RNA–Protein interactions for RNA: ENST00000381160.7

NPC1L1-202, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1L1, Length 4,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-202ENST00000381160 LOC100996750A0A140TA64 210 aa3.69□□□□□ -1.82
NPC1L1-202ENST00000381160 FCGBPQ9Y6R7 5405 aaPredicted RBP3.67□□□□□ -1.82
NPC1L1-202ENST00000381160 MT1GP13640 62 aa3.66□□□□□ -1.82
NPC1L1-202ENST00000381160 MT1EP04732 61 aa3.66□□□□□ -1.82
NPC1L1-202ENST00000381160 KRTAP4-3Q9BYR4 195 aa3.65□□□□□ -1.83
NPC1L1-202ENST00000381160 MACF1Q9UPN3 7388 aaKnown RBP3.59□□□□□ -1.83
NPC1L1-202ENST00000381160 DSTQ03001 7570 aaKnown RBP3.59□□□□□ -1.83
NPC1L1-202ENST00000381160 KRTAP9-2Q9BYQ4 174 aa3.57□□□□□ -1.84
NPC1L1-202ENST00000381160 SYNE2Q8WXH0 6885 aaKnown RBP3.57□□□□□ -1.84
NPC1L1-202ENST00000381160 KRTAP19-6Q3LI70 58 aa3.56□□□□□ -1.84
NPC1L1-202ENST00000381160 KRTAP19-4Q3LI73 84 aa3.55□□□□□ -1.84
NPC1L1-202ENST00000381160 MUC12Q9UKN1 5478 aa3.55□□□□□ -1.84
NPC1L1-202ENST00000381160 SYNE1Q8NF91 8797 aaKnown RBP3.54□□□□□ -1.84
NPC1L1-202ENST00000381160 LCE3BQ5TA77 95 aa3.52□□□□□ -1.85
NPC1L1-202ENST00000381160 SPRR2FQ96RM1 72 aa3.52□□□□□ -1.85
NPC1L1-202ENST00000381160 KRTAP4-9Q9BYQ8 210 aa3.47□□□□□ -1.85
NPC1L1-202ENST00000381160 MDN1Q9NU22 5596 aa3.45□□□□□ -1.86
NPC1L1-202ENST00000381160 MT1MQ8N339 61 aa3.42□□□□□ -1.86
NPC1L1-202ENST00000381160 OBSCNQ5VST9 7968 aa3.42□□□□□ -1.86
NPC1L1-202ENST00000381160 KRTAP19-3Q7Z4W3 81 aa3.39□□□□□ -1.87
NPC1L1-202ENST00000381160 LCE3DQ9BYE3 92 aa3.31□□□□□ -1.88
NPC1L1-202ENST00000381160 KRTAP9-6A0A140TA67 174 aa3.31□□□□□ -1.88
NPC1L1-202ENST00000381160 PRM1P04553 51 aa3.31□□□□□ -1.88
NPC1L1-202ENST00000381160 KRTAP9-7A8MTY7 169 aa3.28□□□□□ -1.88
NPC1L1-202ENST00000381160 SPRR2EP22531 72 aa3.28□□□□□ -1.88
NPC1L1-202ENST00000381160 SPRR2BP35325 72 aa3.28□□□□□ -1.88
NPC1L1-202ENST00000381160 SPRR2AP35326 72 aa3.28□□□□□ -1.88
NPC1L1-202ENST00000381160 LCE3EQ5T5B0 92 aa3.27□□□□□ -1.89
NPC1L1-202ENST00000381160 KRTAP6-1Q3LI64 71 aa3.2□□□□□ -1.9
NPC1L1-202ENST00000381160 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.16□□□□□ -1.9
NPC1L1-202ENST00000381160 SPRR2DP22532 72 aa3.15□□□□□ -1.9
NPC1L1-202ENST00000381160 LCE5AQ5TCM9 118 aa3.15□□□□□ -1.9
NPC1L1-202ENST00000381160 MT1AP04731 61 aa3.14□□□□□ -1.91
NPC1L1-202ENST00000381160 LCE1AQ5T7P2 110 aa3.14□□□□□ -1.91
NPC1L1-202ENST00000381160 KRTAP6-3Q3LI67 103 aa3.13□□□□□ -1.91
NPC1L1-202ENST00000381160 KRTAP5-5Q701N2 237 aaPredicted RBP3.1□□□□□ -1.91
NPC1L1-202ENST00000381160 KRTAP6-2Q3LI66 62 aa3.07□□□□□ -1.92
NPC1L1-202ENST00000381160 KRTAP2-2Q9BYT5 123 aa3.04□□□□□ -1.92
NPC1L1-202ENST00000381160 LCE4AQ5TA78 99 aa3.04□□□□□ -1.92
NPC1L1-202ENST00000381160 KRTAP5-9P26371 169 aa3.03□□□□□ -1.92
NPC1L1-202ENST00000381160 LCE1FQ5T754 118 aa3.01□□□□□ -1.93
NPC1L1-202ENST00000381160 KRTAP9-4Q9BYQ2 154 aa2.99□□□□□ -1.93
NPC1L1-202ENST00000381160 LCE1EQ5T753 118 aa2.98□□□□□ -1.93
NPC1L1-202ENST00000381160 NEBP20929 6669 aa2.92□□□□□ -1.94
NPC1L1-202ENST00000381160 KRTAP9-9Q9BYP9 154 aa2.85□□□□□ -1.95
NPC1L1-202ENST00000381160 MT3P25713 68 aa2.83□□□□□ -1.96
NPC1L1-202ENST00000381160 MT4P47944 62 aa2.83□□□□□ -1.96
NPC1L1-202ENST00000381160 LCE1DQ5T752 114 aa2.83□□□□□ -1.96
NPC1L1-202ENST00000381160 KRTAP20-1Q3LI63 56 aa2.78□□□□□ -1.97
NPC1L1-202ENST00000381160 MUC19Q7Z5P9 8384 aa2.77□□□□□ -1.97
NPC1L1-202ENST00000381160 HMCN1Q96RW7 5635 aa2.65□□□□□ -1.99
NPC1L1-202ENST00000381160 KRTAP4-6Q9BYQ5 205 aa2.57□□□□□ -2
NPC1L1-202ENST00000381160 KRTAP4-11Q9BYQ6 195 aa2.51□□□□□ -2.01
NPC1L1-202ENST00000381160 KRTAP5-4Q6L8H1 288 aa2.49□□□□□ -2.01
NPC1L1-202ENST00000381160 KRTAP20-2Q3LI61 65 aa2.47□□□□□ -2.01
NPC1L1-202ENST00000381160 LCE1BQ5T7P3 118 aa2.47□□□□□ -2.01
NPC1L1-202ENST00000381160 MUC5ACP98088 5654 aa2.39□□□□□ -2.03
NPC1L1-202ENST00000381160 KRTAP5-3Q6L8H2 238 aa2.3□□□□□ -2.04
NPC1L1-202ENST00000381160 KRTAP5-2Q701N4 177 aa2.25□□□□□ -2.05
NPC1L1-202ENST00000381160 KRTAP5-10Q6L8G5 202 aa2.24□□□□□ -2.05
NPC1L1-202ENST00000381160 AHNAK2Q8IVF2 5795 aa2.23□□□□□ -2.05
NPC1L1-202ENST00000381160 GPR98Q8WXG9 6306 aa2.14□□□□□ -2.07
NPC1L1-202ENST00000381160 KRTAP4-4Q9BYR3 166 aa2.09□□□□□ -2.08
NPC1L1-202ENST00000381160 MUC5BQ9HC84 5762 aaPredicted RBP2.08□□□□□ -2.08
NPC1L1-202ENST00000381160 KRTAP5-1Q6L8H4 278 aa2.06□□□□□ -2.08
NPC1L1-202ENST00000381160 KRTAP5-8O75690 187 aa2.02□□□□□ -2.09
NPC1L1-202ENST00000381160 KRTAP4-2Q9BYR5 136 aa2.01□□□□□ -2.09
NPC1L1-202ENST00000381160 LCE1CQ5T751 118 aa2.01□□□□□ -2.09
NPC1L1-202ENST00000381160 KRTAP4-12Q9BQ66 201 aa1.98□□□□□ -2.09
NPC1L1-202ENST00000381160 KRTAP21-1Q3LI58 79 aa1.95□□□□□ -2.1
NPC1L1-202ENST00000381160 KRTAP21-2Q3LI59 83 aa1.95□□□□□ -2.1
NPC1L1-202ENST00000381160 KRTAP5-7Q6L8G8 165 aa1.81□□□□□ -2.12
NPC1L1-202ENST00000381160 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.77□□□□□ -2.13
NPC1L1-202ENST00000381160 KRTAP5-11Q6L8G4 156 aa1.72□□□□□ -2.13
NPC1L1-202ENST00000381160 AHNAKQ09666 5890 aaKnown RBP1.66□□□□□ -2.14
NPC1L1-202ENST00000381160 PHGR1C9JFL3 82 aa1.46□□□□□ -2.18
NPC1L1-202ENST00000381160 MUC16Q8WXI7 14507 aa1.02□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 132.1 ms