RNA–Protein interactions for RNA: ENST00000377327.8

CRNKL1-201, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-201ENST00000377327 MT1EP04732 61 aa2.91□□□□□ -1.94
CRNKL1-201ENST00000377327 LCE3DQ9BYE3 92 aa2.91□□□□□ -1.94
CRNKL1-201ENST00000377327 OBSCNQ5VST9 7968 aa2.9□□□□□ -1.95
CRNKL1-201ENST00000377327 LCE2BO14633 110 aa2.9□□□□□ -1.95
CRNKL1-201ENST00000377327 KRTAP9-6A0A140TA67 174 aa2.89□□□□□ -1.95
CRNKL1-201ENST00000377327 USH2AO75445 5202 aa2.89□□□□□ -1.95
CRNKL1-201ENST00000377327 LCE3EQ5T5B0 92 aa2.88□□□□□ -1.95
CRNKL1-201ENST00000377327 KRTAP9-6A8MVA2 160 aa2.86□□□□□ -1.95
CRNKL1-201ENST00000377327 SPRR2EP22531 72 aa2.85□□□□□ -1.95
CRNKL1-201ENST00000377327 SPRR2BP35325 72 aa2.85□□□□□ -1.95
CRNKL1-201ENST00000377327 SPRR2AP35326 72 aa2.85□□□□□ -1.95
CRNKL1-201ENST00000377327 KRTAP19-7Q3SYF9 63 aa2.85□□□□□ -1.95
CRNKL1-201ENST00000377327 KRTAP19-3Q7Z4W3 81 aa2.81□□□□□ -1.96
CRNKL1-201ENST00000377327 LOC100996750A0A140TA64 210 aa2.81□□□□□ -1.96
CRNKL1-201ENST00000377327 PRM1P04553 51 aa2.77□□□□□ -1.97
CRNKL1-201ENST00000377327 SPRR2DP22532 72 aa2.77□□□□□ -1.97
CRNKL1-201ENST00000377327 MT1MQ8N339 61 aa2.76□□□□□ -1.97
CRNKL1-201ENST00000377327 KRTAP4-3Q9BYR4 195 aa2.76□□□□□ -1.97
CRNKL1-201ENST00000377327 SYNE2Q8WXH0 6885 aaKnown RBP2.76□□□□□ -1.97
CRNKL1-201ENST00000377327 KRTAP19-6Q3LI70 58 aa2.75□□□□□ -1.97
CRNKL1-201ENST00000377327 SSPOA2VEC9 5147 aa2.72□□□□□ -1.97
CRNKL1-201ENST00000377327 MACF1Q9UPN3 7388 aaKnown RBP2.69□□□□□ -1.98
CRNKL1-201ENST00000377327 DSTQ03001 7570 aaKnown RBP2.68□□□□□ -1.98
CRNKL1-201ENST00000377327 KRTAP4-9Q9BYQ8 210 aa2.66□□□□□ -1.98
CRNKL1-201ENST00000377327 FCGBPQ9Y6R7 5405 aaPredicted RBP2.66□□□□□ -1.98
CRNKL1-201ENST00000377327 KRTAP9-7A8MTY7 169 aa2.63□□□□□ -1.99
CRNKL1-201ENST00000377327 KMT2DO14686 5537 aa2.63□□□□□ -1.99
CRNKL1-201ENST00000377327 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.61□□□□□ -1.99
CRNKL1-201ENST00000377327 MT1AP04731 61 aa2.59□□□□□ -2
CRNKL1-201ENST00000377327 MT3P25713 68 aa2.55□□□□□ -2
CRNKL1-201ENST00000377327 KRTAP6-3Q3LI67 103 aa2.52□□□□□ -2.01
CRNKL1-201ENST00000377327 KRTAP6-1Q3LI64 71 aa2.49□□□□□ -2.01
CRNKL1-201ENST00000377327 KRTAP6-2Q3LI66 62 aa2.49□□□□□ -2.01
CRNKL1-201ENST00000377327 KRTAP20-1Q3LI63 56 aa2.47□□□□□ -2.01
CRNKL1-201ENST00000377327 MUC12Q9UKN1 5478 aa2.46□□□□□ -2.02
CRNKL1-201ENST00000377327 LCE5AQ5TCM9 118 aa2.45□□□□□ -2.02
CRNKL1-201ENST00000377327 LCE1AQ5T7P2 110 aa2.44□□□□□ -2.02
CRNKL1-201ENST00000377327 MDN1Q9NU22 5596 aa2.42□□□□□ -2.02
CRNKL1-201ENST00000377327 MT4P47944 62 aa2.41□□□□□ -2.02
CRNKL1-201ENST00000377327 NEBP20929 6669 aa2.36□□□□□ -2.03
CRNKL1-201ENST00000377327 KRTAP9-4Q9BYQ2 154 aa2.36□□□□□ -2.03
CRNKL1-201ENST00000377327 KRTAP2-2Q9BYT5 123 aa2.33□□□□□ -2.04
CRNKL1-201ENST00000377327 LCE1DQ5T752 114 aa2.27□□□□□ -2.05
CRNKL1-201ENST00000377327 LCE1BQ5T7P3 118 aa2.26□□□□□ -2.05
CRNKL1-201ENST00000377327 LCE4AQ5TA78 99 aa2.26□□□□□ -2.05
CRNKL1-201ENST00000377327 KRTAP5-5Q701N2 237 aaPredicted RBP2.23□□□□□ -2.05
CRNKL1-201ENST00000377327 KRTAP5-9P26371 169 aa2.21□□□□□ -2.06
CRNKL1-201ENST00000377327 MUC19Q7Z5P9 8384 aa2.07□□□□□ -2.08
CRNKL1-201ENST00000377327 GPR98Q8WXG9 6306 aa2.07□□□□□ -2.08
CRNKL1-201ENST00000377327 LCE1EQ5T753 118 aa2.05□□□□□ -2.08
CRNKL1-201ENST00000377327 KRTAP4-11Q9BYQ6 195 aa2.05□□□□□ -2.08
CRNKL1-201ENST00000377327 KRTAP9-9Q9BYP9 154 aa1.98□□□□□ -2.09
CRNKL1-201ENST00000377327 KRTAP4-6Q9BYQ5 205 aa1.93□□□□□ -2.1
CRNKL1-201ENST00000377327 HMCN1Q96RW7 5635 aa1.92□□□□□ -2.1
CRNKL1-201ENST00000377327 KRTAP20-2Q3LI61 65 aa1.92□□□□□ -2.1
CRNKL1-201ENST00000377327 KRTAP5-4Q6L8H1 288 aa1.88□□□□□ -2.11
CRNKL1-201ENST00000377327 LCE1CQ5T751 118 aa1.81□□□□□ -2.12
CRNKL1-201ENST00000377327 LCE1FQ5T754 118 aa1.81□□□□□ -2.12
CRNKL1-201ENST00000377327 MUC5ACP98088 5654 aa1.8□□□□□ -2.12
CRNKL1-201ENST00000377327 AHNAK2Q8IVF2 5795 aa1.77□□□□□ -2.13
CRNKL1-201ENST00000377327 KRTAP5-3Q6L8H2 238 aa1.74□□□□□ -2.13
CRNKL1-201ENST00000377327 KRTAP5-2Q701N4 177 aa1.74□□□□□ -2.13
CRNKL1-201ENST00000377327 KRTAP4-4Q9BYR3 166 aa1.7□□□□□ -2.14
CRNKL1-201ENST00000377327 KRTAP5-10Q6L8G5 202 aa1.67□□□□□ -2.14
CRNKL1-201ENST00000377327 KRTAP4-12Q9BQ66 201 aa1.66□□□□□ -2.14
CRNKL1-201ENST00000377327 KRTAP4-2Q9BYR5 136 aa1.6□□□□□ -2.15
CRNKL1-201ENST00000377327 KRTAP5-8O75690 187 aa1.56□□□□□ -2.16
CRNKL1-201ENST00000377327 MUC5BQ9HC84 5762 aaPredicted RBP1.55□□□□□ -2.16
CRNKL1-201ENST00000377327 KRTAP5-7Q6L8G8 165 aa1.54□□□□□ -2.16
CRNKL1-201ENST00000377327 AHNAKQ09666 5890 aaKnown RBP1.53□□□□□ -2.16
CRNKL1-201ENST00000377327 KRTAP5-1Q6L8H4 278 aa1.5□□□□□ -2.17
CRNKL1-201ENST00000377327 KRTAP21-1Q3LI58 79 aa1.43□□□□□ -2.18
CRNKL1-201ENST00000377327 KRTAP21-2Q3LI59 83 aa1.4□□□□□ -2.19
CRNKL1-201ENST00000377327 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.37□□□□□ -2.19
CRNKL1-201ENST00000377327 KRTAP5-11Q6L8G4 156 aa1.31□□□□□ -2.2
CRNKL1-201ENST00000377327 PHGR1C9JFL3 82 aa1.26□□□□□ -2.21
CRNKL1-201ENST00000377327 MUC16Q8WXI7 14507 aa0.8□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 119.4 ms