RNA–Protein interactions for RNA: ENST00000375238.8

NECAB3-202, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NECAB3, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-202ENST00000375238 SPRR2FQ96RM1 72 aa6.83□□□□□ -1.32
NECAB3-202ENST00000375238 SYNE2Q8WXH0 6885 aaKnown RBP6.76□□□□□ -1.33
NECAB3-202ENST00000375238 KRTAP19-4Q3LI73 84 aa6.71□□□□□ -1.34
NECAB3-202ENST00000375238 KRTAP9-6A8MVA2 160 aa6.7□□□□□ -1.34
NECAB3-202ENST00000375238 MUC12Q9UKN1 5478 aa6.69□□□□□ -1.34
NECAB3-202ENST00000375238 KRTAP4-7Q9BYR0 210 aa6.69□□□□□ -1.34
NECAB3-202ENST00000375238 KRTAP19-3Q7Z4W3 81 aa6.68□□□□□ -1.34
NECAB3-202ENST00000375238 KRTAP5-9P26371 169 aa6.68□□□□□ -1.34
NECAB3-202ENST00000375238 KRTAP9-7A8MTY7 169 aa6.62□□□□□ -1.35
NECAB3-202ENST00000375238 MT1GP13640 62 aa6.62□□□□□ -1.35
NECAB3-202ENST00000375238 KRTAP6-3Q3LI67 103 aa6.6□□□□□ -1.35
NECAB3-202ENST00000375238 INE1O15225 51 aa6.57□□□□□ -1.36
NECAB3-202ENST00000375238 MT1MQ8N339 61 aa6.56□□□□□ -1.36
NECAB3-202ENST00000375238 LCE5AQ5TCM9 118 aa6.55□□□□□ -1.36
NECAB3-202ENST00000375238 LCE1AQ5T7P2 110 aa6.5□□□□□ -1.37
NECAB3-202ENST00000375238 KRTAP4-3Q9BYR4 195 aa6.47□□□□□ -1.37
NECAB3-202ENST00000375238 SPRR2EP22531 72 aa6.46□□□□□ -1.37
NECAB3-202ENST00000375238 SPRR2BP35325 72 aa6.46□□□□□ -1.37
NECAB3-202ENST00000375238 SPRR2AP35326 72 aa6.46□□□□□ -1.37
NECAB3-202ENST00000375238 MDN1Q9NU22 5596 aa6.39□□□□□ -1.39
NECAB3-202ENST00000375238 KRTAP2-3P0C7H8 128 aa6.39□□□□□ -1.39
NECAB3-202ENST00000375238 KRTAP2-4Q9BYR9 128 aa6.39□□□□□ -1.39
NECAB3-202ENST00000375238 KRTAP2-1Q9BYU5 128 aa6.39□□□□□ -1.39
NECAB3-202ENST00000375238 LOC100996750A0A140TA64 210 aa6.25□□□□□ -1.41
NECAB3-202ENST00000375238 SPRR2DP22532 72 aa6.23□□□□□ -1.41
NECAB3-202ENST00000375238 DSTQ03001 7570 aaKnown RBP6.18□□□□□ -1.42
NECAB3-202ENST00000375238 NEBP20929 6669 aa6.17□□□□□ -1.42
NECAB3-202ENST00000375238 LCE3BQ5TA77 95 aa5.97□□□□□ -1.45
NECAB3-202ENST00000375238 KRTAP5-5Q701N2 237 aaPredicted RBP5.88□□□□□ -1.47
NECAB3-202ENST00000375238 KRTAP20-1Q3LI63 56 aa5.84□□□□□ -1.47
NECAB3-202ENST00000375238 MT1AP04731 61 aa5.8□□□□□ -1.48
NECAB3-202ENST00000375238 KRTAP6-1Q3LI64 71 aa5.77□□□□□ -1.49
NECAB3-202ENST00000375238 KRTAP2-2Q9BYT5 123 aa5.7□□□□□ -1.5
NECAB3-202ENST00000375238 KRTAP5-4Q6L8H1 288 aa5.59□□□□□ -1.51
NECAB3-202ENST00000375238 LCE4AQ5TA78 99 aa5.56□□□□□ -1.52
NECAB3-202ENST00000375238 KRTAP12-4P60329 112 aa5.54□□□□□ -1.52
NECAB3-202ENST00000375238 SYNE1Q8NF91 8797 aaKnown RBP5.53□□□□□ -1.52
NECAB3-202ENST00000375238 KRTAP4-6Q9BYQ5 205 aa5.52□□□□□ -1.53
NECAB3-202ENST00000375238 KRTAP4-9Q9BYQ8 210 aa5.52□□□□□ -1.53
NECAB3-202ENST00000375238 KRTAP9-4Q9BYQ2 154 aa5.5□□□□□ -1.53
NECAB3-202ENST00000375238 KRTAP4-12Q9BQ66 201 aa5.47□□□□□ -1.53
NECAB3-202ENST00000375238 MT4P47944 62 aa5.42□□□□□ -1.54
NECAB3-202ENST00000375238 KRTAP9-9Q9BYP9 154 aa5.42□□□□□ -1.54
NECAB3-202ENST00000375238 KRTAP6-2Q3LI66 62 aa5.31□□□□□ -1.56
NECAB3-202ENST00000375238 LCE3DQ9BYE3 92 aa5.31□□□□□ -1.56
NECAB3-202ENST00000375238 LCE1DQ5T752 114 aa5.29□□□□□ -1.56
NECAB3-202ENST00000375238 MT3P25713 68 aa5.25□□□□□ -1.57
NECAB3-202ENST00000375238 KRTAP20-2Q3LI61 65 aa5.25□□□□□ -1.57
NECAB3-202ENST00000375238 LCE3EQ5T5B0 92 aa5.22□□□□□ -1.57
NECAB3-202ENST00000375238 HMCN1Q96RW7 5635 aa5.17□□□□□ -1.58
NECAB3-202ENST00000375238 KRTAP5-2Q701N4 177 aa5.08□□□□□ -1.6
NECAB3-202ENST00000375238 KRTAP5-3Q6L8H2 238 aa5.03□□□□□ -1.6
NECAB3-202ENST00000375238 PRM1P04553 51 aa4.87□□□□□ -1.63
NECAB3-202ENST00000375238 OBSCNQ5VST9 7968 aa4.82□□□□□ -1.64
NECAB3-202ENST00000375238 AHNAK2Q8IVF2 5795 aa4.69□□□□□ -1.66
NECAB3-202ENST00000375238 KRTAP4-11Q9BYQ6 195 aa4.58□□□□□ -1.68
NECAB3-202ENST00000375238 KRTAP5-10Q6L8G5 202 aa4.54□□□□□ -1.68
NECAB3-202ENST00000375238 LCE1EQ5T753 118 aa4.52□□□□□ -1.69
NECAB3-202ENST00000375238 GPR98Q8WXG9 6306 aa4.49□□□□□ -1.69
NECAB3-202ENST00000375238 KRTAP5-1Q6L8H4 278 aa4.39□□□□□ -1.71
NECAB3-202ENST00000375238 KRTAP5-8O75690 187 aa4.36□□□□□ -1.71
NECAB3-202ENST00000375238 KRTAP4-2Q9BYR5 136 aa4.36□□□□□ -1.71
NECAB3-202ENST00000375238 LCE1BQ5T7P3 118 aa4.32□□□□□ -1.72
NECAB3-202ENST00000375238 KRTAP5-7Q6L8G8 165 aa4.26□□□□□ -1.73
NECAB3-202ENST00000375238 LCE1FQ5T754 118 aa4.25□□□□□ -1.73
NECAB3-202ENST00000375238 MUC5ACP98088 5654 aa4.23□□□□□ -1.73
NECAB3-202ENST00000375238 LCE1CQ5T751 118 aa4.22□□□□□ -1.73
NECAB3-202ENST00000375238 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.94□□□□□ -1.78
NECAB3-202ENST00000375238 MUC5BQ9HC84 5762 aaPredicted RBP3.78□□□□□ -1.8
NECAB3-202ENST00000375238 KRTAP21-2Q3LI59 83 aa3.76□□□□□ -1.81
NECAB3-202ENST00000375238 KRTAP5-11Q6L8G4 156 aa3.72□□□□□ -1.81
NECAB3-202ENST00000375238 AHNAKQ09666 5890 aaKnown RBP3.63□□□□□ -1.83
NECAB3-202ENST00000375238 KRTAP4-4Q9BYR3 166 aa3.39□□□□□ -1.87
NECAB3-202ENST00000375238 PHGR1C9JFL3 82 aa3.2□□□□□ -1.9
NECAB3-202ENST00000375238 KRTAP21-1Q3LI58 79 aa3.07□□□□□ -1.92
NECAB3-202ENST00000375238 MUC19Q7Z5P9 8384 aa2.94□□□□□ -1.94
NECAB3-202ENST00000375238 MUC16Q8WXI7 14507 aa2.04□□□□□ -2.08
Retrieved 77 of 20,778 RNA–protein pairs in 116.5 ms