RNA–Protein interactions for RNA: ENST00000377707.3

SHB-201, Transcript of SH2 domain containing adaptor protein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHB, Length 2,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHB-201ENST00000377707 MT1LQ93083 61 aa6.91□□□□□ -1.3
SHB-201ENST00000377707 SYNE2Q8WXH0 6885 aaKnown RBP6.91□□□□□ -1.3
SHB-201ENST00000377707 MT1EP04732 61 aa6.9□□□□□ -1.3
SHB-201ENST00000377707 DSTQ03001 7570 aaKnown RBP6.89□□□□□ -1.31
SHB-201ENST00000377707 KRTAP2-3P0C7H8 128 aa6.82□□□□□ -1.32
SHB-201ENST00000377707 KRTAP4-3Q9BYR4 195 aa6.82□□□□□ -1.32
SHB-201ENST00000377707 KRTAP2-4Q9BYR9 128 aa6.82□□□□□ -1.32
SHB-201ENST00000377707 KRTAP2-1Q9BYU5 128 aa6.82□□□□□ -1.32
SHB-201ENST00000377707 LOC100996750A0A140TA64 210 aa6.8□□□□□ -1.32
SHB-201ENST00000377707 KRTAP9-6A0A140TA67 174 aa6.66□□□□□ -1.34
SHB-201ENST00000377707 SPRR2FQ96RM1 72 aa6.66□□□□□ -1.34
SHB-201ENST00000377707 MT1GP13640 62 aa6.63□□□□□ -1.35
SHB-201ENST00000377707 MDN1Q9NU22 5596 aa6.63□□□□□ -1.35
SHB-201ENST00000377707 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.5□□□□□ -1.37
SHB-201ENST00000377707 MT1MQ8N339 61 aa6.46□□□□□ -1.38
SHB-201ENST00000377707 KRTAP19-3Q7Z4W3 81 aa6.43□□□□□ -1.38
SHB-201ENST00000377707 SYNE1Q8NF91 8797 aaKnown RBP6.42□□□□□ -1.38
SHB-201ENST00000377707 KRTAP19-4Q3LI73 84 aa6.41□□□□□ -1.38
SHB-201ENST00000377707 KRTAP5-9P26371 169 aa6.39□□□□□ -1.39
SHB-201ENST00000377707 KRTAP2-2Q9BYT5 123 aa6.38□□□□□ -1.39
SHB-201ENST00000377707 KRTAP12-4P60329 112 aa6.37□□□□□ -1.39
SHB-201ENST00000377707 LCE5AQ5TCM9 118 aa6.31□□□□□ -1.4
SHB-201ENST00000377707 LCE1AQ5T7P2 110 aa6.29□□□□□ -1.4
SHB-201ENST00000377707 SPRR2EP22531 72 aa6.26□□□□□ -1.41
SHB-201ENST00000377707 SPRR2BP35325 72 aa6.26□□□□□ -1.41
SHB-201ENST00000377707 SPRR2AP35326 72 aa6.26□□□□□ -1.41
SHB-201ENST00000377707 KRTAP6-3Q3LI67 103 aa6.25□□□□□ -1.41
SHB-201ENST00000377707 LCE3BQ5TA77 95 aa6.17□□□□□ -1.42
SHB-201ENST00000377707 KRTAP4-9Q9BYQ8 210 aa6.17□□□□□ -1.42
SHB-201ENST00000377707 KRTAP9-7A8MTY7 169 aa6.14□□□□□ -1.43
SHB-201ENST00000377707 OBSCNQ5VST9 7968 aa6.11□□□□□ -1.43
SHB-201ENST00000377707 SPRR2DP22532 72 aa6.01□□□□□ -1.45
SHB-201ENST00000377707 NEBP20929 6669 aa5.99□□□□□ -1.45
SHB-201ENST00000377707 KRTAP6-1Q3LI64 71 aa5.97□□□□□ -1.45
SHB-201ENST00000377707 KRTAP9-4Q9BYQ2 154 aa5.95□□□□□ -1.46
SHB-201ENST00000377707 LCE1EQ5T753 118 aa5.82□□□□□ -1.48
SHB-201ENST00000377707 PRM1P04553 51 aa5.8□□□□□ -1.48
SHB-201ENST00000377707 KRTAP9-9Q9BYP9 154 aa5.75□□□□□ -1.49
SHB-201ENST00000377707 MT1AP04731 61 aa5.72□□□□□ -1.49
SHB-201ENST00000377707 LCE3DQ9BYE3 92 aa5.67□□□□□ -1.5
SHB-201ENST00000377707 KRTAP5-5Q701N2 237 aaPredicted RBP5.65□□□□□ -1.5
SHB-201ENST00000377707 LCE4AQ5TA78 99 aa5.63□□□□□ -1.51
SHB-201ENST00000377707 LCE1DQ5T752 114 aa5.59□□□□□ -1.51
SHB-201ENST00000377707 LCE3EQ5T5B0 92 aa5.56□□□□□ -1.52
SHB-201ENST00000377707 LCE1FQ5T754 118 aa5.43□□□□□ -1.54
SHB-201ENST00000377707 KRTAP20-1Q3LI63 56 aa5.39□□□□□ -1.55
SHB-201ENST00000377707 KRTAP6-2Q3LI66 62 aa5.35□□□□□ -1.55
SHB-201ENST00000377707 MT4P47944 62 aa5.35□□□□□ -1.55
SHB-201ENST00000377707 KRTAP5-4Q6L8H1 288 aa5.33□□□□□ -1.56
SHB-201ENST00000377707 KRTAP4-6Q9BYQ5 205 aa5.3□□□□□ -1.56
SHB-201ENST00000377707 HMCN1Q96RW7 5635 aa5.24□□□□□ -1.57
SHB-201ENST00000377707 MT3P25713 68 aa5.13□□□□□ -1.59
SHB-201ENST00000377707 KRTAP20-2Q3LI61 65 aa5.07□□□□□ -1.6
SHB-201ENST00000377707 KRTAP5-3Q6L8H2 238 aa4.85□□□□□ -1.63
SHB-201ENST00000377707 KRTAP5-2Q701N4 177 aa4.84□□□□□ -1.63
SHB-201ENST00000377707 KRTAP4-12Q9BQ66 201 aa4.68□□□□□ -1.66
SHB-201ENST00000377707 MUC5ACP98088 5654 aa4.6□□□□□ -1.67
SHB-201ENST00000377707 AHNAK2Q8IVF2 5795 aa4.53□□□□□ -1.68
SHB-201ENST00000377707 KRTAP4-11Q9BYQ6 195 aa4.4□□□□□ -1.71
SHB-201ENST00000377707 LCE1BQ5T7P3 118 aa4.38□□□□□ -1.71
SHB-201ENST00000377707 KRTAP5-1Q6L8H4 278 aa4.25□□□□□ -1.73
SHB-201ENST00000377707 KRTAP5-8O75690 187 aa4.22□□□□□ -1.73
SHB-201ENST00000377707 KRTAP5-10Q6L8G5 202 aa4.18□□□□□ -1.74
SHB-201ENST00000377707 MUC19Q7Z5P9 8384 aa4.13□□□□□ -1.75
SHB-201ENST00000377707 KRTAP4-2Q9BYR5 136 aa4.1□□□□□ -1.75
SHB-201ENST00000377707 GPR98Q8WXG9 6306 aa4.1□□□□□ -1.75
SHB-201ENST00000377707 LCE1CQ5T751 118 aa4.01□□□□□ -1.77
SHB-201ENST00000377707 KRTAP5-7Q6L8G8 165 aa3.94□□□□□ -1.78
SHB-201ENST00000377707 MUC5BQ9HC84 5762 aaPredicted RBP3.92□□□□□ -1.78
SHB-201ENST00000377707 KRTAP21-2Q3LI59 83 aa3.79□□□□□ -1.8
SHB-201ENST00000377707 KRTAP21-1Q3LI58 79 aa3.78□□□□□ -1.8
SHB-201ENST00000377707 KRTAP4-4Q9BYR3 166 aa3.74□□□□□ -1.81
SHB-201ENST00000377707 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.69□□□□□ -1.82
SHB-201ENST00000377707 KRTAP5-11Q6L8G4 156 aa3.51□□□□□ -1.85
SHB-201ENST00000377707 AHNAKQ09666 5890 aaKnown RBP3.34□□□□□ -1.87
SHB-201ENST00000377707 PHGR1C9JFL3 82 aa3.06□□□□□ -1.92
SHB-201ENST00000377707 MUC16Q8WXI7 14507 aa2.01□□□□□ -2.09
Retrieved 77 of 20,778 RNA–protein pairs in 80.3 ms