RNA–Protein interactions for RNA: ENST00000375608.7

MCF2L-204, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5 BASIC

Gene MCF2L, Length 3,648 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-204ENST00000375608 MT1GP13640 62 aa4.62□□□□□ -1.67
MCF2L-204ENST00000375608 KRTAP4-3Q9BYR4 195 aa4.61□□□□□ -1.67
MCF2L-204ENST00000375608 MT1LQ93083 61 aa4.59□□□□□ -1.67
MCF2L-204ENST00000375608 KRTAP12-4P60329 112 aa4.56□□□□□ -1.68
MCF2L-204ENST00000375608 LCE2DQ5TA82 110 aaPredicted RBP4.55□□□□□ -1.68
MCF2L-204ENST00000375608 KRTAP2-3P0C7H8 128 aa4.54□□□□□ -1.68
MCF2L-204ENST00000375608 KRTAP2-4Q9BYR9 128 aa4.54□□□□□ -1.68
MCF2L-204ENST00000375608 KRTAP2-1Q9BYU5 128 aa4.54□□□□□ -1.68
MCF2L-204ENST00000375608 SSPOA2VEC9 5147 aa4.54□□□□□ -1.68
MCF2L-204ENST00000375608 MUC12Q9UKN1 5478 aa4.54□□□□□ -1.68
MCF2L-204ENST00000375608 MT1EP04732 61 aa4.54□□□□□ -1.68
MCF2L-204ENST00000375608 SYNE2Q8WXH0 6885 aaKnown RBP4.46□□□□□ -1.7
MCF2L-204ENST00000375608 LCE3BQ5TA77 95 aa4.45□□□□□ -1.7
MCF2L-204ENST00000375608 SPRR2FQ96RM1 72 aa4.38□□□□□ -1.71
MCF2L-204ENST00000375608 KRTAP4-9Q9BYQ8 210 aa4.35□□□□□ -1.71
MCF2L-204ENST00000375608 MACF1Q9UPN3 7388 aaKnown RBP4.34□□□□□ -1.72
MCF2L-204ENST00000375608 MT1MQ8N339 61 aa4.28□□□□□ -1.72
MCF2L-204ENST00000375608 KRTAP19-6Q3LI70 58 aa4.27□□□□□ -1.73
MCF2L-204ENST00000375608 KRTAP19-4Q3LI73 84 aa4.27□□□□□ -1.73
MCF2L-204ENST00000375608 KRTAP19-3Q7Z4W3 81 aa4.26□□□□□ -1.73
MCF2L-204ENST00000375608 KRTAP9-7A8MTY7 169 aa4.19□□□□□ -1.74
MCF2L-204ENST00000375608 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.17□□□□□ -1.74
MCF2L-204ENST00000375608 MDN1Q9NU22 5596 aa4.14□□□□□ -1.75
MCF2L-204ENST00000375608 LCE3DQ9BYE3 92 aa4.12□□□□□ -1.75
MCF2L-204ENST00000375608 PRM1P04553 51 aa4.05□□□□□ -1.76
MCF2L-204ENST00000375608 LCE3EQ5T5B0 92 aa4.04□□□□□ -1.76
MCF2L-204ENST00000375608 SPRR2EP22531 72 aa3.99□□□□□ -1.77
MCF2L-204ENST00000375608 SPRR2BP35325 72 aa3.99□□□□□ -1.77
MCF2L-204ENST00000375608 SPRR2AP35326 72 aa3.99□□□□□ -1.77
MCF2L-204ENST00000375608 KRTAP6-1Q3LI64 71 aa3.99□□□□□ -1.77
MCF2L-204ENST00000375608 LCE5AQ5TCM9 118 aa3.92□□□□□ -1.78
MCF2L-204ENST00000375608 KRTAP6-3Q3LI67 103 aa3.88□□□□□ -1.79
MCF2L-204ENST00000375608 MT1AP04731 61 aa3.81□□□□□ -1.8
MCF2L-204ENST00000375608 LCE1AQ5T7P2 110 aa3.81□□□□□ -1.8
MCF2L-204ENST00000375608 SPRR2DP22532 72 aa3.81□□□□□ -1.8
MCF2L-204ENST00000375608 KRTAP6-2Q3LI66 62 aa3.75□□□□□ -1.81
MCF2L-204ENST00000375608 LCE1EQ5T753 118 aa3.75□□□□□ -1.81
MCF2L-204ENST00000375608 NEBP20929 6669 aa3.7□□□□□ -1.82
MCF2L-204ENST00000375608 KRTAP20-1Q3LI63 56 aa3.7□□□□□ -1.82
MCF2L-204ENST00000375608 KRTAP5-5Q701N2 237 aaPredicted RBP3.69□□□□□ -1.82
MCF2L-204ENST00000375608 MUC19Q7Z5P9 8384 aa3.61□□□□□ -1.83
MCF2L-204ENST00000375608 KRTAP5-9P26371 169 aa3.58□□□□□ -1.84
MCF2L-204ENST00000375608 MT3P25713 68 aa3.58□□□□□ -1.84
MCF2L-204ENST00000375608 KRTAP2-2Q9BYT5 123 aa3.58□□□□□ -1.84
MCF2L-204ENST00000375608 KRTAP9-4Q9BYQ2 154 aa3.56□□□□□ -1.84
MCF2L-204ENST00000375608 MT4P47944 62 aa3.53□□□□□ -1.84
MCF2L-204ENST00000375608 LCE1DQ5T752 114 aa3.51□□□□□ -1.85
MCF2L-204ENST00000375608 KRTAP4-6Q9BYQ5 205 aa3.28□□□□□ -1.88
MCF2L-204ENST00000375608 LCE1BQ5T7P3 118 aa3.26□□□□□ -1.89
MCF2L-204ENST00000375608 LCE1FQ5T754 118 aa3.19□□□□□ -1.9
MCF2L-204ENST00000375608 GPR98Q8WXG9 6306 aa3.18□□□□□ -1.9
MCF2L-204ENST00000375608 KRTAP4-11Q9BYQ6 195 aa3.12□□□□□ -1.91
MCF2L-204ENST00000375608 HMCN1Q96RW7 5635 aa3.09□□□□□ -1.92
MCF2L-204ENST00000375608 KRTAP20-2Q3LI61 65 aa3.03□□□□□ -1.92
MCF2L-204ENST00000375608 MUC5ACP98088 5654 aa3.03□□□□□ -1.92
MCF2L-204ENST00000375608 LCE4AQ5TA78 99 aa3.02□□□□□ -1.93
MCF2L-204ENST00000375608 KRTAP5-4Q6L8H1 288 aa2.94□□□□□ -1.94
MCF2L-204ENST00000375608 AHNAK2Q8IVF2 5795 aa2.87□□□□□ -1.95
MCF2L-204ENST00000375608 KRTAP5-10Q6L8G5 202 aa2.84□□□□□ -1.96
MCF2L-204ENST00000375608 KRTAP5-7Q6L8G8 165 aa2.79□□□□□ -1.96
MCF2L-204ENST00000375608 KRTAP5-3Q6L8H2 238 aa2.75□□□□□ -1.97
MCF2L-204ENST00000375608 KRTAP4-4Q9BYR3 166 aa2.73□□□□□ -1.97
MCF2L-204ENST00000375608 KRTAP5-2Q701N4 177 aa2.68□□□□□ -1.98
MCF2L-204ENST00000375608 MUC5BQ9HC84 5762 aaPredicted RBP2.67□□□□□ -1.98
MCF2L-204ENST00000375608 KRTAP4-12Q9BQ66 201 aa2.55□□□□□ -2
MCF2L-204ENST00000375608 KRTAP4-2Q9BYR5 136 aa2.55□□□□□ -2
MCF2L-204ENST00000375608 AHNAKQ09666 5890 aaKnown RBP2.48□□□□□ -2.01
MCF2L-204ENST00000375608 LCE1CQ5T751 118 aa2.47□□□□□ -2.01
MCF2L-204ENST00000375608 KRTAP5-1Q6L8H4 278 aa2.42□□□□□ -2.02
MCF2L-204ENST00000375608 KRTAP5-8O75690 187 aa2.4□□□□□ -2.02
MCF2L-204ENST00000375608 KRTAP9-9Q9BYP9 154 aa2.39□□□□□ -2.03
MCF2L-204ENST00000375608 KRTAP21-2Q3LI59 83 aa2.37□□□□□ -2.03
MCF2L-204ENST00000375608 KRTAP21-1Q3LI58 79 aa2.2□□□□□ -2.06
MCF2L-204ENST00000375608 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.09□□□□□ -2.07
MCF2L-204ENST00000375608 KRTAP5-11Q6L8G4 156 aa2.04□□□□□ -2.08
MCF2L-204ENST00000375608 PHGR1C9JFL3 82 aa1.78□□□□□ -2.12
MCF2L-204ENST00000375608 MUC16Q8WXI7 14507 aa1.23□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 34.7 ms