RNA–Protein interactions for RNA: ENST00000379538.7

SNCAIP-203, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 2,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-203ENST00000379538 KRTAP4-7Q9BYR0 210 aa4.98□□□□□ -1.61
SNCAIP-203ENST00000379538 KRTAP19-7Q3SYF9 63 aa4.89□□□□□ -1.63
SNCAIP-203ENST00000379538 MDN1Q9NU22 5596 aa4.89□□□□□ -1.63
SNCAIP-203ENST00000379538 DSTQ03001 7570 aaKnown RBP4.84□□□□□ -1.64
SNCAIP-203ENST00000379538 KRTAP2-3P0C7H8 128 aa4.79□□□□□ -1.64
SNCAIP-203ENST00000379538 KRTAP2-4Q9BYR9 128 aa4.79□□□□□ -1.64
SNCAIP-203ENST00000379538 KRTAP2-1Q9BYU5 128 aa4.79□□□□□ -1.64
SNCAIP-203ENST00000379538 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.78□□□□□ -1.64
SNCAIP-203ENST00000379538 MT1EP04732 61 aa4.76□□□□□ -1.65
SNCAIP-203ENST00000379538 SPRR2FQ96RM1 72 aa4.76□□□□□ -1.65
SNCAIP-203ENST00000379538 KRTAP5-9P26371 169 aa4.72□□□□□ -1.65
SNCAIP-203ENST00000379538 KRTAP6-3Q3LI67 103 aa4.72□□□□□ -1.65
SNCAIP-203ENST00000379538 MT1LQ93083 61 aa4.67□□□□□ -1.66
SNCAIP-203ENST00000379538 KRTAP19-4Q3LI73 84 aa4.65□□□□□ -1.67
SNCAIP-203ENST00000379538 KRTAP4-3Q9BYR4 195 aa4.64□□□□□ -1.67
SNCAIP-203ENST00000379538 LOC100996750A0A140TA64 210 aa4.61□□□□□ -1.67
SNCAIP-203ENST00000379538 KRTAP9-7A8MTY7 169 aa4.56□□□□□ -1.68
SNCAIP-203ENST00000379538 KRTAP19-3Q7Z4W3 81 aa4.55□□□□□ -1.68
SNCAIP-203ENST00000379538 LCE1AQ5T7P2 110 aa4.49□□□□□ -1.69
SNCAIP-203ENST00000379538 MT1MQ8N339 61 aa4.49□□□□□ -1.69
SNCAIP-203ENST00000379538 LCE5AQ5TCM9 118 aa4.47□□□□□ -1.69
SNCAIP-203ENST00000379538 SPRR2EP22531 72 aa4.46□□□□□ -1.7
SNCAIP-203ENST00000379538 SPRR2BP35325 72 aa4.46□□□□□ -1.7
SNCAIP-203ENST00000379538 SPRR2AP35326 72 aa4.46□□□□□ -1.7
SNCAIP-203ENST00000379538 MT1GP13640 62 aa4.46□□□□□ -1.7
SNCAIP-203ENST00000379538 KRTAP12-4P60329 112 aa4.45□□□□□ -1.7
SNCAIP-203ENST00000379538 SYNE1Q8NF91 8797 aaKnown RBP4.4□□□□□ -1.7
SNCAIP-203ENST00000379538 NEBP20929 6669 aa4.32□□□□□ -1.72
SNCAIP-203ENST00000379538 KRTAP4-9Q9BYQ8 210 aa4.31□□□□□ -1.72
SNCAIP-203ENST00000379538 SPRR2DP22532 72 aa4.27□□□□□ -1.73
SNCAIP-203ENST00000379538 LCE3BQ5TA77 95 aa4.22□□□□□ -1.73
SNCAIP-203ENST00000379538 OBSCNQ5VST9 7968 aa4.22□□□□□ -1.73
SNCAIP-203ENST00000379538 KRTAP20-1Q3LI63 56 aa4.08□□□□□ -1.76
SNCAIP-203ENST00000379538 KRTAP2-2Q9BYT5 123 aa4.04□□□□□ -1.76
SNCAIP-203ENST00000379538 KRTAP6-1Q3LI64 71 aa4.02□□□□□ -1.77
SNCAIP-203ENST00000379538 KRTAP5-5Q701N2 237 aaPredicted RBP4□□□□□ -1.77
SNCAIP-203ENST00000379538 PRM1P04553 51 aa3.99□□□□□ -1.77
SNCAIP-203ENST00000379538 LCE3DQ9BYE3 92 aa3.95□□□□□ -1.78
SNCAIP-203ENST00000379538 KRTAP4-6Q9BYQ5 205 aa3.94□□□□□ -1.78
SNCAIP-203ENST00000379538 KRTAP5-4Q6L8H1 288 aa3.92□□□□□ -1.78
SNCAIP-203ENST00000379538 LCE4AQ5TA78 99 aa3.91□□□□□ -1.78
SNCAIP-203ENST00000379538 LCE3EQ5T5B0 92 aa3.9□□□□□ -1.79
SNCAIP-203ENST00000379538 MT1AP04731 61 aa3.89□□□□□ -1.79
SNCAIP-203ENST00000379538 MT4P47944 62 aa3.86□□□□□ -1.79
SNCAIP-203ENST00000379538 HMCN1Q96RW7 5635 aa3.82□□□□□ -1.8
SNCAIP-203ENST00000379538 KRTAP4-12Q9BQ66 201 aa3.78□□□□□ -1.8
SNCAIP-203ENST00000379538 KRTAP6-2Q3LI66 62 aa3.75□□□□□ -1.81
SNCAIP-203ENST00000379538 KRTAP9-4Q9BYQ2 154 aa3.72□□□□□ -1.81
SNCAIP-203ENST00000379538 LCE1DQ5T752 114 aa3.7□□□□□ -1.82
SNCAIP-203ENST00000379538 KRTAP9-9Q9BYP9 154 aa3.65□□□□□ -1.82
SNCAIP-203ENST00000379538 KRTAP20-2Q3LI61 65 aa3.6□□□□□ -1.83
SNCAIP-203ENST00000379538 KRTAP5-2Q701N4 177 aa3.54□□□□□ -1.84
SNCAIP-203ENST00000379538 MT3P25713 68 aa3.52□□□□□ -1.85
SNCAIP-203ENST00000379538 KRTAP5-3Q6L8H2 238 aa3.51□□□□□ -1.85
SNCAIP-203ENST00000379538 AHNAK2Q8IVF2 5795 aa3.31□□□□□ -1.88
SNCAIP-203ENST00000379538 LCE1EQ5T753 118 aa3.29□□□□□ -1.88
SNCAIP-203ENST00000379538 KRTAP5-10Q6L8G5 202 aa3.19□□□□□ -1.9
SNCAIP-203ENST00000379538 KRTAP4-11Q9BYQ6 195 aa3.19□□□□□ -1.9
SNCAIP-203ENST00000379538 MUC5ACP98088 5654 aa3.13□□□□□ -1.91
SNCAIP-203ENST00000379538 KRTAP4-2Q9BYR5 136 aa3.12□□□□□ -1.91
SNCAIP-203ENST00000379538 LCE1BQ5T7P3 118 aa3.06□□□□□ -1.92
SNCAIP-203ENST00000379538 KRTAP5-7Q6L8G8 165 aa3.06□□□□□ -1.92
SNCAIP-203ENST00000379538 GPR98Q8WXG9 6306 aa3.05□□□□□ -1.92
SNCAIP-203ENST00000379538 KRTAP5-8O75690 187 aa3.05□□□□□ -1.92
SNCAIP-203ENST00000379538 KRTAP5-1Q6L8H4 278 aa3.03□□□□□ -1.92
SNCAIP-203ENST00000379538 MUC5BQ9HC84 5762 aaPredicted RBP2.93□□□□□ -1.94
SNCAIP-203ENST00000379538 LCE1CQ5T751 118 aa2.91□□□□□ -1.94
SNCAIP-203ENST00000379538 MUC19Q7Z5P9 8384 aa2.77□□□□□ -1.97
SNCAIP-203ENST00000379538 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.76□□□□□ -1.97
SNCAIP-203ENST00000379538 LCE1FQ5T754 118 aa2.72□□□□□ -1.97
SNCAIP-203ENST00000379538 AHNAKQ09666 5890 aaKnown RBP2.6□□□□□ -1.99
SNCAIP-203ENST00000379538 KRTAP5-11Q6L8G4 156 aa2.6□□□□□ -1.99
SNCAIP-203ENST00000379538 KRTAP21-2Q3LI59 83 aa2.58□□□□□ -2
SNCAIP-203ENST00000379538 KRTAP4-4Q9BYR3 166 aa2.54□□□□□ -2
SNCAIP-203ENST00000379538 KRTAP21-1Q3LI58 79 aa2.43□□□□□ -2.02
SNCAIP-203ENST00000379538 PHGR1C9JFL3 82 aa2.2□□□□□ -2.06
SNCAIP-203ENST00000379538 MUC16Q8WXI7 14507 aa1.47□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 11.2 ms