RNA–Protein interactions for RNA: ENST00000377307.6

ARHGAP39-202, Transcript of Rho GTPase activating protein 39, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ARHGAP39, Length 4,673 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGAP39-202ENST00000377307 SPRR2EP22531 72 aa5.17□□□□□ -1.58
ARHGAP39-202ENST00000377307 SPRR2BP35325 72 aa5.17□□□□□ -1.58
ARHGAP39-202ENST00000377307 SPRR2AP35326 72 aa5.17□□□□□ -1.58
ARHGAP39-202ENST00000377307 KRTAP19-7Q3SYF9 63 aa5.17□□□□□ -1.58
ARHGAP39-202ENST00000377307 RNF213Q63HN8 5207 aa5.17□□□□□ -1.58
ARHGAP39-202ENST00000377307 SYNE1Q8NF91 8797 aaKnown RBP5.11□□□□□ -1.59
ARHGAP39-202ENST00000377307 MT1MQ8N339 61 aa5.08□□□□□ -1.6
ARHGAP39-202ENST00000377307 MUC2Q02817 5179 aa5.06□□□□□ -1.6
ARHGAP39-202ENST00000377307 FSIP2Q5CZC0 6907 aa5.04□□□□□ -1.6
ARHGAP39-202ENST00000377307 KRTAP9-6A8MVA2 160 aa5.03□□□□□ -1.6
ARHGAP39-202ENST00000377307 LOC100996750A0A140TA64 210 aa5.03□□□□□ -1.6
ARHGAP39-202ENST00000377307 KRTAP9-2Q9BYQ4 174 aa5.02□□□□□ -1.61
ARHGAP39-202ENST00000377307 SPRR2DP22532 72 aa5□□□□□ -1.61
ARHGAP39-202ENST00000377307 KRTAP4-3Q9BYR4 195 aa4.98□□□□□ -1.61
ARHGAP39-202ENST00000377307 KRTAP19-6Q3LI70 58 aa4.95□□□□□ -1.62
ARHGAP39-202ENST00000377307 PRM1P04553 51 aa4.88□□□□□ -1.63
ARHGAP39-202ENST00000377307 KRTAP9-6A0A140TA67 174 aa4.73□□□□□ -1.65
ARHGAP39-202ENST00000377307 MT1AP04731 61 aa4.73□□□□□ -1.65
ARHGAP39-202ENST00000377307 MT3P25713 68 aa4.72□□□□□ -1.65
ARHGAP39-202ENST00000377307 KRTAP4-9Q9BYQ8 210 aa4.71□□□□□ -1.66
ARHGAP39-202ENST00000377307 KRTAP6-1Q3LI64 71 aa4.52□□□□□ -1.69
ARHGAP39-202ENST00000377307 LCE5AQ5TCM9 118 aa4.52□□□□□ -1.69
ARHGAP39-202ENST00000377307 OBSCNQ5VST9 7968 aa4.52□□□□□ -1.69
ARHGAP39-202ENST00000377307 FCGBPQ9Y6R7 5405 aaPredicted RBP4.51□□□□□ -1.69
ARHGAP39-202ENST00000377307 KMT2DO14686 5537 aa4.47□□□□□ -1.69
ARHGAP39-202ENST00000377307 USH2AO75445 5202 aa4.46□□□□□ -1.7
ARHGAP39-202ENST00000377307 KRTAP9-7A8MTY7 169 aa4.45□□□□□ -1.7
ARHGAP39-202ENST00000377307 MT4P47944 62 aa4.42□□□□□ -1.7
ARHGAP39-202ENST00000377307 KRTAP6-2Q3LI66 62 aa4.41□□□□□ -1.7
ARHGAP39-202ENST00000377307 KRTAP6-3Q3LI67 103 aa4.4□□□□□ -1.71
ARHGAP39-202ENST00000377307 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.38□□□□□ -1.71
ARHGAP39-202ENST00000377307 SYNE2Q8WXH0 6885 aaKnown RBP4.36□□□□□ -1.71
ARHGAP39-202ENST00000377307 DSTQ03001 7570 aaKnown RBP4.35□□□□□ -1.71
ARHGAP39-202ENST00000377307 LCE1AQ5T7P2 110 aa4.34□□□□□ -1.72
ARHGAP39-202ENST00000377307 KRTAP9-4Q9BYQ2 154 aa4.33□□□□□ -1.72
ARHGAP39-202ENST00000377307 KRTAP20-1Q3LI63 56 aa4.26□□□□□ -1.73
ARHGAP39-202ENST00000377307 LCE1DQ5T752 114 aa4.21□□□□□ -1.74
ARHGAP39-202ENST00000377307 LCE1BQ5T7P3 118 aa4.18□□□□□ -1.74
ARHGAP39-202ENST00000377307 MUC12Q9UKN1 5478 aa4.12□□□□□ -1.75
ARHGAP39-202ENST00000377307 KRTAP2-2Q9BYT5 123 aa4.06□□□□□ -1.76
ARHGAP39-202ENST00000377307 SSPOA2VEC9 5147 aa4.05□□□□□ -1.76
ARHGAP39-202ENST00000377307 MACF1Q9UPN3 7388 aaKnown RBP4.04□□□□□ -1.76
ARHGAP39-202ENST00000377307 LCE4AQ5TA78 99 aa4□□□□□ -1.77
ARHGAP39-202ENST00000377307 KRTAP5-9P26371 169 aa3.93□□□□□ -1.78
ARHGAP39-202ENST00000377307 KRTAP5-5Q701N2 237 aaPredicted RBP3.86□□□□□ -1.79
ARHGAP39-202ENST00000377307 NEBP20929 6669 aa3.78□□□□□ -1.8
ARHGAP39-202ENST00000377307 MDN1Q9NU22 5596 aa3.74□□□□□ -1.81
ARHGAP39-202ENST00000377307 KRTAP4-11Q9BYQ6 195 aa3.59□□□□□ -1.83
ARHGAP39-202ENST00000377307 LCE1FQ5T754 118 aa3.56□□□□□ -1.84
ARHGAP39-202ENST00000377307 KRTAP4-6Q9BYQ5 205 aa3.56□□□□□ -1.84
ARHGAP39-202ENST00000377307 MUC19Q7Z5P9 8384 aa3.52□□□□□ -1.85
ARHGAP39-202ENST00000377307 KRTAP20-2Q3LI61 65 aa3.49□□□□□ -1.85
ARHGAP39-202ENST00000377307 KRTAP9-9Q9BYP9 154 aa3.49□□□□□ -1.85
ARHGAP39-202ENST00000377307 GPR98Q8WXG9 6306 aa3.48□□□□□ -1.85
ARHGAP39-202ENST00000377307 LCE1CQ5T751 118 aa3.32□□□□□ -1.88
ARHGAP39-202ENST00000377307 LCE1EQ5T753 118 aa3.32□□□□□ -1.88
ARHGAP39-202ENST00000377307 KRTAP5-4Q6L8H1 288 aa3.27□□□□□ -1.89
ARHGAP39-202ENST00000377307 KRTAP4-4Q9BYR3 166 aa3.07□□□□□ -1.92
ARHGAP39-202ENST00000377307 MUC5ACP98088 5654 aa3.06□□□□□ -1.92
ARHGAP39-202ENST00000377307 KRTAP5-3Q6L8H2 238 aa2.98□□□□□ -1.93
ARHGAP39-202ENST00000377307 KRTAP5-10Q6L8G5 202 aa2.98□□□□□ -1.93
ARHGAP39-202ENST00000377307 KRTAP4-12Q9BQ66 201 aa2.92□□□□□ -1.94
ARHGAP39-202ENST00000377307 KRTAP4-2Q9BYR5 136 aa2.92□□□□□ -1.94
ARHGAP39-202ENST00000377307 HMCN1Q96RW7 5635 aa2.91□□□□□ -1.94
ARHGAP39-202ENST00000377307 KRTAP5-2Q701N4 177 aa2.91□□□□□ -1.94
ARHGAP39-202ENST00000377307 AHNAK2Q8IVF2 5795 aa2.84□□□□□ -1.96
ARHGAP39-202ENST00000377307 KRTAP5-8O75690 187 aa2.71□□□□□ -1.98
ARHGAP39-202ENST00000377307 AHNAKQ09666 5890 aaKnown RBP2.64□□□□□ -1.99
ARHGAP39-202ENST00000377307 KRTAP5-1Q6L8H4 278 aa2.56□□□□□ -2
ARHGAP39-202ENST00000377307 KRTAP21-2Q3LI59 83 aa2.53□□□□□ -2
ARHGAP39-202ENST00000377307 KRTAP21-1Q3LI58 79 aa2.47□□□□□ -2.01
ARHGAP39-202ENST00000377307 KRTAP5-11Q6L8G4 156 aa2.47□□□□□ -2.01
ARHGAP39-202ENST00000377307 MUC5BQ9HC84 5762 aaPredicted RBP2.43□□□□□ -2.02
ARHGAP39-202ENST00000377307 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.42□□□□□ -2.02
ARHGAP39-202ENST00000377307 KRTAP5-7Q6L8G8 165 aa2.38□□□□□ -2.03
ARHGAP39-202ENST00000377307 PHGR1C9JFL3 82 aa2.2□□□□□ -2.06
ARHGAP39-202ENST00000377307 MUC16Q8WXI7 14507 aa1.36□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 137.3 ms