RNA–Protein interactions for RNA: ENST00000377190.7

SYVN1-203, Transcript of synoviolin 1, humanhuman

TSL 1 (best) BASIC

Gene SYVN1, Length 3,052 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-203ENST00000377190 LOC100996750A0A140TA64 210 aa5.8□□□□□ -1.48
SYVN1-203ENST00000377190 MT1GP13640 62 aa5.7□□□□□ -1.5
SYVN1-203ENST00000377190 KRTAP19-6Q3LI70 58 aa5.69□□□□□ -1.5
SYVN1-203ENST00000377190 KRTAP2-3P0C7H8 128 aa5.68□□□□□ -1.5
SYVN1-203ENST00000377190 KRTAP2-4Q9BYR9 128 aa5.68□□□□□ -1.5
SYVN1-203ENST00000377190 KRTAP2-1Q9BYU5 128 aa5.68□□□□□ -1.5
SYVN1-203ENST00000377190 LCE2DQ5TA82 110 aaPredicted RBP5.65□□□□□ -1.51
SYVN1-203ENST00000377190 MT1MQ8N339 61 aa5.52□□□□□ -1.53
SYVN1-203ENST00000377190 SYNE1Q8NF91 8797 aaKnown RBP5.51□□□□□ -1.53
SYVN1-203ENST00000377190 KRTAP19-3Q7Z4W3 81 aa5.5□□□□□ -1.53
SYVN1-203ENST00000377190 SPRR2FQ96RM1 72 aa5.5□□□□□ -1.53
SYVN1-203ENST00000377190 MACF1Q9UPN3 7388 aaKnown RBP5.49□□□□□ -1.53
SYVN1-203ENST00000377190 KRTAP19-4Q3LI73 84 aa5.42□□□□□ -1.54
SYVN1-203ENST00000377190 SYNE2Q8WXH0 6885 aaKnown RBP5.41□□□□□ -1.54
SYVN1-203ENST00000377190 MDN1Q9NU22 5596 aa5.33□□□□□ -1.56
SYVN1-203ENST00000377190 LCE3BQ5TA77 95 aa5.32□□□□□ -1.56
SYVN1-203ENST00000377190 OBSCNQ5VST9 7968 aa5.29□□□□□ -1.56
SYVN1-203ENST00000377190 KRTAP4-9Q9BYQ8 210 aa5.28□□□□□ -1.56
SYVN1-203ENST00000377190 LCE5AQ5TCM9 118 aa5.27□□□□□ -1.57
SYVN1-203ENST00000377190 KRTAP12-4P60329 112 aa5.25□□□□□ -1.57
SYVN1-203ENST00000377190 KRTAP6-1Q3LI64 71 aa5.09□□□□□ -1.59
SYVN1-203ENST00000377190 KRTAP9-2Q9BYQ4 174 aa4.99□□□□□ -1.61
SYVN1-203ENST00000377190 LCE1AQ5T7P2 110 aa4.97□□□□□ -1.61
SYVN1-203ENST00000377190 SPRR2EP22531 72 aa4.95□□□□□ -1.62
SYVN1-203ENST00000377190 SPRR2BP35325 72 aa4.95□□□□□ -1.62
SYVN1-203ENST00000377190 SPRR2AP35326 72 aa4.95□□□□□ -1.62
SYVN1-203ENST00000377190 MT1AP04731 61 aa4.88□□□□□ -1.63
SYVN1-203ENST00000377190 LCE3DQ9BYE3 92 aa4.85□□□□□ -1.63
SYVN1-203ENST00000377190 KRTAP9-7A8MTY7 169 aa4.78□□□□□ -1.64
SYVN1-203ENST00000377190 KRTAP5-9P26371 169 aa4.77□□□□□ -1.65
SYVN1-203ENST00000377190 LCE3EQ5T5B0 92 aa4.75□□□□□ -1.65
SYVN1-203ENST00000377190 KRTAP5-5Q701N2 237 aaPredicted RBP4.74□□□□□ -1.65
SYVN1-203ENST00000377190 SPRR2DP22532 72 aa4.71□□□□□ -1.66
SYVN1-203ENST00000377190 PRM1P04553 51 aa4.66□□□□□ -1.66
SYVN1-203ENST00000377190 KRTAP9-4Q9BYQ2 154 aa4.6□□□□□ -1.67
SYVN1-203ENST00000377190 KRTAP6-2Q3LI66 62 aa4.6□□□□□ -1.67
SYVN1-203ENST00000377190 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.47□□□□□ -1.69
SYVN1-203ENST00000377190 MT3P25713 68 aa4.41□□□□□ -1.7
SYVN1-203ENST00000377190 KRTAP6-3Q3LI67 103 aa4.37□□□□□ -1.71
SYVN1-203ENST00000377190 MT4P47944 62 aa4.33□□□□□ -1.72
SYVN1-203ENST00000377190 KRTAP4-6Q9BYQ5 205 aa4.28□□□□□ -1.72
SYVN1-203ENST00000377190 KRTAP9-6A0A140TA67 174 aa4.21□□□□□ -1.74
SYVN1-203ENST00000377190 NEBP20929 6669 aa4.16□□□□□ -1.74
SYVN1-203ENST00000377190 KRTAP5-4Q6L8H1 288 aa4.1□□□□□ -1.75
SYVN1-203ENST00000377190 HMCN1Q96RW7 5635 aa4.03□□□□□ -1.76
SYVN1-203ENST00000377190 KRTAP20-2Q3LI61 65 aa4.01□□□□□ -1.77
SYVN1-203ENST00000377190 KRTAP2-2Q9BYT5 123 aa3.98□□□□□ -1.77
SYVN1-203ENST00000377190 LCE1DQ5T752 114 aa3.94□□□□□ -1.78
SYVN1-203ENST00000377190 MUC5ACP98088 5654 aa3.85□□□□□ -1.79
SYVN1-203ENST00000377190 LCE4AQ5TA78 99 aa3.84□□□□□ -1.79
SYVN1-203ENST00000377190 LCE1BQ5T7P3 118 aa3.83□□□□□ -1.8
SYVN1-203ENST00000377190 KRTAP5-2Q701N4 177 aa3.83□□□□□ -1.8
SYVN1-203ENST00000377190 KRTAP5-3Q6L8H2 238 aa3.73□□□□□ -1.81
SYVN1-203ENST00000377190 KRTAP20-1Q3LI63 56 aa3.67□□□□□ -1.82
SYVN1-203ENST00000377190 KRTAP4-11Q9BYQ6 195 aa3.6□□□□□ -1.83
SYVN1-203ENST00000377190 KRTAP5-10Q6L8G5 202 aa3.47□□□□□ -1.85
SYVN1-203ENST00000377190 LCE1EQ5T753 118 aa3.43□□□□□ -1.86
SYVN1-203ENST00000377190 KRTAP4-2Q9BYR5 136 aa3.42□□□□□ -1.86
SYVN1-203ENST00000377190 MUC19Q7Z5P9 8384 aa3.35□□□□□ -1.87
SYVN1-203ENST00000377190 KRTAP5-1Q6L8H4 278 aa3.35□□□□□ -1.87
SYVN1-203ENST00000377190 LCE1CQ5T751 118 aa3.3□□□□□ -1.88
SYVN1-203ENST00000377190 KRTAP4-4Q9BYR3 166 aa3.25□□□□□ -1.89
SYVN1-203ENST00000377190 KRTAP21-2Q3LI59 83 aa3.2□□□□□ -1.9
SYVN1-203ENST00000377190 AHNAK2Q8IVF2 5795 aa3.18□□□□□ -1.9
SYVN1-203ENST00000377190 MUC5BQ9HC84 5762 aaPredicted RBP3.14□□□□□ -1.91
SYVN1-203ENST00000377190 KRTAP5-8O75690 187 aa3.13□□□□□ -1.91
SYVN1-203ENST00000377190 KRTAP4-12Q9BQ66 201 aa3.06□□□□□ -1.92
SYVN1-203ENST00000377190 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.01□□□□□ -1.93
SYVN1-203ENST00000377190 KRTAP5-7Q6L8G8 165 aa2.89□□□□□ -1.95
SYVN1-203ENST00000377190 KRTAP5-11Q6L8G4 156 aa2.81□□□□□ -1.96
SYVN1-203ENST00000377190 GPR98Q8WXG9 6306 aa2.74□□□□□ -1.97
SYVN1-203ENST00000377190 KRTAP21-1Q3LI58 79 aa2.74□□□□□ -1.97
SYVN1-203ENST00000377190 KRTAP9-9Q9BYP9 154 aa2.67□□□□□ -1.98
SYVN1-203ENST00000377190 LCE1FQ5T754 118 aa2.63□□□□□ -1.99
SYVN1-203ENST00000377190 PHGR1C9JFL3 82 aa2.48□□□□□ -2.01
SYVN1-203ENST00000377190 AHNAKQ09666 5890 aaKnown RBP2.32□□□□□ -2.04
SYVN1-203ENST00000377190 MUC16Q8WXI7 14507 aa1.65□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 6.2 ms