RNA–Protein interactions for RNA: ENST00000378904.4

LYSMD4-203, Transcript of LysM domain containing 4, humanhuman

BASIC

Gene LYSMD4, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-203ENST00000378904 SYNE2Q8WXH0 6885 aaKnown RBP6.18□□□□□ -1.42
LYSMD4-203ENST00000378904 LCE3CQ5T5A8 94 aa6.17□□□□□ -1.42
LYSMD4-203ENST00000378904 MUC12Q9UKN1 5478 aa6.16□□□□□ -1.42
LYSMD4-203ENST00000378904 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.15□□□□□ -1.42
LYSMD4-203ENST00000378904 KRTAP5-9P26371 169 aa6.13□□□□□ -1.43
LYSMD4-203ENST00000378904 KRTAP19-4Q3LI73 84 aa6.13□□□□□ -1.43
LYSMD4-203ENST00000378904 KRTAP19-3Q7Z4W3 81 aa6.11□□□□□ -1.43
LYSMD4-203ENST00000378904 KRTAP4-7Q9BYR0 210 aa6.07□□□□□ -1.44
LYSMD4-203ENST00000378904 MT1GP13640 62 aa6.04□□□□□ -1.44
LYSMD4-203ENST00000378904 LOC100996750A0A140TA64 210 aa6.03□□□□□ -1.44
LYSMD4-203ENST00000378904 KRTAP4-6Q9BYQ5 205 aa6.03□□□□□ -1.44
LYSMD4-203ENST00000378904 KRTAP6-3Q3LI67 103 aa6□□□□□ -1.45
LYSMD4-203ENST00000378904 LCE5AQ5TCM9 118 aa5.99□□□□□ -1.45
LYSMD4-203ENST00000378904 MT1MQ8N339 61 aa5.99□□□□□ -1.45
LYSMD4-203ENST00000378904 LCE1AQ5T7P2 110 aa5.94□□□□□ -1.46
LYSMD4-203ENST00000378904 MDN1Q9NU22 5596 aa5.9□□□□□ -1.46
LYSMD4-203ENST00000378904 SPRR2EP22531 72 aa5.9□□□□□ -1.47
LYSMD4-203ENST00000378904 SPRR2BP35325 72 aa5.9□□□□□ -1.47
LYSMD4-203ENST00000378904 SPRR2AP35326 72 aa5.9□□□□□ -1.47
LYSMD4-203ENST00000378904 KRTAP4-3Q9BYR4 195 aa5.9□□□□□ -1.47
LYSMD4-203ENST00000378904 KRTAP9-6A8MVA2 160 aa5.86□□□□□ -1.47
LYSMD4-203ENST00000378904 KRTAP9-7A8MTY7 169 aa5.8□□□□□ -1.48
LYSMD4-203ENST00000378904 KRTAP2-3P0C7H8 128 aa5.69□□□□□ -1.5
LYSMD4-203ENST00000378904 KRTAP2-4Q9BYR9 128 aa5.69□□□□□ -1.5
LYSMD4-203ENST00000378904 KRTAP2-1Q9BYU5 128 aa5.69□□□□□ -1.5
LYSMD4-203ENST00000378904 DSTQ03001 7570 aaKnown RBP5.68□□□□□ -1.5
LYSMD4-203ENST00000378904 SPRR2DP22532 72 aa5.68□□□□□ -1.5
LYSMD4-203ENST00000378904 NEBP20929 6669 aa5.56□□□□□ -1.52
LYSMD4-203ENST00000378904 LCE3BQ5TA77 95 aa5.45□□□□□ -1.54
LYSMD4-203ENST00000378904 KRTAP5-5Q701N2 237 aaPredicted RBP5.39□□□□□ -1.55
LYSMD4-203ENST00000378904 MT1AP04731 61 aa5.29□□□□□ -1.56
LYSMD4-203ENST00000378904 KRTAP6-1Q3LI64 71 aa5.26□□□□□ -1.57
LYSMD4-203ENST00000378904 KRTAP20-1Q3LI63 56 aa5.14□□□□□ -1.59
LYSMD4-203ENST00000378904 KRTAP2-2Q9BYT5 123 aa5.14□□□□□ -1.59
LYSMD4-203ENST00000378904 KRTAP5-4Q6L8H1 288 aa5.12□□□□□ -1.59
LYSMD4-203ENST00000378904 SYNE1Q8NF91 8797 aaKnown RBP5.11□□□□□ -1.59
LYSMD4-203ENST00000378904 KRTAP9-4Q9BYQ2 154 aa5.03□□□□□ -1.6
LYSMD4-203ENST00000378904 KRTAP12-4P60329 112 aa5.02□□□□□ -1.61
LYSMD4-203ENST00000378904 LCE4AQ5TA78 99 aa5.02□□□□□ -1.61
LYSMD4-203ENST00000378904 MT4P47944 62 aa4.94□□□□□ -1.62
LYSMD4-203ENST00000378904 KRTAP4-9Q9BYQ8 210 aa4.89□□□□□ -1.63
LYSMD4-203ENST00000378904 KRTAP9-9Q9BYP9 154 aa4.86□□□□□ -1.63
LYSMD4-203ENST00000378904 KRTAP6-2Q3LI66 62 aa4.84□□□□□ -1.63
LYSMD4-203ENST00000378904 LCE1DQ5T752 114 aa4.84□□□□□ -1.63
LYSMD4-203ENST00000378904 KRTAP20-2Q3LI61 65 aa4.81□□□□□ -1.64
LYSMD4-203ENST00000378904 MT3P25713 68 aa4.79□□□□□ -1.64
LYSMD4-203ENST00000378904 HMCN1Q96RW7 5635 aa4.75□□□□□ -1.65
LYSMD4-203ENST00000378904 KRTAP5-3Q6L8H2 238 aa4.72□□□□□ -1.65
LYSMD4-203ENST00000378904 KRTAP4-12Q9BQ66 201 aa4.67□□□□□ -1.66
LYSMD4-203ENST00000378904 KRTAP5-2Q701N4 177 aa4.66□□□□□ -1.66
LYSMD4-203ENST00000378904 LCE3DQ9BYE3 92 aa4.64□□□□□ -1.67
LYSMD4-203ENST00000378904 KRTAP4-2Q9BYR5 136 aa4.64□□□□□ -1.67
LYSMD4-203ENST00000378904 LCE3EQ5T5B0 92 aa4.57□□□□□ -1.68
LYSMD4-203ENST00000378904 PRM1P04553 51 aa4.46□□□□□ -1.69
LYSMD4-203ENST00000378904 OBSCNQ5VST9 7968 aa4.43□□□□□ -1.7
LYSMD4-203ENST00000378904 KRTAP4-11Q9BYQ6 195 aa4.26□□□□□ -1.73
LYSMD4-203ENST00000378904 AHNAK2Q8IVF2 5795 aa4.17□□□□□ -1.74
LYSMD4-203ENST00000378904 LCE1EQ5T753 118 aa4.14□□□□□ -1.75
LYSMD4-203ENST00000378904 KRTAP5-1Q6L8H4 278 aa4.03□□□□□ -1.76
LYSMD4-203ENST00000378904 KRTAP5-8O75690 187 aa4□□□□□ -1.77
LYSMD4-203ENST00000378904 KRTAP5-10Q6L8G5 202 aa3.99□□□□□ -1.77
LYSMD4-203ENST00000378904 LCE1BQ5T7P3 118 aa3.92□□□□□ -1.78
LYSMD4-203ENST00000378904 LCE1CQ5T751 118 aa3.86□□□□□ -1.79
LYSMD4-203ENST00000378904 KRTAP5-7Q6L8G8 165 aa3.86□□□□□ -1.79
LYSMD4-203ENST00000378904 MUC5ACP98088 5654 aa3.86□□□□□ -1.79
LYSMD4-203ENST00000378904 GPR98Q8WXG9 6306 aa3.71□□□□□ -1.82
LYSMD4-203ENST00000378904 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.62□□□□□ -1.83
LYSMD4-203ENST00000378904 KRTAP21-2Q3LI59 83 aa3.44□□□□□ -1.86
LYSMD4-203ENST00000378904 KRTAP5-11Q6L8G4 156 aa3.41□□□□□ -1.86
LYSMD4-203ENST00000378904 MUC5BQ9HC84 5762 aaPredicted RBP3.4□□□□□ -1.87
LYSMD4-203ENST00000378904 AHNAKQ09666 5890 aaKnown RBP3.08□□□□□ -1.92
LYSMD4-203ENST00000378904 KRTAP4-4Q9BYR3 166 aa3.08□□□□□ -1.92
LYSMD4-203ENST00000378904 LCE1FQ5T754 118 aa3.05□□□□□ -1.92
LYSMD4-203ENST00000378904 PHGR1C9JFL3 82 aa2.93□□□□□ -1.94
LYSMD4-203ENST00000378904 KRTAP21-1Q3LI58 79 aa2.9□□□□□ -1.95
LYSMD4-203ENST00000378904 MUC19Q7Z5P9 8384 aa2.63□□□□□ -1.99
LYSMD4-203ENST00000378904 MUC16Q8WXI7 14507 aa1.9□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 167.7 ms