RNA–Protein interactions for RNA: ENST00000375549.7

SDHD-201, Transcript of succinate dehydrogenase complex subunit D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDHD, Length 1,439 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-201ENST00000375549 A0A0A0MQY5 61 aa4.89□□□□□ -1.63
SDHD-201ENST00000375549 TNP1P09430 55 aa4.89□□□□□ -1.63
SDHD-201ENST00000375549 KRTAP10-12P60413 245 aa4.85□□□□□ -1.63
SDHD-201ENST00000375549 KRTAP25-1Q3LHN0 102 aa4.84□□□□□ -1.63
SDHD-201ENST00000375549 LCE1AQ5T7P2 110 aa4.81□□□□□ -1.64
SDHD-201ENST00000375549 KTN1-AS1Q86SY8 53 aa4.76□□□□□ -1.65
SDHD-201ENST00000375549 NEBP20929 6669 aa4.74□□□□□ -1.65
SDHD-201ENST00000375549 KRTAP6-3Q3LI67 103 aa4.73□□□□□ -1.65
SDHD-201ENST00000375549 KMT2DO14686 5537 aa4.73□□□□□ -1.65
SDHD-201ENST00000375549 LCE3AQ5TA76 89 aa4.72□□□□□ -1.65
SDHD-201ENST00000375549 KRTAP8-1Q8IUC2 63 aa4.71□□□□□ -1.66
SDHD-201ENST00000375549 PRAC1Q96KF2 57 aa4.63□□□□□ -1.67
SDHD-201ENST00000375549 PP632Q6XCG6 107 aa4.62□□□□□ -1.67
SDHD-201ENST00000375549 KRTAP20-1Q3LI63 56 aa4.61□□□□□ -1.67
SDHD-201ENST00000375549 LCE1EQ5T753 118 aa4.61□□□□□ -1.67
SDHD-201ENST00000375549 KRTAP19-5Q3LI72 72 aa4.6□□□□□ -1.67
SDHD-201ENST00000375549 SPRR2FQ96RM1 72 aa4.57□□□□□ -1.68
SDHD-201ENST00000375549 KRTAP19-7Q3SYF9 63 aa4.56□□□□□ -1.68
SDHD-201ENST00000375549 KRTAP5-9P26371 169 aa4.55□□□□□ -1.68
SDHD-201ENST00000375549 KRTAP2-2Q9BYT5 123 aa4.55□□□□□ -1.68
SDHD-201ENST00000375549 MUC12Q9UKN1 5478 aa4.54□□□□□ -1.68
SDHD-201ENST00000375549 KRTAP12-3P60328 96 aa4.54□□□□□ -1.68
SDHD-201ENST00000375549 MT1EP04732 61 aa4.5□□□□□ -1.69
SDHD-201ENST00000375549 KRTAP5-1Q6L8H4 278 aa4.44□□□□□ -1.7
SDHD-201ENST00000375549 SPRR2EP22531 72 aa4.4□□□□□ -1.7
SDHD-201ENST00000375549 SPRR2BP35325 72 aa4.4□□□□□ -1.7
SDHD-201ENST00000375549 SPRR2AP35326 72 aa4.4□□□□□ -1.7
SDHD-201ENST00000375549 MDN1Q9NU22 5596 aa4.39□□□□□ -1.71
SDHD-201ENST00000375549 MT1LQ93083 61 aa4.38□□□□□ -1.71
SDHD-201ENST00000375549 KRTAP2-3P0C7H8 128 aa4.38□□□□□ -1.71
SDHD-201ENST00000375549 MT3P25713 68 aa4.38□□□□□ -1.71
SDHD-201ENST00000375549 KRTAP2-4Q9BYR9 128 aa4.38□□□□□ -1.71
SDHD-201ENST00000375549 KRTAP5-4Q6L8H1 288 aa4.37□□□□□ -1.71
SDHD-201ENST00000375549 KRTAP19-3Q7Z4W3 81 aa4.37□□□□□ -1.71
SDHD-201ENST00000375549 MT1GP13640 62 aa4.3□□□□□ -1.72
SDHD-201ENST00000375549 KRTAP4-4Q9BYR3 166 aa4.28□□□□□ -1.72
SDHD-201ENST00000375549 MT1MQ8N339 61 aa4.26□□□□□ -1.73
SDHD-201ENST00000375549 SPRR2DP22532 72 aa4.24□□□□□ -1.73
SDHD-201ENST00000375549 LCE3CQ5T5A8 94 aa4.22□□□□□ -1.73
SDHD-201ENST00000375549 GPR98Q8WXG9 6306 aa4.22□□□□□ -1.73
SDHD-201ENST00000375549 KRTAP2-1Q9BYU5 128 aa4.21□□□□□ -1.74
SDHD-201ENST00000375549 KRTAP4-3Q9BYR4 195 aa4.18□□□□□ -1.74
SDHD-201ENST00000375549 DSTQ03001 7570 aaKnown RBP4.04□□□□□ -1.76
SDHD-201ENST00000375549 SPRR5A0A1B0GTR4 108 aa3.99□□□□□ -1.77
SDHD-201ENST00000375549 KRTAP9-6A8MVA2 160 aa3.97□□□□□ -1.77
SDHD-201ENST00000375549 LCE1FQ5T754 118 aa3.95□□□□□ -1.78
SDHD-201ENST00000375549 NDUFAF8A1L188 74 aa3.89□□□□□ -1.79
SDHD-201ENST00000375549 KRTAP5-5Q701N2 237 aaPredicted RBP3.84□□□□□ -1.79
SDHD-201ENST00000375549 LUZP6Q538Z0 58 aa3.79□□□□□ -1.8
SDHD-201ENST00000375549 OBSCNQ5VST9 7968 aa3.74□□□□□ -1.81
SDHD-201ENST00000375549 KRTAP5-2Q701N4 177 aa3.74□□□□□ -1.81
SDHD-201ENST00000375549 MT1AP04731 61 aa3.72□□□□□ -1.81
SDHD-201ENST00000375549 KRTAP6-1Q3LI64 71 aa3.7□□□□□ -1.82
SDHD-201ENST00000375549 MT4P47944 62 aa3.7□□□□□ -1.82
SDHD-201ENST00000375549 HMCN1Q96RW7 5635 aa3.69□□□□□ -1.82
SDHD-201ENST00000375549 KRTAP12-4P60329 112 aa3.64□□□□□ -1.83
SDHD-201ENST00000375549 AHNAK2Q8IVF2 5795 aa3.64□□□□□ -1.83
SDHD-201ENST00000375549 SYNE1Q8NF91 8797 aaKnown RBP3.62□□□□□ -1.83
SDHD-201ENST00000375549 KRTAP5-10Q6L8G5 202 aa3.61□□□□□ -1.83
SDHD-201ENST00000375549 KRTAP5-7Q6L8G8 165 aa3.55□□□□□ -1.84
SDHD-201ENST00000375549 KRTAP20-2Q3LI61 65 aa3.53□□□□□ -1.84
SDHD-201ENST00000375549 KRTAP6-2Q3LI66 62 aa3.44□□□□□ -1.86
SDHD-201ENST00000375549 LCE3EQ5T5B0 92 aa3.43□□□□□ -1.86
SDHD-201ENST00000375549 KRTAP5-8O75690 187 aa3.27□□□□□ -1.89
SDHD-201ENST00000375549 AHNAKQ09666 5890 aaKnown RBP3.22□□□□□ -1.89
SDHD-201ENST00000375549 LCE3DQ9BYE3 92 aa3.14□□□□□ -1.91
SDHD-201ENST00000375549 MUC5ACP98088 5654 aa3.12□□□□□ -1.91
SDHD-201ENST00000375549 INE1O15225 51 aa3.07□□□□□ -1.92
SDHD-201ENST00000375549 MUC5BQ9HC84 5762 aaPredicted RBP3.07□□□□□ -1.92
SDHD-201ENST00000375549 LCE1CQ5T751 118 aa2.96□□□□□ -1.94
SDHD-201ENST00000375549 LCE1BQ5T7P3 118 aa2.96□□□□□ -1.94
SDHD-201ENST00000375549 PRM1P04553 51 aa2.56□□□□□ -2
SDHD-201ENST00000375549 MUC19Q7Z5P9 8384 aa2.43□□□□□ -2.02
SDHD-201ENST00000375549 KRTAP21-2Q3LI59 83 aa2.42□□□□□ -2.02
SDHD-201ENST00000375549 PHGR1C9JFL3 82 aa2.14□□□□□ -2.07
SDHD-201ENST00000375549 KRTAP21-1Q3LI58 79 aa1.65□□□□□ -2.15
SDHD-201ENST00000375549 MUC16Q8WXI7 14507 aa1.34□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 131 ms