RNA–Protein interactions for RNA: ENST00000375441.7

CUL4A-203, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 4,037 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-203ENST00000375441 MT1GP13640 62 aa4.38□□□□□ -1.71
CUL4A-203ENST00000375441 SYNE1Q8NF91 8797 aaKnown RBP4.37□□□□□ -1.71
CUL4A-203ENST00000375441 KRTAP2-3P0C7H8 128 aa4.31□□□□□ -1.72
CUL4A-203ENST00000375441 KRTAP2-4Q9BYR9 128 aa4.31□□□□□ -1.72
CUL4A-203ENST00000375441 KRTAP2-1Q9BYU5 128 aa4.31□□□□□ -1.72
CUL4A-203ENST00000375441 KRTAP9-2Q9BYQ4 174 aa4.3□□□□□ -1.72
CUL4A-203ENST00000375441 FCGBPQ9Y6R7 5405 aaPredicted RBP4.29□□□□□ -1.72
CUL4A-203ENST00000375441 SSPOA2VEC9 5147 aa4.28□□□□□ -1.72
CUL4A-203ENST00000375441 LOC100996750A0A140TA64 210 aa4.27□□□□□ -1.73
CUL4A-203ENST00000375441 KRTAP4-3Q9BYR4 195 aa4.27□□□□□ -1.73
CUL4A-203ENST00000375441 KRTAP19-6Q3LI70 58 aa4.26□□□□□ -1.73
CUL4A-203ENST00000375441 KRTAP12-4P60329 112 aa4.26□□□□□ -1.73
CUL4A-203ENST00000375441 MUC12Q9UKN1 5478 aa4.21□□□□□ -1.74
CUL4A-203ENST00000375441 KRTAP19-3Q7Z4W3 81 aa4.21□□□□□ -1.74
CUL4A-203ENST00000375441 LCE3BQ5TA77 95 aa4.2□□□□□ -1.74
CUL4A-203ENST00000375441 MT1MQ8N339 61 aa4.17□□□□□ -1.74
CUL4A-203ENST00000375441 SYNE2Q8WXH0 6885 aaKnown RBP4.16□□□□□ -1.74
CUL4A-203ENST00000375441 SPRR2EP22531 72 aa4.15□□□□□ -1.75
CUL4A-203ENST00000375441 SPRR2BP35325 72 aa4.15□□□□□ -1.75
CUL4A-203ENST00000375441 SPRR2AP35326 72 aa4.15□□□□□ -1.75
CUL4A-203ENST00000375441 MACF1Q9UPN3 7388 aaKnown RBP4.14□□□□□ -1.75
CUL4A-203ENST00000375441 SPRR2DP22532 72 aa3.97□□□□□ -1.77
CUL4A-203ENST00000375441 LCE3DQ9BYE3 92 aa3.96□□□□□ -1.78
CUL4A-203ENST00000375441 KRTAP4-9Q9BYQ8 210 aa3.94□□□□□ -1.78
CUL4A-203ENST00000375441 KRTAP9-6A0A140TA67 174 aa3.91□□□□□ -1.78
CUL4A-203ENST00000375441 LCE3EQ5T5B0 92 aa3.9□□□□□ -1.78
CUL4A-203ENST00000375441 LCE5AQ5TCM9 118 aa3.86□□□□□ -1.79
CUL4A-203ENST00000375441 MDN1Q9NU22 5596 aa3.83□□□□□ -1.8
CUL4A-203ENST00000375441 KRTAP6-1Q3LI64 71 aa3.79□□□□□ -1.8
CUL4A-203ENST00000375441 MT1AP04731 61 aa3.78□□□□□ -1.8
CUL4A-203ENST00000375441 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.77□□□□□ -1.81
CUL4A-203ENST00000375441 PRM1P04553 51 aa3.75□□□□□ -1.81
CUL4A-203ENST00000375441 LCE1AQ5T7P2 110 aa3.74□□□□□ -1.81
CUL4A-203ENST00000375441 KRTAP9-7A8MTY7 169 aa3.69□□□□□ -1.82
CUL4A-203ENST00000375441 MT4P47944 62 aa3.65□□□□□ -1.82
CUL4A-203ENST00000375441 KRTAP6-3Q3LI67 103 aa3.62□□□□□ -1.83
CUL4A-203ENST00000375441 MT3P25713 68 aa3.58□□□□□ -1.84
CUL4A-203ENST00000375441 KRTAP9-4Q9BYQ2 154 aa3.52□□□□□ -1.85
CUL4A-203ENST00000375441 KRTAP6-2Q3LI66 62 aa3.51□□□□□ -1.85
CUL4A-203ENST00000375441 KRTAP5-9P26371 169 aa3.51□□□□□ -1.85
CUL4A-203ENST00000375441 KRTAP5-5Q701N2 237 aaPredicted RBP3.38□□□□□ -1.87
CUL4A-203ENST00000375441 NEBP20929 6669 aa3.37□□□□□ -1.87
CUL4A-203ENST00000375441 MUC19Q7Z5P9 8384 aa3.34□□□□□ -1.87
CUL4A-203ENST00000375441 KRTAP20-1Q3LI63 56 aa3.33□□□□□ -1.88
CUL4A-203ENST00000375441 KRTAP2-2Q9BYT5 123 aa3.27□□□□□ -1.89
CUL4A-203ENST00000375441 LCE1DQ5T752 114 aa3.26□□□□□ -1.89
CUL4A-203ENST00000375441 KRTAP4-6Q9BYQ5 205 aa3.24□□□□□ -1.89
CUL4A-203ENST00000375441 LCE1BQ5T7P3 118 aa3.21□□□□□ -1.9
CUL4A-203ENST00000375441 LCE4AQ5TA78 99 aa3.21□□□□□ -1.9
CUL4A-203ENST00000375441 LCE1EQ5T753 118 aa3.06□□□□□ -1.92
CUL4A-203ENST00000375441 KRTAP20-2Q3LI61 65 aa3.03□□□□□ -1.93
CUL4A-203ENST00000375441 LCE1FQ5T754 118 aa3.01□□□□□ -1.93
CUL4A-203ENST00000375441 KRTAP9-9Q9BYP9 154 aa3.01□□□□□ -1.93
CUL4A-203ENST00000375441 HMCN1Q96RW7 5635 aa2.96□□□□□ -1.93
CUL4A-203ENST00000375441 MUC5ACP98088 5654 aa2.91□□□□□ -1.94
CUL4A-203ENST00000375441 KRTAP5-4Q6L8H1 288 aa2.87□□□□□ -1.95
CUL4A-203ENST00000375441 GPR98Q8WXG9 6306 aa2.85□□□□□ -1.95
CUL4A-203ENST00000375441 KRTAP4-11Q9BYQ6 195 aa2.84□□□□□ -1.96
CUL4A-203ENST00000375441 KRTAP5-2Q701N4 177 aa2.66□□□□□ -1.98
CUL4A-203ENST00000375441 AHNAK2Q8IVF2 5795 aa2.6□□□□□ -1.99
CUL4A-203ENST00000375441 KRTAP5-3Q6L8H2 238 aa2.59□□□□□ -1.99
CUL4A-203ENST00000375441 KRTAP5-10Q6L8G5 202 aa2.56□□□□□ -2
CUL4A-203ENST00000375441 KRTAP4-12Q9BQ66 201 aa2.52□□□□□ -2.01
CUL4A-203ENST00000375441 KRTAP4-2Q9BYR5 136 aa2.52□□□□□ -2.01
CUL4A-203ENST00000375441 KRTAP4-4Q9BYR3 166 aa2.5□□□□□ -2.01
CUL4A-203ENST00000375441 LCE1CQ5T751 118 aa2.48□□□□□ -2.01
CUL4A-203ENST00000375441 MUC5BQ9HC84 5762 aaPredicted RBP2.42□□□□□ -2.02
CUL4A-203ENST00000375441 KRTAP5-8O75690 187 aa2.41□□□□□ -2.02
CUL4A-203ENST00000375441 KRTAP5-1Q6L8H4 278 aa2.34□□□□□ -2.04
CUL4A-203ENST00000375441 KRTAP5-7Q6L8G8 165 aa2.3□□□□□ -2.04
CUL4A-203ENST00000375441 KRTAP21-2Q3LI59 83 aa2.27□□□□□ -2.05
CUL4A-203ENST00000375441 AHNAKQ09666 5890 aaKnown RBP2.16□□□□□ -2.06
CUL4A-203ENST00000375441 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.15□□□□□ -2.07
CUL4A-203ENST00000375441 KRTAP5-11Q6L8G4 156 aa2.08□□□□□ -2.08
CUL4A-203ENST00000375441 KRTAP21-1Q3LI58 79 aa2.07□□□□□ -2.08
CUL4A-203ENST00000375441 PHGR1C9JFL3 82 aa1.79□□□□□ -2.12
CUL4A-203ENST00000375441 MUC16Q8WXI7 14507 aa1.18□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 60.7 ms