RNA–Protein interactions for RNA: ENST00000373571.5

HDAC8-206, Transcript of histone deacetylase 8, humanhuman

TSL 5 BASIC

Gene HDAC8, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-206ENST00000373571 SSPOA2VEC9 5147 aa5.93□□□□□ -1.46
HDAC8-206ENST00000373571 LCE1DQ5T752 114 aa5.92□□□□□ -1.46
HDAC8-206ENST00000373571 KRTAP4-2Q9BYR5 136 aa5.91□□□□□ -1.46
HDAC8-206ENST00000373571 KRTAP9-6A8MVA2 160 aa5.86□□□□□ -1.47
HDAC8-206ENST00000373571 KRTAP4-9Q9BYQ8 210 aa5.86□□□□□ -1.47
HDAC8-206ENST00000373571 INE1O15225 51 aa5.84□□□□□ -1.47
HDAC8-206ENST00000373571 MT1EP04732 61 aa5.84□□□□□ -1.47
HDAC8-206ENST00000373571 KRTAP19-6Q3LI70 58 aa5.84□□□□□ -1.47
HDAC8-206ENST00000373571 MT1LQ93083 61 aa5.83□□□□□ -1.48
HDAC8-206ENST00000373571 KRTAP19-4Q3LI73 84 aa5.81□□□□□ -1.48
HDAC8-206ENST00000373571 FSIP2Q5CZC0 6907 aa5.66□□□□□ -1.5
HDAC8-206ENST00000373571 KRTAP2-3P0C7H8 128 aa5.63□□□□□ -1.51
HDAC8-206ENST00000373571 KRTAP2-4Q9BYR9 128 aa5.63□□□□□ -1.51
HDAC8-206ENST00000373571 KRTAP2-1Q9BYU5 128 aa5.63□□□□□ -1.51
HDAC8-206ENST00000373571 KRTAP4-3Q9BYR4 195 aa5.5□□□□□ -1.53
HDAC8-206ENST00000373571 FCGBPQ9Y6R7 5405 aaPredicted RBP5.5□□□□□ -1.53
HDAC8-206ENST00000373571 KRTAP4-11Q9BYQ6 195 aa5.49□□□□□ -1.53
HDAC8-206ENST00000373571 KRTAP19-3Q7Z4W3 81 aa5.48□□□□□ -1.53
HDAC8-206ENST00000373571 MT1MQ8N339 61 aa5.47□□□□□ -1.53
HDAC8-206ENST00000373571 MT1GP13640 62 aa5.46□□□□□ -1.54
HDAC8-206ENST00000373571 MUC12Q9UKN1 5478 aa5.41□□□□□ -1.54
HDAC8-206ENST00000373571 CRCT1Q9UGL9 99 aa5.38□□□□□ -1.55
HDAC8-206ENST00000373571 SPRR2FQ96RM1 72 aa5.33□□□□□ -1.56
HDAC8-206ENST00000373571 LCE5AQ5TCM9 118 aa5.3□□□□□ -1.56
HDAC8-206ENST00000373571 MACF1Q9UPN3 7388 aaKnown RBP5.23□□□□□ -1.57
HDAC8-206ENST00000373571 DSTQ03001 7570 aaKnown RBP5.17□□□□□ -1.58
HDAC8-206ENST00000373571 SYNE2Q8WXH0 6885 aaKnown RBP5.01□□□□□ -1.61
HDAC8-206ENST00000373571 KRTAP9-7A8MTY7 169 aa5□□□□□ -1.61
HDAC8-206ENST00000373571 KRTAP5-9P26371 169 aa4.99□□□□□ -1.61
HDAC8-206ENST00000373571 LCE1AQ5T7P2 110 aa4.98□□□□□ -1.61
HDAC8-206ENST00000373571 KRTAP12-4P60329 112 aa4.95□□□□□ -1.62
HDAC8-206ENST00000373571 KRTAP6-1Q3LI64 71 aa4.94□□□□□ -1.62
HDAC8-206ENST00000373571 MDN1Q9NU22 5596 aa4.93□□□□□ -1.62
HDAC8-206ENST00000373571 MT1AP04731 61 aa4.9□□□□□ -1.62
HDAC8-206ENST00000373571 SPRR2EP22531 72 aa4.88□□□□□ -1.63
HDAC8-206ENST00000373571 SPRR2BP35325 72 aa4.88□□□□□ -1.63
HDAC8-206ENST00000373571 SPRR2AP35326 72 aa4.88□□□□□ -1.63
HDAC8-206ENST00000373571 KRTAP5-5Q701N2 237 aaPredicted RBP4.84□□□□□ -1.63
HDAC8-206ENST00000373571 SYNE1Q8NF91 8797 aaKnown RBP4.8□□□□□ -1.64
HDAC8-206ENST00000373571 LCE3DQ9BYE3 92 aa4.69□□□□□ -1.66
HDAC8-206ENST00000373571 SPRR2DP22532 72 aa4.67□□□□□ -1.66
HDAC8-206ENST00000373571 KRTAP6-3Q3LI67 103 aa4.67□□□□□ -1.66
HDAC8-206ENST00000373571 LCE3EQ5T5B0 92 aa4.62□□□□□ -1.67
HDAC8-206ENST00000373571 LCE4AQ5TA78 99 aa4.57□□□□□ -1.68
HDAC8-206ENST00000373571 NEBP20929 6669 aa4.51□□□□□ -1.69
HDAC8-206ENST00000373571 KRTAP6-2Q3LI66 62 aa4.44□□□□□ -1.7
HDAC8-206ENST00000373571 MT3P25713 68 aa4.41□□□□□ -1.7
HDAC8-206ENST00000373571 KRTAP20-1Q3LI63 56 aa4.39□□□□□ -1.71
HDAC8-206ENST00000373571 PRM1P04553 51 aa4.37□□□□□ -1.71
HDAC8-206ENST00000373571 KRTAP5-4Q6L8H1 288 aa4.3□□□□□ -1.72
HDAC8-206ENST00000373571 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.28□□□□□ -1.72
HDAC8-206ENST00000373571 OBSCNQ5VST9 7968 aa4.19□□□□□ -1.74
HDAC8-206ENST00000373571 MT4P47944 62 aa4.1□□□□□ -1.75
HDAC8-206ENST00000373571 KRTAP2-2Q9BYT5 123 aa4.1□□□□□ -1.75
HDAC8-206ENST00000373571 KRTAP20-2Q3LI61 65 aa4.04□□□□□ -1.76
HDAC8-206ENST00000373571 KRTAP5-2Q701N4 177 aa4.01□□□□□ -1.77
HDAC8-206ENST00000373571 GPR98Q8WXG9 6306 aa3.88□□□□□ -1.79
HDAC8-206ENST00000373571 HMCN1Q96RW7 5635 aa3.87□□□□□ -1.79
HDAC8-206ENST00000373571 MUC5ACP98088 5654 aa3.65□□□□□ -1.83
HDAC8-206ENST00000373571 KRTAP5-11Q6L8G4 156 aa3.64□□□□□ -1.83
HDAC8-206ENST00000373571 LCE1EQ5T753 118 aa3.62□□□□□ -1.83
HDAC8-206ENST00000373571 LCE1BQ5T7P3 118 aa3.56□□□□□ -1.84
HDAC8-206ENST00000373571 KRTAP5-1Q6L8H4 278 aa3.53□□□□□ -1.84
HDAC8-206ENST00000373571 KRTAP4-4Q9BYR3 166 aa3.5□□□□□ -1.85
HDAC8-206ENST00000373571 AHNAK2Q8IVF2 5795 aa3.47□□□□□ -1.85
HDAC8-206ENST00000373571 KRTAP5-10Q6L8G5 202 aa3.44□□□□□ -1.86
HDAC8-206ENST00000373571 LCE1CQ5T751 118 aa3.42□□□□□ -1.86
HDAC8-206ENST00000373571 KRTAP5-7Q6L8G8 165 aa3.36□□□□□ -1.87
HDAC8-206ENST00000373571 KRTAP5-8O75690 187 aa3.22□□□□□ -1.89
HDAC8-206ENST00000373571 KRTAP21-2Q3LI59 83 aa3.19□□□□□ -1.9
HDAC8-206ENST00000373571 AHNAKQ09666 5890 aaKnown RBP2.94□□□□□ -1.94
HDAC8-206ENST00000373571 MUC5BQ9HC84 5762 aaPredicted RBP2.88□□□□□ -1.95
HDAC8-206ENST00000373571 KRTAP21-1Q3LI58 79 aa2.73□□□□□ -1.97
HDAC8-206ENST00000373571 MUC19Q7Z5P9 8384 aa2.64□□□□□ -1.99
HDAC8-206ENST00000373571 PHGR1C9JFL3 82 aa2.55□□□□□ -2
HDAC8-206ENST00000373571 LCE1FQ5T754 118 aa2.44□□□□□ -2.02
HDAC8-206ENST00000373571 MUC16Q8WXI7 14507 aa1.72□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 447 ms