RNA–Protein interactions for RNA: ENST00000377200.9

PTAR1-202, Transcript of protein prenyltransferase alpha subunit repeat containing 1, humanhuman

TSL 1 (best) BASIC

Gene PTAR1, Length 9,876 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTAR1-202ENST00000377200 NEBP20929 6669 aa1.32□□□□□ -2.2
PTAR1-202ENST00000377200 USH2AO75445 5202 aa1.32□□□□□ -2.2
PTAR1-202ENST00000377200 KRTAP2-3P0C7H8 128 aa1.31□□□□□ -2.2
PTAR1-202ENST00000377200 KRTAP2-4Q9BYR9 128 aa1.31□□□□□ -2.2
PTAR1-202ENST00000377200 KRTAP2-1Q9BYU5 128 aa1.31□□□□□ -2.2
PTAR1-202ENST00000377200 SPRR2FQ96RM1 72 aa1.31□□□□□ -2.2
PTAR1-202ENST00000377200 KRTAP9-6A0A140TA67 174 aa1.31□□□□□ -2.2
PTAR1-202ENST00000377200 KRTAP4-8A0A0G2JLE6 195 aa1.29□□□□□ -2.2
PTAR1-202ENST00000377200 KRTAP4-8Q9BYQ9 185 aa1.29□□□□□ -2.2
PTAR1-202ENST00000377200 MACF1Q9UPN3 7388 aaKnown RBP1.29□□□□□ -2.2
PTAR1-202ENST00000377200 SSPOA2VEC9 5147 aa1.29□□□□□ -2.2
PTAR1-202ENST00000377200 MT1EP04732 61 aa1.28□□□□□ -2.2
PTAR1-202ENST00000377200 KRTAP4-7Q9BYR0 210 aa1.28□□□□□ -2.2
PTAR1-202ENST00000377200 KRTAP19-7Q3SYF9 63 aa1.27□□□□□ -2.21
PTAR1-202ENST00000377200 KRTAP19-3Q7Z4W3 81 aa1.26□□□□□ -2.21
PTAR1-202ENST00000377200 MT1LQ93083 61 aa1.26□□□□□ -2.21
PTAR1-202ENST00000377200 KRTAP6-3Q3LI67 103 aa1.25□□□□□ -2.21
PTAR1-202ENST00000377200 FCGBPQ9Y6R7 5405 aaPredicted RBP1.25□□□□□ -2.21
PTAR1-202ENST00000377200 SPRR2EP22531 72 aa1.24□□□□□ -2.21
PTAR1-202ENST00000377200 SPRR2BP35325 72 aa1.24□□□□□ -2.21
PTAR1-202ENST00000377200 SPRR2AP35326 72 aa1.24□□□□□ -2.21
PTAR1-202ENST00000377200 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.24□□□□□ -2.21
PTAR1-202ENST00000377200 FSIP2Q5CZC0 6907 aa1.24□□□□□ -2.21
PTAR1-202ENST00000377200 KRTAP5-9P26371 169 aa1.23□□□□□ -2.21
PTAR1-202ENST00000377200 LCE1AQ5T7P2 110 aa1.23□□□□□ -2.21
PTAR1-202ENST00000377200 MT1MQ8N339 61 aa1.22□□□□□ -2.21
PTAR1-202ENST00000377200 SPRR2DP22532 72 aa1.21□□□□□ -2.22
PTAR1-202ENST00000377200 LCE5AQ5TCM9 118 aa1.21□□□□□ -2.22
PTAR1-202ENST00000377200 KRTAP9-7A8MTY7 169 aa1.2□□□□□ -2.22
PTAR1-202ENST00000377200 AHNAK2Q8IVF2 5795 aa1.19□□□□□ -2.22
PTAR1-202ENST00000377200 SYNE1Q8NF91 8797 aaKnown RBP1.18□□□□□ -2.22
PTAR1-202ENST00000377200 KRTAP9-6A8MVA2 160 aa1.17□□□□□ -2.22
PTAR1-202ENST00000377200 KMT2DO14686 5537 aa1.17□□□□□ -2.22
PTAR1-202ENST00000377200 KRTAP4-12Q9BQ66 201 aa1.16□□□□□ -2.22
PTAR1-202ENST00000377200 MT1AP04731 61 aa1.16□□□□□ -2.22
PTAR1-202ENST00000377200 LCE1DQ5T752 114 aa1.15□□□□□ -2.23
PTAR1-202ENST00000377200 SYNE2Q8WXH0 6885 aaKnown RBP1.15□□□□□ -2.23
PTAR1-202ENST00000377200 KRTAP4-9Q9BYQ8 210 aa1.15□□□□□ -2.23
PTAR1-202ENST00000377200 KRTAP9-9Q9BYP9 154 aa1.14□□□□□ -2.23
PTAR1-202ENST00000377200 KRTAP9-4Q9BYQ2 154 aa1.14□□□□□ -2.23
PTAR1-202ENST00000377200 KRTAP6-2Q3LI66 62 aa1.14□□□□□ -2.23
PTAR1-202ENST00000377200 KRTAP4-3Q9BYR4 195 aa1.13□□□□□ -2.23
PTAR1-202ENST00000377200 DSTQ03001 7570 aaKnown RBP1.13□□□□□ -2.23
PTAR1-202ENST00000377200 AHNAKQ09666 5890 aaKnown RBP1.11□□□□□ -2.23
PTAR1-202ENST00000377200 KRTAP5-2Q701N4 177 aa1.11□□□□□ -2.23
PTAR1-202ENST00000377200 OBSCNQ5VST9 7968 aa1.11□□□□□ -2.23
PTAR1-202ENST00000377200 KRTAP20-1Q3LI63 56 aa1.11□□□□□ -2.23
PTAR1-202ENST00000377200 MUC12Q9UKN1 5478 aa1.1□□□□□ -2.23
PTAR1-202ENST00000377200 MDN1Q9NU22 5596 aa1.1□□□□□ -2.23
PTAR1-202ENST00000377200 LCE4AQ5TA78 99 aa1.09□□□□□ -2.23
PTAR1-202ENST00000377200 KRTAP2-2Q9BYT5 123 aa1.09□□□□□ -2.24
PTAR1-202ENST00000377200 HMCN1Q96RW7 5635 aa1.08□□□□□ -2.24
PTAR1-202ENST00000377200 KRTAP6-1Q3LI64 71 aa1.05□□□□□ -2.24
PTAR1-202ENST00000377200 KRTAP5-5Q701N2 237 aaPredicted RBP1.04□□□□□ -2.24
PTAR1-202ENST00000377200 LCE1EQ5T753 118 aa1.03□□□□□ -2.24
PTAR1-202ENST00000377200 KRTAP4-11Q9BYQ6 195 aa1.03□□□□□ -2.24
PTAR1-202ENST00000377200 KRTAP4-2Q9BYR5 136 aa1.03□□□□□ -2.25
PTAR1-202ENST00000377200 MT4P47944 62 aa1.02□□□□□ -2.25
PTAR1-202ENST00000377200 KRTAP5-3Q6L8H2 238 aa1.02□□□□□ -2.25
PTAR1-202ENST00000377200 KRTAP5-4Q6L8H1 288 aa1.01□□□□□ -2.25
PTAR1-202ENST00000377200 LCE1BQ5T7P3 118 aa1.01□□□□□ -2.25
PTAR1-202ENST00000377200 KRTAP20-2Q3LI61 65 aa0.97□□□□□ -2.25
PTAR1-202ENST00000377200 MUC5ACP98088 5654 aa0.96□□□□□ -2.26
PTAR1-202ENST00000377200 MUC19Q7Z5P9 8384 aa0.92□□□□□ -2.26
PTAR1-202ENST00000377200 LCE1FQ5T754 118 aa0.91□□□□□ -2.26
PTAR1-202ENST00000377200 LCE1CQ5T751 118 aa0.88□□□□□ -2.27
PTAR1-202ENST00000377200 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.85□□□□□ -2.27
PTAR1-202ENST00000377200 KRTAP5-7Q6L8G8 165 aa0.81□□□□□ -2.28
PTAR1-202ENST00000377200 KRTAP5-8O75690 187 aa0.79□□□□□ -2.28
PTAR1-202ENST00000377200 KRTAP5-10Q6L8G5 202 aa0.79□□□□□ -2.28
PTAR1-202ENST00000377200 KRTAP5-1Q6L8H4 278 aa0.77□□□□□ -2.29
PTAR1-202ENST00000377200 KRTAP4-4Q9BYR3 166 aa0.73□□□□□ -2.29
PTAR1-202ENST00000377200 KRTAP5-11Q6L8G4 156 aa0.71□□□□□ -2.3
PTAR1-202ENST00000377200 KRTAP21-1Q3LI58 79 aa0.69□□□□□ -2.3
PTAR1-202ENST00000377200 KRTAP21-2Q3LI59 83 aa0.66□□□□□ -2.3
PTAR1-202ENST00000377200 PHGR1C9JFL3 82 aa0.6□□□□□ -2.31
PTAR1-202ENST00000377200 MUC16Q8WXI7 14507 aa0.4□□□□□ -2.34
Retrieved 77 of 20,778 RNA–protein pairs in 13.2 ms