RNA–Protein interactions for RNA: ENST00000381410.4

SNX18-203, Transcript of sorting nexin 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX18, Length 5,218 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18-203ENST00000381410 FAT4Q6V0I7 4981 aa6.21□□□□□ -1.42
SNX18-203ENST00000381410 RNF213Q63HN8 5207 aa6.21□□□□□ -1.42
SNX18-203ENST00000381410 SYNE1Q8NF91 8797 aaKnown RBP6.2□□□□□ -1.42
SNX18-203ENST00000381410 MT3P25713 68 aa6.2□□□□□ -1.42
SNX18-203ENST00000381410 KRTAP9-2Q9BYQ4 174 aa6.16□□□□□ -1.42
SNX18-203ENST00000381410 UBR4Q5T4S7 5183 aa6.16□□□□□ -1.42
SNX18-203ENST00000381410 KRTAP19-7Q3SYF9 63 aa6.13□□□□□ -1.43
SNX18-203ENST00000381410 LOC100996750A0A140TA64 210 aa6.12□□□□□ -1.43
SNX18-203ENST00000381410 KRTAP4-3Q9BYR4 195 aa6.1□□□□□ -1.43
SNX18-203ENST00000381410 HMCN2Q8NDA2 5059 aa6.08□□□□□ -1.44
SNX18-203ENST00000381410 FSIP2Q5CZC0 6907 aa6.01□□□□□ -1.45
SNX18-203ENST00000381410 MT4P47944 62 aa6.01□□□□□ -1.45
SNX18-203ENST00000381410 MT1AP04731 61 aa5.93□□□□□ -1.46
SNX18-203ENST00000381410 PRM1P04553 51 aa5.91□□□□□ -1.46
SNX18-203ENST00000381410 MUC2Q02817 5179 aa5.83□□□□□ -1.48
SNX18-203ENST00000381410 KRTAP2-3P0C7H8 128 aa5.83□□□□□ -1.48
SNX18-203ENST00000381410 KRTAP2-4Q9BYR9 128 aa5.83□□□□□ -1.48
SNX18-203ENST00000381410 KRTAP2-1Q9BYU5 128 aa5.83□□□□□ -1.48
SNX18-203ENST00000381410 KRTAP9-6A0A140TA67 174 aa5.78□□□□□ -1.48
SNX18-203ENST00000381410 LCE1DQ5T752 114 aa5.76□□□□□ -1.49
SNX18-203ENST00000381410 LCE1BQ5T7P3 118 aa5.75□□□□□ -1.49
SNX18-203ENST00000381410 LCE1AQ5T7P2 110 aa5.72□□□□□ -1.49
SNX18-203ENST00000381410 KRTAP4-9Q9BYQ8 210 aa5.65□□□□□ -1.5
SNX18-203ENST00000381410 OBSCNQ5VST9 7968 aa5.6□□□□□ -1.51
SNX18-203ENST00000381410 KRTAP6-3Q3LI67 103 aa5.59□□□□□ -1.52
SNX18-203ENST00000381410 KRTAP9-6A8MVA2 160 aa5.58□□□□□ -1.52
SNX18-203ENST00000381410 LCE5AQ5TCM9 118 aa5.58□□□□□ -1.52
SNX18-203ENST00000381410 KRTAP6-1Q3LI64 71 aa5.53□□□□□ -1.52
SNX18-203ENST00000381410 SYNE2Q8WXH0 6885 aaKnown RBP5.52□□□□□ -1.53
SNX18-203ENST00000381410 KRTAP20-1Q3LI63 56 aa5.5□□□□□ -1.53
SNX18-203ENST00000381410 KRTAP9-7A8MTY7 169 aa5.49□□□□□ -1.53
SNX18-203ENST00000381410 KRTAP9-4Q9BYQ2 154 aa5.45□□□□□ -1.54
SNX18-203ENST00000381410 KRTAP6-2Q3LI66 62 aa5.43□□□□□ -1.54
SNX18-203ENST00000381410 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.37□□□□□ -1.55
SNX18-203ENST00000381410 LCE4AQ5TA78 99 aa5.37□□□□□ -1.55
SNX18-203ENST00000381410 USH2AO75445 5202 aa5.26□□□□□ -1.57
SNX18-203ENST00000381410 KRTAP2-2Q9BYT5 123 aa5.23□□□□□ -1.57
SNX18-203ENST00000381410 FCGBPQ9Y6R7 5405 aaPredicted RBP5.19□□□□□ -1.58
SNX18-203ENST00000381410 DSTQ03001 7570 aaKnown RBP5.01□□□□□ -1.61
SNX18-203ENST00000381410 KMT2DO14686 5537 aa4.87□□□□□ -1.63
SNX18-203ENST00000381410 KRTAP5-9P26371 169 aa4.87□□□□□ -1.63
SNX18-203ENST00000381410 LCE1CQ5T751 118 aa4.82□□□□□ -1.64
SNX18-203ENST00000381410 LCE1EQ5T753 118 aa4.82□□□□□ -1.64
SNX18-203ENST00000381410 LCE1FQ5T754 118 aa4.82□□□□□ -1.64
SNX18-203ENST00000381410 MACF1Q9UPN3 7388 aaKnown RBP4.82□□□□□ -1.64
SNX18-203ENST00000381410 SSPOA2VEC9 5147 aa4.75□□□□□ -1.65
SNX18-203ENST00000381410 NEBP20929 6669 aa4.69□□□□□ -1.66
SNX18-203ENST00000381410 MUC12Q9UKN1 5478 aa4.63□□□□□ -1.67
SNX18-203ENST00000381410 KRTAP9-9Q9BYP9 154 aa4.57□□□□□ -1.68
SNX18-203ENST00000381410 KRTAP4-6Q9BYQ5 205 aa4.56□□□□□ -1.68
SNX18-203ENST00000381410 KRTAP20-2Q3LI61 65 aa4.54□□□□□ -1.68
SNX18-203ENST00000381410 MDN1Q9NU22 5596 aa4.52□□□□□ -1.69
SNX18-203ENST00000381410 MUC19Q7Z5P9 8384 aa4.43□□□□□ -1.7
SNX18-203ENST00000381410 KRTAP4-11Q9BYQ6 195 aa4.34□□□□□ -1.71
SNX18-203ENST00000381410 GPR98Q8WXG9 6306 aa4.23□□□□□ -1.73
SNX18-203ENST00000381410 KRTAP5-4Q6L8H1 288 aa4.23□□□□□ -1.73
SNX18-203ENST00000381410 KRTAP5-5Q701N2 237 aaPredicted RBP4.13□□□□□ -1.75
SNX18-203ENST00000381410 KRTAP4-4Q9BYR3 166 aa4□□□□□ -1.77
SNX18-203ENST00000381410 KRTAP4-12Q9BQ66 201 aa3.95□□□□□ -1.78
SNX18-203ENST00000381410 KRTAP4-2Q9BYR5 136 aa3.95□□□□□ -1.78
SNX18-203ENST00000381410 MUC5ACP98088 5654 aa3.79□□□□□ -1.8
SNX18-203ENST00000381410 KRTAP5-3Q6L8H2 238 aa3.7□□□□□ -1.82
SNX18-203ENST00000381410 HMCN1Q96RW7 5635 aa3.63□□□□□ -1.83
SNX18-203ENST00000381410 AHNAK2Q8IVF2 5795 aa3.53□□□□□ -1.84
SNX18-203ENST00000381410 KRTAP5-2Q701N4 177 aa3.4□□□□□ -1.87
SNX18-203ENST00000381410 KRTAP5-8O75690 187 aa3.36□□□□□ -1.87
SNX18-203ENST00000381410 KRTAP5-10Q6L8G5 202 aa3.35□□□□□ -1.87
SNX18-203ENST00000381410 MUC5BQ9HC84 5762 aaPredicted RBP3.11□□□□□ -1.91
SNX18-203ENST00000381410 KRTAP5-11Q6L8G4 156 aa3.05□□□□□ -1.92
SNX18-203ENST00000381410 AHNAKQ09666 5890 aaKnown RBP2.99□□□□□ -1.93
SNX18-203ENST00000381410 KRTAP5-1Q6L8H4 278 aa2.95□□□□□ -1.94
SNX18-203ENST00000381410 PHGR1C9JFL3 82 aa2.92□□□□□ -1.94
SNX18-203ENST00000381410 KRTAP21-2Q3LI59 83 aa2.87□□□□□ -1.95
SNX18-203ENST00000381410 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.74□□□□□ -1.97
SNX18-203ENST00000381410 KRTAP21-1Q3LI58 79 aa2.58□□□□□ -2
SNX18-203ENST00000381410 KRTAP5-7Q6L8G8 165 aa2.4□□□□□ -2.03
SNX18-203ENST00000381410 MUC16Q8WXI7 14507 aa1.8□□□□□ -2.12
Retrieved 77 of 20,778 RNA–protein pairs in 5.7 ms