RNA–Protein interactions for RNA: ENST00000375604.6

MCF2L-203, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS P3 TSL 2 BASIC

Gene MCF2L, Length 6,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-203ENST00000375604 LCE1BQ5T7P3 118 aa5.32□□□□□ -1.56
MCF2L-203ENST00000375604 LCE1DQ5T752 114 aa5.27□□□□□ -1.57
MCF2L-203ENST00000375604 PRM1P04553 51 aa5.25□□□□□ -1.57
MCF2L-203ENST00000375604 EPPK1P58107 5090 aaKnown RBP5.23□□□□□ -1.57
MCF2L-203ENST00000375604 KRTAP19-6Q3LI70 58 aa5.23□□□□□ -1.57
MCF2L-203ENST00000375604 KRTAP4-9Q9BYQ8 210 aa5.21□□□□□ -1.58
MCF2L-203ENST00000375604 MT3P25713 68 aa5.17□□□□□ -1.58
MCF2L-203ENST00000375604 SYNE2Q8WXH0 6885 aaKnown RBP5.17□□□□□ -1.58
MCF2L-203ENST00000375604 FSIP2Q5CZC0 6907 aa5.16□□□□□ -1.58
MCF2L-203ENST00000375604 KRTAP9-6A0A140TA67 174 aa5.12□□□□□ -1.59
MCF2L-203ENST00000375604 HMCN2Q8NDA2 5059 aa5.02□□□□□ -1.61
MCF2L-203ENST00000375604 ABCA13Q86UQ4 5058 aa5□□□□□ -1.61
MCF2L-203ENST00000375604 FAT4Q6V0I7 4981 aa5□□□□□ -1.61
MCF2L-203ENST00000375604 LCE2AQ5TA79 106 aaPredicted RBP4.99□□□□□ -1.61
MCF2L-203ENST00000375604 KRTAP19-7Q3SYF9 63 aa4.99□□□□□ -1.61
MCF2L-203ENST00000375604 LCE5AQ5TCM9 118 aa4.96□□□□□ -1.62
MCF2L-203ENST00000375604 KRTAP20-1Q3LI63 56 aa4.92□□□□□ -1.62
MCF2L-203ENST00000375604 KRTAP2-3P0C7H8 128 aa4.86□□□□□ -1.63
MCF2L-203ENST00000375604 KRTAP2-4Q9BYR9 128 aa4.86□□□□□ -1.63
MCF2L-203ENST00000375604 KRTAP2-1Q9BYU5 128 aa4.86□□□□□ -1.63
MCF2L-203ENST00000375604 KRTAP9-7A8MTY7 169 aa4.85□□□□□ -1.63
MCF2L-203ENST00000375604 MT1AP04731 61 aa4.84□□□□□ -1.63
MCF2L-203ENST00000375604 KRTAP6-1Q3LI64 71 aa4.78□□□□□ -1.64
MCF2L-203ENST00000375604 RNF213Q63HN8 5207 aa4.78□□□□□ -1.64
MCF2L-203ENST00000375604 KRTAP6-2Q3LI66 62 aa4.77□□□□□ -1.65
MCF2L-203ENST00000375604 UBR4Q5T4S7 5183 aa4.74□□□□□ -1.65
MCF2L-203ENST00000375604 MUC2Q02817 5179 aa4.73□□□□□ -1.65
MCF2L-203ENST00000375604 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.66□□□□□ -1.66
MCF2L-203ENST00000375604 KRTAP9-6A8MVA2 160 aa4.66□□□□□ -1.66
MCF2L-203ENST00000375604 KRTAP6-3Q3LI67 103 aa4.61□□□□□ -1.67
MCF2L-203ENST00000375604 KRTAP9-4Q9BYQ2 154 aa4.6□□□□□ -1.67
MCF2L-203ENST00000375604 LCE1AQ5T7P2 110 aa4.57□□□□□ -1.68
MCF2L-203ENST00000375604 LCE1CQ5T751 118 aa4.56□□□□□ -1.68
MCF2L-203ENST00000375604 LCE1EQ5T753 118 aa4.56□□□□□ -1.68
MCF2L-203ENST00000375604 LCE1FQ5T754 118 aa4.56□□□□□ -1.68
MCF2L-203ENST00000375604 KRTAP2-2Q9BYT5 123 aa4.42□□□□□ -1.7
MCF2L-203ENST00000375604 LCE4AQ5TA78 99 aa4.41□□□□□ -1.7
MCF2L-203ENST00000375604 KMT2DO14686 5537 aa4.39□□□□□ -1.71
MCF2L-203ENST00000375604 SYNE1Q8NF91 8797 aaKnown RBP4.27□□□□□ -1.73
MCF2L-203ENST00000375604 OBSCNQ5VST9 7968 aa4.25□□□□□ -1.73
MCF2L-203ENST00000375604 MACF1Q9UPN3 7388 aaKnown RBP4.11□□□□□ -1.75
MCF2L-203ENST00000375604 FCGBPQ9Y6R7 5405 aaPredicted RBP4.09□□□□□ -1.76
MCF2L-203ENST00000375604 KRTAP4-6Q9BYQ5 205 aa4.08□□□□□ -1.76
MCF2L-203ENST00000375604 KRTAP9-9Q9BYP9 154 aa4.05□□□□□ -1.76
MCF2L-203ENST00000375604 USH2AO75445 5202 aa4.04□□□□□ -1.76
MCF2L-203ENST00000375604 DSTQ03001 7570 aaKnown RBP3.99□□□□□ -1.77
MCF2L-203ENST00000375604 KRTAP4-11Q9BYQ6 195 aa3.98□□□□□ -1.77
MCF2L-203ENST00000375604 SSPOA2VEC9 5147 aa3.92□□□□□ -1.78
MCF2L-203ENST00000375604 NEBP20929 6669 aa3.89□□□□□ -1.79
MCF2L-203ENST00000375604 KRTAP4-4Q9BYR3 166 aa3.89□□□□□ -1.79
MCF2L-203ENST00000375604 KRTAP4-12Q9BQ66 201 aa3.84□□□□□ -1.8
MCF2L-203ENST00000375604 KRTAP4-2Q9BYR5 136 aa3.84□□□□□ -1.8
MCF2L-203ENST00000375604 KRTAP20-2Q3LI61 65 aa3.81□□□□□ -1.8
MCF2L-203ENST00000375604 KRTAP5-9P26371 169 aa3.79□□□□□ -1.8
MCF2L-203ENST00000375604 MUC12Q9UKN1 5478 aa3.69□□□□□ -1.82
MCF2L-203ENST00000375604 KRTAP5-4Q6L8H1 288 aa3.45□□□□□ -1.86
MCF2L-203ENST00000375604 KRTAP5-5Q701N2 237 aaPredicted RBP3.41□□□□□ -1.86
MCF2L-203ENST00000375604 MUC19Q7Z5P9 8384 aa3.21□□□□□ -1.9
MCF2L-203ENST00000375604 MDN1Q9NU22 5596 aa3.17□□□□□ -1.9
MCF2L-203ENST00000375604 KRTAP5-3Q6L8H2 238 aa3.04□□□□□ -1.92
MCF2L-203ENST00000375604 GPR98Q8WXG9 6306 aa3.04□□□□□ -1.92
MCF2L-203ENST00000375604 MUC5ACP98088 5654 aa2.93□□□□□ -1.94
MCF2L-203ENST00000375604 KRTAP5-8O75690 187 aa2.91□□□□□ -1.94
MCF2L-203ENST00000375604 PHGR1C9JFL3 82 aa2.75□□□□□ -1.97
MCF2L-203ENST00000375604 HMCN1Q96RW7 5635 aa2.72□□□□□ -1.97
MCF2L-203ENST00000375604 KRTAP5-10Q6L8G5 202 aa2.65□□□□□ -1.99
MCF2L-203ENST00000375604 KRTAP5-2Q701N4 177 aa2.53□□□□□ -2
MCF2L-203ENST00000375604 KRTAP5-1Q6L8H4 278 aa2.48□□□□□ -2.01
MCF2L-203ENST00000375604 AHNAK2Q8IVF2 5795 aa2.42□□□□□ -2.02
MCF2L-203ENST00000375604 MUC5BQ9HC84 5762 aaPredicted RBP2.38□□□□□ -2.03
MCF2L-203ENST00000375604 KRTAP21-2Q3LI59 83 aa2.29□□□□□ -2.04
MCF2L-203ENST00000375604 KRTAP5-11Q6L8G4 156 aa2.27□□□□□ -2.05
MCF2L-203ENST00000375604 AHNAKQ09666 5890 aaKnown RBP2.11□□□□□ -2.07
MCF2L-203ENST00000375604 KRTAP21-1Q3LI58 79 aa1.98□□□□□ -2.09
MCF2L-203ENST00000375604 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.93□□□□□ -2.1
MCF2L-203ENST00000375604 KRTAP5-7Q6L8G8 165 aa1.89□□□□□ -2.11
MCF2L-203ENST00000375604 MUC16Q8WXI7 14507 aa1.62□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 12.5 ms