1.53
LITAF-202ENST00000381810 KRTAP2-3P0C7H8 128 aa5.37□□□□□ -1.55
LITAF-202ENST00000381810 KRTAP2-4Q9BYR9 128 aa5.37□□□□□ -1.55
LITAF-202ENST00000381810 KRTAP2-1Q9BYU5 128 aa5.37□□□□□ -1.55
LITAF-202ENST00000381810 NEBP20929 6669 aa5.37□□□□□ -1.55
LITAF-202ENST00000381810 SPRR2DP22532 72 aa5.28□□□□□ -1.56
LITAF-202ENST00000381810 KRTAP5-3Q6L8H2 238 aa5.28□□□□□ -1.56
LITAF-202ENST00000381810 LCE3BQ5TA77 95 aa5.26□□□□□ -1.57
LITAF-202ENST00000381810 KRTAP9-9Q9BYP9 154 aa5.22□□□□□ -1.57
LITAF-202ENST00000381810 KRTAP9-4Q9BYQ2 154 aa5.22□□□□□ -1.57
LITAF-202ENST00000381810 LCE4AQ5TA78 99 aa5.15□□□□□ -1.58
LITAF-202ENST00000381810 KRTAP5-5Q701N2 237 aaPredicted RBP5.13□□□□□ -1.59
LITAF-202ENST00000381810 DSTQ03001 7570 aaKnown RBP5.12□□□□□ -1.59
LITAF-202ENST00000381810 MT1AP04731 61 aa5.1□□□□□ -1.59
LITAF-202ENST00000381810 KRTAP4-12Q9BQ66 201 aa5.09□□□□□ -1.59
LITAF-202ENST00000381810 INE1O15225 51 aa5.07□□□□□ -1.6
LITAF-202ENST00000381810 KRTAP20-1Q3LI63 56 aa5.05□□□□□ -1.6
LITAF-202ENST00000381810 KRTAP6-1Q3LI64 71 aa5.05□□□□□ -1.6
LITAF-202ENST00000381810 KRTAP4-2Q9BYR5 136 aa5.04□□□□□ -1.6
LITAF-202ENST00000381810 LCE1DQ5T752 114 aa4.91□□□□□ -1.62
LITAF-202ENST00000381810 KRTAP4-9Q9BYQ8 210 aa4.89□□□□□ -1.63
LITAF-202ENST00000381810 KRTAP2-2Q9BYT5 123 aa4.87□□□□□ -1.63
LITAF-202ENST00000381810 KRTAP5-4Q6L8H1 288 aa4.81□□□□□ -1.64
LITAF-202ENST00000381810 SYNE1Q8NF91 8797 aaKnown RBP4.76□□□□□ -1.65
LITAF-202ENST00000381810 KRTAP12-4P60329 112 aa4.72□□□□□ -1.65
LITAF-202ENST00000381810 KRTAP6-2Q3LI66 62 aa4.62□□□□□ -1.67
LITAF-202ENST00000381810 MT3P25713 68 aa4.61□□□□□ -1.67
LITAF-202ENST00000381810 MT4P47944 62 aa4.58□□□□□ -1.68
LITAF-202ENST00000381810 LCE3DQ9BYE3 92 aa4.56□□□□□ -1.68
LITAF-202ENST00000381810 KRTAP4-11Q9BYQ6 195 aa4.54□□□□□ -1.68
LITAF-202ENST00000381810 KRTAP20-2Q3LI61 65 aa4.49□□□□□ -1.69
LITAF-202ENST00000381810 HMCN1Q96RW7 5635 aa4.48□□□□□ -1.69
LITAF-202ENST00000381810 LCE3EQ5T5B0 92 aa4.46□□□□□ -1.7
LITAF-202ENST00000381810 KRTAP5-2Q701N4 177 aa4.41□□□□□ -1.7
LITAF-202ENST00000381810 AHNAK2Q8IVF2 5795 aa4.1□□□□□ -1.75
LITAF-202ENST00000381810 OBSCNQ5VST9 7968 aa4.09□□□□□ -1.75
LITAF-202ENST00000381810 GPR98Q8WXG9 6306 aa4.01□□□□□ -1.77
LITAF-202ENST00000381810 PRM1P04553 51 aa3.99□□□□□ -1.77
LITAF-202ENST00000381810 LCE1EQ5T753 118 aa3.95□□□□□ -1.78
LITAF-202ENST00000381810 KRTAP5-10Q6L8G5 202 aa3.95□□□□□ -1.78
LITAF-202ENST00000381810 LCE1FQ5T754 118 aa3.88□□□□□ -1.79
LITAF-202ENST00000381810 KRTAP5-1Q6L8H4 278 aa3.77□□□□□ -1.81
LITAF-202ENST00000381810 LCE1BQ5T7P3 118 aa3.73□□□□□ -1.81
LITAF-202ENST00000381810 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.71□□□□□ -1.82
LITAF-202ENST00000381810 KRTAP5-7Q6L8G8 165 aa3.7□□□□□ -1.82
LITAF-202ENST00000381810 KRTAP5-8O75690 187 aa3.7□□□□□ -1.82
LITAF-202ENST00000381810 LCE1CQ5T751 118 aa3.67□□□□□ -1.82
LITAF-202ENST00000381810 MUC5ACP98088 5654 aa3.64□□□□□ -1.83
LITAF-202ENST00000381810 MUC5BQ9HC84 5762 aaPredicted RBP3.37□□□□□ -1.87
LITAF-202ENST00000381810 KRTAP21-2Q3LI59 83 aa3.3□□□□□ -1.88
LITAF-202ENST00000381810 AHNAKQ09666 5890 aaKnown RBP3.23□□□□□ -1.89
LITAF-202ENST00000381810 KRTAP5-11Q6L8G4 156 aa3.23□□□□□ -1.89
LITAF-202ENST00000381810 KRTAP4-4Q9BYR3 166 aa3.06□□□□□ -1.92
LITAF-202ENST00000381810 PHGR1C9JFL3 82 aa2.77□□□□□ -1.97
LITAF-202ENST00000381810 KRTAP21-1Q3LI58 79 aa2.46□□□□□ -2.02
LITAF-202ENST00000381810 MUC19Q7Z5P9 8384 aa2.34□□□□□ -2.03
LITAF-202ENST00000381810 MUC16Q8WXI7 14507 aa1.79□□□□□ -2.12
Retrieved 77 of 20,778 RNA–protein pairs in 7.3 ms